RNA–Protein interactions for RNA: ENST00000464408.3

ALMS1-202, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 5

Gene ALMS1, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-202ENST00000464408 URODP06132 367 aa16.08■□□□□ 0.16
ALMS1-202ENST00000464408 TCF15Q12870 199 aa16.08■□□□□ 0.16
ALMS1-202ENST00000464408 ECM1Q16610 540 aa16.08■□□□□ 0.16
ALMS1-202ENST00000464408 ATAT1Q5SQI0 421 aa16.08■□□□□ 0.16
ALMS1-202ENST00000464408 KIAA0319Q5VV43 1072 aa16.08■□□□□ 0.16
ALMS1-202ENST00000464408 ERICH6BQ5W0A0 696 aa16.08■□□□□ 0.16
ALMS1-202ENST00000464408 SLC27A1Q6PCB7 646 aa16.08■□□□□ 0.16
ALMS1-202ENST00000464408 GPR149Q86SP6 731 aa16.08■□□□□ 0.16
ALMS1-202ENST00000464408 PPFIBP1Q86W92 1011 aa16.08■□□□□ 0.16
ALMS1-202ENST00000464408 TDRD5Q8NAT2 981 aaKnown RBP16.08■□□□□ 0.16
ALMS1-202ENST00000464408 RPS6KC1Q96S38 1066 aa16.08■□□□□ 0.16
ALMS1-202ENST00000464408 KIF2CQ99661 725 aa16.08■□□□□ 0.16
ALMS1-202ENST00000464408 EMILIN2Q9BXX0 1053 aa16.08■□□□□ 0.16
ALMS1-202ENST00000464408 SFXN1Q9H9B4 322 aa16.08■□□□□ 0.16
ALMS1-202ENST00000464408 TUFT1Q9NNX1 390 aa16.08■□□□□ 0.16
ALMS1-202ENST00000464408 DOCK8Q8NF50 2099 aa16.07■□□□□ 0.16
ALMS1-202ENST00000464408 USP34Q70CQ2 3546 aa16.07■□□□□ 0.16
ALMS1-202ENST00000464408 A0A1B0GUA9 196 aa16.07■□□□□ 0.16
ALMS1-202ENST00000464408 SPDYE4A6NLX3 237 aa16.07■□□□□ 0.16
ALMS1-202ENST00000464408 TEX28O15482 410 aa16.07■□□□□ 0.16
ALMS1-202ENST00000464408 OR52Z1P0C646 297 aa16.07■□□□□ 0.16
ALMS1-202ENST00000464408 SPATA31D3P0C874 917 aa16.07■□□□□ 0.16
ALMS1-202ENST00000464408 XRCC6P12956 609 aaKnown RBP eCLIP16.07■□□□□ 0.16
ALMS1-202ENST00000464408 GLUD2P49448 558 aa16.07■□□□□ 0.16
ALMS1-202ENST00000464408 NCBP1Q09161 790 aaKnown RBP16.07■□□□□ 0.16
ALMS1-202ENST00000464408 SAFBQ15424 915 aaKnown RBP eCLIP16.07■□□□□ 0.16
ALMS1-202ENST00000464408 CDCA2Q69YH5 1023 aaPredicted RBP16.07■□□□□ 0.16
ALMS1-202ENST00000464408 SPATA31D4Q6ZUB0 917 aa16.07■□□□□ 0.16
ALMS1-202ENST00000464408 PAAF1Q9BRP4 392 aa16.07■□□□□ 0.16
ALMS1-202ENST00000464408 POLR3CQ9BUI4 534 aaPredicted RBP16.07■□□□□ 0.16
ALMS1-202ENST00000464408 GPR62Q9BZJ7 368 aa16.07■□□□□ 0.16
ALMS1-202ENST00000464408 MAN1C1Q9NR34 630 aa16.07■□□□□ 0.16
ALMS1-202ENST00000464408 PARP2Q9UGN5 583 aa16.07■□□□□ 0.16
ALMS1-202ENST00000464408 SORCS3Q9UPU3 1222 aa16.07■□□□□ 0.16
ALMS1-202ENST00000464408 GIT1Q9Y2X7 761 aa16.07■□□□□ 0.16
ALMS1-202ENST00000464408 MYO15AQ9UKN7 3530 aa16.07■□□□□ 0.16
ALMS1-202ENST00000464408 VWA8A3KMH1 1905 aa16.06■□□□□ 0.16
ALMS1-202ENST00000464408 RFPL2O75678 378 aa16.06■□□□□ 0.16
ALMS1-202ENST00000464408 MTMR3Q13615 1198 aa16.06■□□□□ 0.16
ALMS1-202ENST00000464408 TTC38Q5R3I4 469 aa16.06■□□□□ 0.16
ALMS1-202ENST00000464408 PADI6Q6TGC4 694 aa16.06■□□□□ 0.16
ALMS1-202ENST00000464408 PPP4R3CPQ6ZMV5 832 aa16.06■□□□□ 0.16
ALMS1-202ENST00000464408 ZDHHC14Q8IZN3 488 aa16.06■□□□□ 0.16
ALMS1-202ENST00000464408 C4orf32Q8N8J7 132 aa16.06■□□□□ 0.16
ALMS1-202ENST00000464408 FBXO18Q8NFZ0 1043 aa16.06■□□□□ 0.16
ALMS1-202ENST00000464408 NACC1Q96RE7 527 aa16.06■□□□□ 0.16
ALMS1-202ENST00000464408 KIFC3Q9BVG8 833 aa16.06■□□□□ 0.16
ALMS1-202ENST00000464408 FOXP1Q9H334 677 aaPredicted RBP16.06■□□□□ 0.16
ALMS1-202ENST00000464408 FZD8Q9H461 694 aa16.06■□□□□ 0.16
ALMS1-202ENST00000464408 PDZD7Q9H5P4 517 aa16.06■□□□□ 0.16
ALMS1-202ENST00000464408 N4BP1O75113 896 aaKnown RBP16.05■□□□□ 0.16
ALMS1-202ENST00000464408 RPL17P18621 184 aaKnown RBP16.05■□□□□ 0.16
ALMS1-202ENST00000464408 LIG1P18858 919 aa16.05■□□□□ 0.16
ALMS1-202ENST00000464408 RPA1P27694 616 aa16.05■□□□□ 0.16
ALMS1-202ENST00000464408 AVPR2P30518 371 aa16.05■□□□□ 0.16
ALMS1-202ENST00000464408 DSG1Q02413 1049 aa16.05■□□□□ 0.16
ALMS1-202ENST00000464408 EEF1DP3Q658K8 133 aa16.05■□□□□ 0.16
ALMS1-202ENST00000464408 FUT10Q6P4F1 479 aa16.05■□□□□ 0.16
ALMS1-202ENST00000464408 GLYCTKQ8IVS8 523 aa16.05■□□□□ 0.16
ALMS1-202ENST00000464408 MCPH1Q8NEM0 835 aa16.05■□□□□ 0.16
ALMS1-202ENST00000464408 HASPINQ8TF76 798 aa16.05■□□□□ 0.16
ALMS1-202ENST00000464408 LLPHQ9BRT6 129 aaKnown RBP16.05■□□□□ 0.16
ALMS1-202ENST00000464408 CCDC113Q9H0I3 377 aa16.05■□□□□ 0.16
ALMS1-202ENST00000464408 RXFP1Q9HBX9 757 aa16.05■□□□□ 0.16
ALMS1-202ENST00000464408 CHST7Q9NS84 486 aa16.05■□□□□ 0.16
ALMS1-202ENST00000464408 FAM86C1Q9NVL1 165 aa16.05■□□□□ 0.16
ALMS1-202ENST00000464408 SNTG2Q9NY99 539 aa16.05■□□□□ 0.16
ALMS1-202ENST00000464408 STK39Q9UEW8 545 aa16.05■□□□□ 0.16
ALMS1-202ENST00000464408 ARHGEF35A5YM69 484 aa16.04■□□□□ 0.16
ALMS1-202ENST00000464408 CASTOR2A6NHX0 329 aa16.04■□□□□ 0.16
ALMS1-202ENST00000464408 ADH1AP07327 375 aa16.04■□□□□ 0.16
ALMS1-202ENST00000464408 IGFBP6P24592 240 aaPredicted RBP16.04■□□□□ 0.16
ALMS1-202ENST00000464408 TOB1P50616 345 aaPredicted RBP16.04■□□□□ 0.16
ALMS1-202ENST00000464408 GRIK3Q13003 919 aa16.04■□□□□ 0.16
ALMS1-202ENST00000464408 C8orf34Q49A92 452 aa16.04■□□□□ 0.16
ALMS1-202ENST00000464408 CCDC149Q6ZUS6 474 aa16.04■□□□□ 0.16
ALMS1-202ENST00000464408 PALB2Q86YC2 1186 aa16.04■□□□□ 0.16
ALMS1-202ENST00000464408 NOSTRINQ8IVI9 506 aa16.04■□□□□ 0.16
ALMS1-202ENST00000464408 UBALD2Q8IYN6 164 aa16.04■□□□□ 0.16
ALMS1-202ENST00000464408 PRMT7Q9NVM4 692 aaPredicted RBP16.04■□□□□ 0.16
ALMS1-202ENST00000464408 USTQ9Y2C2 406 aa16.04■□□□□ 0.16
ALMS1-202ENST00000464408 DMDP11532 3685 aa16.04■□□□□ 0.16
ALMS1-202ENST00000464408 PTGESO14684 152 aa16.03■□□□□ 0.16
ALMS1-202ENST00000464408 GLUD1P00367 558 aa16.03■□□□□ 0.16
ALMS1-202ENST00000464408 PRKCBP05771 671 aa16.03■□□□□ 0.16
ALMS1-202ENST00000464408 CYP11B2P19099 503 aa16.03■□□□□ 0.16
ALMS1-202ENST00000464408 CCT6AP40227 531 aaKnown RBP16.03■□□□□ 0.16
ALMS1-202ENST00000464408 PTPN5P54829 565 aa16.03■□□□□ 0.16
ALMS1-202ENST00000464408 PRPF4BQ13523 1007 aaKnown RBP16.03■□□□□ 0.16
ALMS1-202ENST00000464408 NAB2Q15742 525 aa16.03■□□□□ 0.16
ALMS1-202ENST00000464408 FAM187BQ17R55 369 aa16.03■□□□□ 0.16
ALMS1-202ENST00000464408 RTP2Q5QGT7 225 aa16.03■□□□□ 0.16
ALMS1-202ENST00000464408 PRSS55Q6UWB4 352 aaPredicted RBP16.03■□□□□ 0.16
ALMS1-202ENST00000464408 ZBTB8OSQ8IWT0 167 aa16.03■□□□□ 0.16
ALMS1-202ENST00000464408 HACE1Q8IYU2 909 aa16.03■□□□□ 0.16
ALMS1-202ENST00000464408 TMEM105Q8N8V8 129 aa16.03■□□□□ 0.16
ALMS1-202ENST00000464408 RIN2Q8WYP3 895 aaPredicted RBP16.03■□□□□ 0.16
ALMS1-202ENST00000464408 ZNF707Q96C28 371 aaPredicted RBP16.03■□□□□ 0.16
ALMS1-202ENST00000464408 PRIMPOLQ96LW4 560 aa16.03■□□□□ 0.16
ALMS1-202ENST00000464408 COLEC11Q9BWP8 271 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms