RNA–Protein interactions for RNA: ENST00000464616.6

GARNL3-213, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-213ENST00000464616 REXO4Q9GZR2 422 aaKnown RBP4.42□□□□□ -1.7
GARNL3-213ENST00000464616 SERHL2Q9H4I8 314 aa4.42□□□□□ -1.7
GARNL3-213ENST00000464616 SPTLC3Q9NUV7 552 aa4.42□□□□□ -1.7
GARNL3-213ENST00000464616 FANCLQ9NW38 375 aa4.42□□□□□ -1.7
GARNL3-213ENST00000464616 CENPVL1A0A0U1RR11 272 aa4.41□□□□□ -1.7
GARNL3-213ENST00000464616 GRXCR1A8MXD5 290 aa4.41□□□□□ -1.7
GARNL3-213ENST00000464616 AHRRA9YTQ3 701 aa4.41□□□□□ -1.7
GARNL3-213ENST00000464616 LPXNO60711 386 aa4.41□□□□□ -1.7
GARNL3-213ENST00000464616 SEC24DO94855 1032 aaPredicted RBP4.41□□□□□ -1.7
GARNL3-213ENST00000464616 FKBP9O95302 570 aa4.41□□□□□ -1.7
GARNL3-213ENST00000464616 CFBP00751 764 aa4.41□□□□□ -1.7
GARNL3-213ENST00000464616 POU3F2P20265 443 aaPredicted RBP4.41□□□□□ -1.7
GARNL3-213ENST00000464616 CD38P28907 300 aa4.41□□□□□ -1.7
GARNL3-213ENST00000464616 LSSP48449 732 aa4.41□□□□□ -1.7
GARNL3-213ENST00000464616 PHC1P78364 1004 aa4.41□□□□□ -1.7
GARNL3-213ENST00000464616 SPDYE7PQ495Y7 208 aa4.41□□□□□ -1.7
GARNL3-213ENST00000464616 FKBP9P1Q75LS8 142 aa4.41□□□□□ -1.7
GARNL3-213ENST00000464616 MSL3Q8N5Y2 521 aaKnown RBP4.41□□□□□ -1.7
GARNL3-213ENST00000464616 BEND2Q8NDZ0 799 aa4.41□□□□□ -1.7
GARNL3-213ENST00000464616 ZFP28Q8NHY6 868 aa4.41□□□□□ -1.7
GARNL3-213ENST00000464616 ZCRB1Q8TBF4 217 aaKnown RBP4.41□□□□□ -1.7
GARNL3-213ENST00000464616 LSM14BQ9BX40 385 aaKnown RBP4.41□□□□□ -1.7
GARNL3-213ENST00000464616 ENKD1Q9H0I2 346 aa4.41□□□□□ -1.7
GARNL3-213ENST00000464616 RSAD1Q9HA92 442 aa4.41□□□□□ -1.7
GARNL3-213ENST00000464616 PRSS50Q9UI38 385 aa4.41□□□□□ -1.7
GARNL3-213ENST00000464616 MASP2O00187 686 aa4.4□□□□□ -1.71
GARNL3-213ENST00000464616 KIAA0355O15063 1070 aa4.4□□□□□ -1.71
GARNL3-213ENST00000464616 TGM5O43548 720 aa4.4□□□□□ -1.71
GARNL3-213ENST00000464616 ITGA10O75578 1167 aa4.4□□□□□ -1.71
GARNL3-213ENST00000464616 HKR1P10072 659 aa4.4□□□□□ -1.71
GARNL3-213ENST00000464616 PROZP22891 400 aa4.4□□□□□ -1.71
GARNL3-213ENST00000464616 DDX6P26196 483 aaKnown RBP eCLIP4.4□□□□□ -1.71
GARNL3-213ENST00000464616 ADRA1BP35368 520 aa4.4□□□□□ -1.71
GARNL3-213ENST00000464616 ZEB1P37275 1124 aaPredicted RBP4.4□□□□□ -1.71
GARNL3-213ENST00000464616 MEF2AQ02078 507 aaPredicted RBP4.4□□□□□ -1.71
GARNL3-213ENST00000464616 PCBP1Q15365 356 aaKnown RBP eCLIP4.4□□□□□ -1.71
GARNL3-213ENST00000464616 TERF2Q15554 542 aa4.4□□□□□ -1.71
GARNL3-213ENST00000464616 CCDC142Q17RM4 750 aa4.4□□□□□ -1.71
GARNL3-213ENST00000464616 BROXQ5VW32 411 aa4.4□□□□□ -1.71
GARNL3-213ENST00000464616 OLFML1Q6UWY5 402 aa4.4□□□□□ -1.71
GARNL3-213ENST00000464616 JAZF1Q86VZ6 243 aa4.4□□□□□ -1.71
GARNL3-213ENST00000464616 ARHGEF19Q8IW93 802 aa4.4□□□□□ -1.71
GARNL3-213ENST00000464616 LILRA3Q8N6C8 439 aaPredicted RBP4.4□□□□□ -1.71
GARNL3-213ENST00000464616 CPEB3Q8NE35 698 aaKnown RBP4.4□□□□□ -1.71
GARNL3-213ENST00000464616 MDM1Q8TC05 714 aa4.4□□□□□ -1.71
GARNL3-213ENST00000464616 LEO1Q8WVC0 666 aaPredicted RBP4.4□□□□□ -1.71
GARNL3-213ENST00000464616 USP7Q93009 1102 aa4.4□□□□□ -1.71
GARNL3-213ENST00000464616 PUS7Q96PZ0 661 aaKnown RBP4.4□□□□□ -1.71
GARNL3-213ENST00000464616 FDXACB1Q9BRP7 624 aaPredicted RBP4.4□□□□□ -1.71
GARNL3-213ENST00000464616 MTFR1LQ9H019 292 aa4.4□□□□□ -1.71
GARNL3-213ENST00000464616 ADARB2Q9NS39 739 aaKnown RBP4.4□□□□□ -1.71
GARNL3-213ENST00000464616 TESQ9UGI8 421 aaKnown RBP4.4□□□□□ -1.71
GARNL3-213ENST00000464616 EVLQ9UI08 416 aaPredicted RBP4.4□□□□□ -1.71
GARNL3-213ENST00000464616 PLAAQ9Y263 795 aa4.4□□□□□ -1.71
GARNL3-213ENST00000464616 ATP11BQ9Y2G3 1177 aa4.4□□□□□ -1.71
GARNL3-213ENST00000464616 USP15Q9Y4E8 981 aaPredicted RBP4.4□□□□□ -1.71
GARNL3-213ENST00000464616 PPP2R3BQ9Y5P8 575 aa4.4□□□□□ -1.71
GARNL3-213ENST00000464616 HS3ST4Q9Y661 456 aa4.4□□□□□ -1.71
GARNL3-213ENST00000464616 A0A1W2PR48 441 aa4.39□□□□□ -1.71
GARNL3-213ENST00000464616 LCHNA4D1U4 455 aa4.39□□□□□ -1.71
GARNL3-213ENST00000464616 ANKRD62A6NC57 917 aa4.39□□□□□ -1.71
GARNL3-213ENST00000464616 UNC119BA6NIH7 251 aa4.39□□□□□ -1.71
GARNL3-213ENST00000464616 TMEM200CA6NKL6 621 aa4.39□□□□□ -1.71
GARNL3-213ENST00000464616 TBKBP1A7MCY6 615 aa4.39□□□□□ -1.71
GARNL3-213ENST00000464616 LEFTY2O00292 366 aa4.39□□□□□ -1.71
GARNL3-213ENST00000464616 PHF2O75151 1096 aa4.39□□□□□ -1.71
GARNL3-213ENST00000464616 GASTP01350 101 aa4.39□□□□□ -1.71
GARNL3-213ENST00000464616 IBSPP21815 317 aaPredicted RBP4.39□□□□□ -1.71
GARNL3-213ENST00000464616 CXCR5P32302 372 aa4.39□□□□□ -1.71
GARNL3-213ENST00000464616 PTPN7P35236 360 aa4.39□□□□□ -1.71
GARNL3-213ENST00000464616 BLOC1S1P78537 153 aa4.39□□□□□ -1.71
GARNL3-213ENST00000464616 FAM189BP81408 668 aa4.39□□□□□ -1.71
GARNL3-213ENST00000464616 COL10A1Q03692 680 aa4.39□□□□□ -1.71
GARNL3-213ENST00000464616 ATP13A4Q4VNC1 1196 aa4.39□□□□□ -1.71
GARNL3-213ENST00000464616 DRICH1Q6PGQ1 229 aaPredicted RBP4.39□□□□□ -1.71
GARNL3-213ENST00000464616 SYCE2Q6PIF2 218 aa4.39□□□□□ -1.71
GARNL3-213ENST00000464616 ADGRG3Q86Y34 549 aa4.39□□□□□ -1.71
GARNL3-213ENST00000464616 SNX33Q8WV41 574 aa4.39□□□□□ -1.71
GARNL3-213ENST00000464616 NELL1Q92832 810 aa4.39□□□□□ -1.71
GARNL3-213ENST00000464616 SLC5A5Q92911 643 aa4.39□□□□□ -1.71
GARNL3-213ENST00000464616 MFSD3Q96ES6 412 aa4.39□□□□□ -1.71
GARNL3-213ENST00000464616 RNPC3Q96LT9 517 aaKnown RBP4.39□□□□□ -1.71
GARNL3-213ENST00000464616 UHRF1Q96T88 793 aaPredicted RBP4.39□□□□□ -1.71
GARNL3-213ENST00000464616 TARS2Q9BW92 718 aaKnown RBP4.39□□□□□ -1.71
GARNL3-213ENST00000464616 ZBTB21Q9ULJ3 1066 aa4.39□□□□□ -1.71
GARNL3-213ENST00000464616 INSL6Q9Y581 213 aa4.39□□□□□ -1.71
GARNL3-213ENST00000464616 NOX1Q9Y5S8 564 aa4.39□□□□□ -1.71
GARNL3-213ENST00000464616 MRPL42Q9Y6G3 142 aaKnown RBP4.39□□□□□ -1.71
GARNL3-213ENST00000464616 ZMYM3Q14202 1370 aa4.39□□□□□ -1.71
GARNL3-213ENST00000464616 GRID2IPA4D2P6 1211 aa4.38□□□□□ -1.71
GARNL3-213ENST00000464616 LPLP06858 475 aa4.38□□□□□ -1.71
GARNL3-213ENST00000464616 BMPR1AP36894 532 aa4.38□□□□□ -1.71
GARNL3-213ENST00000464616 MANFP55145 182 aaKnown RBP4.38□□□□□ -1.71
GARNL3-213ENST00000464616 LGALS4P56470 323 aa4.38□□□□□ -1.71
GARNL3-213ENST00000464616 PER3P56645 1201 aa4.38□□□□□ -1.71
GARNL3-213ENST00000464616 UGT8Q16880 541 aa4.38□□□□□ -1.71
GARNL3-213ENST00000464616 C19orf54Q5BKX5 351 aa4.38□□□□□ -1.71
GARNL3-213ENST00000464616 EGFLAMQ63HQ2 1017 aa4.38□□□□□ -1.71
GARNL3-213ENST00000464616 ARMC6Q6NXE6 501 aa4.38□□□□□ -1.71
GARNL3-213ENST00000464616 Q6YL49 198 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms