RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 HACE1Q8IYU2 909 aa16.28■□□□□ 0.2
MCF2L-220ENST00000464800 RMDN1Q96DB5 314 aa16.28■□□□□ 0.2
MCF2L-220ENST00000464800 CPB2Q96IY4 423 aa16.28■□□□□ 0.2
MCF2L-220ENST00000464800 B3GALT6Q96L58 329 aa16.28■□□□□ 0.2
MCF2L-220ENST00000464800 APOL6Q9BWW8 343 aa16.28■□□□□ 0.2
MCF2L-220ENST00000464800 PRKD2Q9BZL6 878 aa16.28■□□□□ 0.2
MCF2L-220ENST00000464800 TRIM6Q9C030 488 aaPredicted RBP16.28■□□□□ 0.2
MCF2L-220ENST00000464800 CSRNP2Q9H175 543 aa16.28■□□□□ 0.2
MCF2L-220ENST00000464800 RNF39Q9H2S5 420 aa16.28■□□□□ 0.2
MCF2L-220ENST00000464800 CHST7Q9NS84 486 aa16.28■□□□□ 0.2
MCF2L-220ENST00000464800 HES2Q9Y543 173 aa16.28■□□□□ 0.2
MCF2L-220ENST00000464800 PATJQ8NI35 1801 aa16.28■□□□□ 0.2
MCF2L-220ENST00000464800 CCDC194A0A1B0GVG4 234 aa16.27■□□□□ 0.2
MCF2L-220ENST00000464800 ANHXE9PGG2 379 aa16.27■□□□□ 0.2
MCF2L-220ENST00000464800 TGM5O43548 720 aa16.27■□□□□ 0.2
MCF2L-220ENST00000464800 GCFC2P16383 781 aaKnown RBP16.27■□□□□ 0.2
MCF2L-220ENST00000464800 PTENP60484 403 aa16.27■□□□□ 0.2
MCF2L-220ENST00000464800 TFDP1Q14186 410 aa16.27■□□□□ 0.2
MCF2L-220ENST00000464800 MXD4Q14582 209 aaPredicted RBP16.27■□□□□ 0.2
MCF2L-220ENST00000464800 USP41Q3LFD5 358 aa16.27■□□□□ 0.2
MCF2L-220ENST00000464800 XKR9Q5GH70 373 aa16.27■□□□□ 0.2
MCF2L-220ENST00000464800 FUT10Q6P4F1 479 aa16.27■□□□□ 0.2
MCF2L-220ENST00000464800 DCLRE1AQ6PJP8 1040 aa16.27■□□□□ 0.2
MCF2L-220ENST00000464800 DGLUCYQ7Z3D6 616 aa16.27■□□□□ 0.2
MCF2L-220ENST00000464800 NEK8Q86SG6 692 aa16.27■□□□□ 0.2
MCF2L-220ENST00000464800 GLYCTKQ8IVS8 523 aa16.27■□□□□ 0.2
MCF2L-220ENST00000464800 GPR65Q8IYL9 337 aa16.27■□□□□ 0.2
MCF2L-220ENST00000464800 AIFM3Q96NN9 605 aa16.27■□□□□ 0.2
MCF2L-220ENST00000464800 SLC2A4RGQ9NR83 387 aa16.27■□□□□ 0.2
MCF2L-220ENST00000464800 MIOSQ9NXC5 875 aa16.27■□□□□ 0.2
MCF2L-220ENST00000464800 FNIP2Q9P278 1114 aa16.27■□□□□ 0.2
MCF2L-220ENST00000464800 GIT1Q9Y2X7 761 aa16.27■□□□□ 0.2
MCF2L-220ENST00000464800 NUMBLQ9Y6R0 609 aa16.27■□□□□ 0.2
MCF2L-220ENST00000464800 INO80B-WBP1J3KQ70 363 aa16.26■□□□□ 0.19
MCF2L-220ENST00000464800 TBX3O15119 743 aa16.26■□□□□ 0.19
MCF2L-220ENST00000464800 SP9P0CG40 484 aa16.26■□□□□ 0.19
MCF2L-220ENST00000464800 TOB2Q14106 344 aaPredicted RBP16.26■□□□□ 0.19
MCF2L-220ENST00000464800 EPHA7Q15375 998 aa16.26■□□□□ 0.19
MCF2L-220ENST00000464800 NCAPH2Q6IBW4 605 aa16.26■□□□□ 0.19
MCF2L-220ENST00000464800 PPP4R3AQ6IN85 833 aa16.26■□□□□ 0.19
MCF2L-220ENST00000464800 CPLX2Q6PUV4 134 aaKnown RBP16.26■□□□□ 0.19
MCF2L-220ENST00000464800 C1orf210Q8IVY1 113 aa16.26■□□□□ 0.19
MCF2L-220ENST00000464800 PJA1Q8NG27 643 aa16.26■□□□□ 0.19
MCF2L-220ENST00000464800 GPR62Q9BZJ7 368 aa16.26■□□□□ 0.19
MCF2L-220ENST00000464800 NXF3Q9H4D5 531 aaKnown RBP16.26■□□□□ 0.19
MCF2L-220ENST00000464800 ZSWIM4Q9H7M6 989 aa16.26■□□□□ 0.19
MCF2L-220ENST00000464800 RGL1Q9NZL6 768 aa16.26■□□□□ 0.19
MCF2L-220ENST00000464800 DLGAP2Q9P1A6 1054 aa16.26■□□□□ 0.19
MCF2L-220ENST00000464800 ADAM28Q9UKQ2 775 aa16.26■□□□□ 0.19
MCF2L-220ENST00000464800 ZFP37Q9Y6Q3 630 aaPredicted RBP16.26■□□□□ 0.19
MCF2L-220ENST00000464800 ZMYM2Q9UBW7 1377 aa16.26■□□□□ 0.19
MCF2L-220ENST00000464800 DOCK6Q96HP0 2047 aa16.25■□□□□ 0.19
MCF2L-220ENST00000464800 MARCH6O60337 910 aa16.25■□□□□ 0.19
MCF2L-220ENST00000464800 CCNT1O60563 726 aaKnown RBP16.25■□□□□ 0.19
MCF2L-220ENST00000464800 ZMYND10O75800 440 aa16.25■□□□□ 0.19
MCF2L-220ENST00000464800 RPL17P18621 184 aaKnown RBP16.25■□□□□ 0.19
MCF2L-220ENST00000464800 FSHRP23945 695 aa16.25■□□□□ 0.19
MCF2L-220ENST00000464800 CYP4A11Q02928 519 aa16.25■□□□□ 0.19
MCF2L-220ENST00000464800 MBTD1Q05BQ5 628 aa16.25■□□□□ 0.19
MCF2L-220ENST00000464800 GRIK3Q13003 919 aa16.25■□□□□ 0.19
MCF2L-220ENST00000464800 CTTNQ14247 550 aaKnown RBP16.25■□□□□ 0.19
MCF2L-220ENST00000464800 RUFY3Q7L099 469 aa16.25■□□□□ 0.19
MCF2L-220ENST00000464800 DYDC2Q96IM9 177 aa16.25■□□□□ 0.19
MCF2L-220ENST00000464800 SHDQ96IW2 340 aa16.25■□□□□ 0.19
MCF2L-220ENST00000464800 NAP1L4Q99733 375 aaKnown RBP16.25■□□□□ 0.19
MCF2L-220ENST00000464800 FOXQ1Q9C009 403 aa16.25■□□□□ 0.19
MCF2L-220ENST00000464800 KCNJ14Q9UNX9 436 aa16.25■□□□□ 0.19
MCF2L-220ENST00000464800 WDR87Q6ZQQ6 2873 aa16.25■□□□□ 0.19
MCF2L-220ENST00000464800 OTOGLQ3ZCN5 2332 aa16.25■□□□□ 0.19
MCF2L-220ENST00000464800 DMXL1Q9Y485 3027 aa16.25■□□□□ 0.19
MCF2L-220ENST00000464800 MED19A0JLT2 244 aaPredicted RBP16.24■□□□□ 0.19
MCF2L-220ENST00000464800 REC8O95072 547 aa16.24■□□□□ 0.19
MCF2L-220ENST00000464800 ARF4P18085 180 aaPredicted RBP16.24■□□□□ 0.19
MCF2L-220ENST00000464800 AKAP5P24588 427 aa16.24■□□□□ 0.19
MCF2L-220ENST00000464800 POU5F1BQ06416 359 aa16.24■□□□□ 0.19
MCF2L-220ENST00000464800 LILRA6Q6PI73 481 aa16.24■□□□□ 0.19
MCF2L-220ENST00000464800 IFNLR1Q8IU57 520 aaPredicted RBP16.24■□□□□ 0.19
MCF2L-220ENST00000464800 RUBCNQ92622 972 aa16.24■□□□□ 0.19
MCF2L-220ENST00000464800 HAS1Q92839 578 aa16.24■□□□□ 0.19
MCF2L-220ENST00000464800 ZNF274Q96GC6 653 aaPredicted RBP16.24■□□□□ 0.19
MCF2L-220ENST00000464800 PHF20Q9BVI0 1012 aa16.24■□□□□ 0.19
MCF2L-220ENST00000464800 XPNPEP1Q9NQW7 623 aa16.24■□□□□ 0.19
MCF2L-220ENST00000464800 CACNA1IQ9P0X4 2223 aa16.23■□□□□ 0.19
MCF2L-220ENST00000464800 SF3B1O75533 1304 aaKnown RBP eCLIP16.23■□□□□ 0.19
MCF2L-220ENST00000464800 ZBTB39O15060 712 aa16.23■□□□□ 0.19
MCF2L-220ENST00000464800 TADA2AO75478 443 aa16.23■□□□□ 0.19
MCF2L-220ENST00000464800 STARD6P59095 220 aa16.23■□□□□ 0.19
MCF2L-220ENST00000464800 STK3Q13188 491 aa16.23■□□□□ 0.19
MCF2L-220ENST00000464800 CAPSQ13938 189 aa16.23■□□□□ 0.19
MCF2L-220ENST00000464800 HSP90AA2PQ14568 343 aaPredicted RBP16.23■□□□□ 0.19
MCF2L-220ENST00000464800 PUM1Q14671 1186 aaKnown RBP eCLIP16.23■□□□□ 0.19
MCF2L-220ENST00000464800 AMHR2Q16671 573 aa16.23■□□□□ 0.19
MCF2L-220ENST00000464800 LIN9Q5TKA1 542 aa16.23■□□□□ 0.19
MCF2L-220ENST00000464800 SLC27A1Q6PCB7 646 aa16.23■□□□□ 0.19
MCF2L-220ENST00000464800 POTEGQ6S5H5 508 aa16.23■□□□□ 0.19
MCF2L-220ENST00000464800 PRSS55Q6UWB4 352 aaPredicted RBP16.23■□□□□ 0.19
MCF2L-220ENST00000464800 PIK3AP1Q6ZUJ8 805 aa16.23■□□□□ 0.19
MCF2L-220ENST00000464800 POTEDQ86YR6 584 aa16.23■□□□□ 0.19
MCF2L-220ENST00000464800 TPH2Q8IWU9 490 aa16.23■□□□□ 0.19
MCF2L-220ENST00000464800 SLFN12Q8IYM2 578 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms