RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 SLC12A7Q9Y666 1083 aa16.81■□□□□ 0.28
HDAC6-214ENST00000465269 ZFP37Q9Y6Q3 630 aaPredicted RBP16.81■□□□□ 0.28
HDAC6-214ENST00000465269 CHURC1-FNTBB4DL54 471 aa16.8■□□□□ 0.28
HDAC6-214ENST00000465269 ADAM12O43184 909 aa16.8■□□□□ 0.28
HDAC6-214ENST00000465269 STBD1O95210 358 aa16.8■□□□□ 0.28
HDAC6-214ENST00000465269 CYP3A4P08684 503 aa16.8■□□□□ 0.28
HDAC6-214ENST00000465269 GSPT1P15170 499 aaKnown RBP16.8■□□□□ 0.28
HDAC6-214ENST00000465269 HOXA11P31270 313 aaPredicted RBP16.8■□□□□ 0.28
HDAC6-214ENST00000465269 FNTBP49356 437 aa16.8■□□□□ 0.28
HDAC6-214ENST00000465269 PFKPQ01813 784 aa16.8■□□□□ 0.28
HDAC6-214ENST00000465269 SATB1Q01826 763 aa16.8■□□□□ 0.28
HDAC6-214ENST00000465269 ADCY1Q08828 1119 aa16.8■□□□□ 0.28
HDAC6-214ENST00000465269 IL31Q6EBC2 164 aa16.8■□□□□ 0.28
HDAC6-214ENST00000465269 FUT10Q6P4F1 479 aa16.8■□□□□ 0.28
HDAC6-214ENST00000465269 RSPO2Q6UXX9 243 aaPredicted RBP16.8■□□□□ 0.28
HDAC6-214ENST00000465269 ZNF852Q6ZMS4 543 aa16.8■□□□□ 0.28
HDAC6-214ENST00000465269 NPAS3Q8IXF0 933 aa16.8■□□□□ 0.28
HDAC6-214ENST00000465269 SMC5Q8IY18 1101 aa16.8■□□□□ 0.28
HDAC6-214ENST00000465269 CELF5Q8N6W0 485 aaKnown RBP16.8■□□□□ 0.28
HDAC6-214ENST00000465269 LENG9Q96B70 501 aa16.8■□□□□ 0.28
HDAC6-214ENST00000465269 APOL6Q9BWW8 343 aa16.8■□□□□ 0.28
HDAC6-214ENST00000465269 EIF2AQ9BY44 585 aaKnown RBP16.8■□□□□ 0.28
HDAC6-214ENST00000465269 UNC45AQ9H3U1 944 aa16.8■□□□□ 0.28
HDAC6-214ENST00000465269 IFT122Q9HBG6 1241 aa16.8■□□□□ 0.28
HDAC6-214ENST00000465269 KANSL3Q9P2N6 904 aa16.8■□□□□ 0.28
HDAC6-214ENST00000465269 SMG1Q96Q15 3661 aaKnown RBP16.8■□□□□ 0.28
HDAC6-214ENST00000465269 IGKV6-21A0A0C4DH24 114 aa16.79■□□□□ 0.28
HDAC6-214ENST00000465269 ARL5CA6NH57 179 aa16.79■□□□□ 0.28
HDAC6-214ENST00000465269 NRG2O14511 850 aaPredicted RBP16.79■□□□□ 0.28
HDAC6-214ENST00000465269 SHC2P98077 582 aa16.79■□□□□ 0.28
HDAC6-214ENST00000465269 NUCB1Q02818 461 aa16.79■□□□□ 0.28
HDAC6-214ENST00000465269 DSC1Q08554 894 aa16.79■□□□□ 0.28
HDAC6-214ENST00000465269 FUT2Q10981 343 aa16.79■□□□□ 0.28
HDAC6-214ENST00000465269 RTP2Q5QGT7 225 aa16.79■□□□□ 0.28
HDAC6-214ENST00000465269 HEATR6Q6AI08 1181 aaKnown RBP16.79■□□□□ 0.28
HDAC6-214ENST00000465269 PPP1R18Q6NYC8 613 aa16.79■□□□□ 0.28
HDAC6-214ENST00000465269 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.79■□□□□ 0.28
HDAC6-214ENST00000465269 MCRS1Q96EZ8 462 aa16.79■□□□□ 0.28
HDAC6-214ENST00000465269 MBOAT7Q96N66 472 aa16.79■□□□□ 0.28
HDAC6-214ENST00000465269 FAM126AQ9BYI3 521 aaPredicted RBP16.79■□□□□ 0.28
HDAC6-214ENST00000465269 FBXW11Q9UKB1 542 aa16.79■□□□□ 0.28
HDAC6-214ENST00000465269 RBM8AQ9Y5S9 174 aaKnown RBP16.79■□□□□ 0.28
HDAC6-214ENST00000465269 LOC400499M0QZD8 3231 aa16.78■□□□□ 0.28
HDAC6-214ENST00000465269 CNTNAP2Q9UHC6 1331 aa16.78■□□□□ 0.28
HDAC6-214ENST00000465269 NCAM2O15394 837 aa16.78■□□□□ 0.28
HDAC6-214ENST00000465269 LRP3O75074 770 aa16.78■□□□□ 0.28
HDAC6-214ENST00000465269 IGHDP01880 384 aa16.78■□□□□ 0.28
HDAC6-214ENST00000465269 C8AP07357 584 aa16.78■□□□□ 0.28
HDAC6-214ENST00000465269 ITGA4P13612 1032 aa16.78■□□□□ 0.28
HDAC6-214ENST00000465269 SPINK2P20155 84 aa16.78■□□□□ 0.28
HDAC6-214ENST00000465269 GAS6Q14393 721 aa16.78■□□□□ 0.28
HDAC6-214ENST00000465269 GRM2Q14416 872 aa16.78■□□□□ 0.28
HDAC6-214ENST00000465269 PPM1LQ5SGD2 360 aa16.78■□□□□ 0.28
HDAC6-214ENST00000465269 PLA2G4FQ68DD2 849 aa16.78■□□□□ 0.28
HDAC6-214ENST00000465269 TANGO2Q6ICL3 276 aa16.78■□□□□ 0.28
HDAC6-214ENST00000465269 ZNF410Q86VK4 478 aa16.78■□□□□ 0.28
HDAC6-214ENST00000465269 HASPINQ8TF76 798 aa16.78■□□□□ 0.28
HDAC6-214ENST00000465269 MAP4K1Q92918 833 aa16.78■□□□□ 0.28
HDAC6-214ENST00000465269 NELL2Q99435 816 aa16.78■□□□□ 0.28
HDAC6-214ENST00000465269 INO80BQ9C086 356 aaPredicted RBP16.78■□□□□ 0.28
HDAC6-214ENST00000465269 CHRDQ9H2X0 955 aa16.78■□□□□ 0.28
HDAC6-214ENST00000465269 BMP2KQ9NSY1 1161 aaPredicted RBP16.78■□□□□ 0.28
HDAC6-214ENST00000465269 BARHL2Q9NY43 387 aa16.78■□□□□ 0.28
HDAC6-214ENST00000465269 FNIP2Q9P278 1114 aa16.78■□□□□ 0.28
HDAC6-214ENST00000465269 LAMA5O15230 3695 aa16.78■□□□□ 0.28
HDAC6-214ENST00000465269 TM4SF5O14894 197 aa16.77■□□□□ 0.28
HDAC6-214ENST00000465269 MSH4O15457 936 aa16.77■□□□□ 0.28
HDAC6-214ENST00000465269 EDIL3O43854 480 aa16.77■□□□□ 0.28
HDAC6-214ENST00000465269 SRGAP2CP0DJJ0 459 aa16.77■□□□□ 0.28
HDAC6-214ENST00000465269 MCM5P33992 734 aa16.77■□□□□ 0.28
HDAC6-214ENST00000465269 DNM2P50570 870 aa16.77■□□□□ 0.28
HDAC6-214ENST00000465269 SETQ01105 290 aaPredicted RBP16.77■□□□□ 0.28
HDAC6-214ENST00000465269 USP41Q3LFD5 358 aa16.77■□□□□ 0.28
HDAC6-214ENST00000465269 AASDHQ4L235 1098 aaPredicted RBP16.77■□□□□ 0.28
HDAC6-214ENST00000465269 ZNF579Q8NAF0 562 aaKnown RBP16.77■□□□□ 0.28
HDAC6-214ENST00000465269 CLSTN3Q9BQT9 956 aa16.77■□□□□ 0.28
HDAC6-214ENST00000465269 PAAF1Q9BRP4 392 aa16.77■□□□□ 0.28
HDAC6-214ENST00000465269 LMAN1LQ9HAT1 526 aa16.77■□□□□ 0.28
HDAC6-214ENST00000465269 C2orf42Q9NWW7 574 aa16.77■□□□□ 0.28
HDAC6-214ENST00000465269 DNMT3BQ9UBC3 853 aaKnown RBP16.77■□□□□ 0.28
HDAC6-214ENST00000465269 IPPQ9Y573 584 aa16.77■□□□□ 0.28
HDAC6-214ENST00000465269 DDX11L8A8MPP1 907 aa16.76■□□□□ 0.27
HDAC6-214ENST00000465269 CHMLP26374 656 aa16.76■□□□□ 0.27
HDAC6-214ENST00000465269 LIFRP42702 1097 aa16.76■□□□□ 0.27
HDAC6-214ENST00000465269 NRLP54845 237 aa16.76■□□□□ 0.27
HDAC6-214ENST00000465269 SLC5A9Q2M3M2 681 aa16.76■□□□□ 0.27
HDAC6-214ENST00000465269 LIN9Q5TKA1 542 aa16.76■□□□□ 0.27
HDAC6-214ENST00000465269 UNQ6494/PRO21346Q6UXR6 183 aa16.76■□□□□ 0.27
HDAC6-214ENST00000465269 FAM160A2Q8N612 972 aaPredicted RBP16.76■□□□□ 0.27
HDAC6-214ENST00000465269 SLC7A14Q8TBB6 771 aa16.76■□□□□ 0.27
HDAC6-214ENST00000465269 CPB2Q96IY4 423 aa16.76■□□□□ 0.27
HDAC6-214ENST00000465269 TMEM87BQ96K49 555 aa16.76■□□□□ 0.27
HDAC6-214ENST00000465269 COLEC11Q9BWP8 271 aa16.76■□□□□ 0.27
HDAC6-214ENST00000465269 NIFKQ9BYG3 293 aaKnown RBP16.76■□□□□ 0.27
HDAC6-214ENST00000465269 SMOC1Q9H4F8 434 aa16.76■□□□□ 0.27
HDAC6-214ENST00000465269 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.76■□□□□ 0.27
HDAC6-214ENST00000465269 TDRD15B5MCY1 1934 aaKnown RBP16.75■□□□□ 0.27
HDAC6-214ENST00000465269 GAS7O60861 476 aa16.75■□□□□ 0.27
HDAC6-214ENST00000465269 MAFO75444 373 aaPredicted RBP16.75■□□□□ 0.27
HDAC6-214ENST00000465269 NPEPPSP55786 919 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms