RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 HINFPQ9BQA5 517 aa7.73□□□□□ -1.17
CLSTN1-204ENST00000464286 MMTAG2Q9BU76 263 aaKnown RBP7.73□□□□□ -1.17
CLSTN1-204ENST00000464286 MKNK1Q9BUB5 465 aa7.73□□□□□ -1.17
CLSTN1-204ENST00000464286 CCDC28BQ9BUN5 200 aa7.73□□□□□ -1.17
CLSTN1-204ENST00000464286 AP1M1Q9BXS5 423 aa7.73□□□□□ -1.17
CLSTN1-204ENST00000464286 ECT2Q9H8V3 914 aa7.73□□□□□ -1.17
CLSTN1-204ENST00000464286 UBN1Q9NPG3 1134 aa7.73□□□□□ -1.17
CLSTN1-204ENST00000464286 ARHGEF3Q9NR81 526 aa7.73□□□□□ -1.17
CLSTN1-204ENST00000464286 MCM9Q9NXL9 1143 aa7.73□□□□□ -1.17
CLSTN1-204ENST00000464286 ZFATQ9P243 1243 aa7.73□□□□□ -1.17
CLSTN1-204ENST00000464286 LARSQ9P2J5 1176 aaKnown RBP7.73□□□□□ -1.17
CLSTN1-204ENST00000464286 PNMA2Q9UL42 364 aa7.73□□□□□ -1.17
CLSTN1-204ENST00000464286 NAV1Q8NEY1 1877 aa7.72□□□□□ -1.17
CLSTN1-204ENST00000464286 ANKRD62A6NC57 917 aa7.72□□□□□ -1.17
CLSTN1-204ENST00000464286 KLHL33A6NCF5 533 aa7.72□□□□□ -1.17
CLSTN1-204ENST00000464286 SPDYE3A6NKU9 549 aa7.72□□□□□ -1.17
CLSTN1-204ENST00000464286 GPR25O00155 361 aa7.72□□□□□ -1.17
CLSTN1-204ENST00000464286 CAND2O75155 1236 aa7.72□□□□□ -1.17
CLSTN1-204ENST00000464286 TCEA3O75764 348 aa7.72□□□□□ -1.17
CLSTN1-204ENST00000464286 SMNDC1O75940 238 aaKnown RBP eCLIP7.72□□□□□ -1.17
CLSTN1-204ENST00000464286 SNUPNO95149 360 aaKnown RBP7.72□□□□□ -1.17
CLSTN1-204ENST00000464286 EYA4O95677 639 aa7.72□□□□□ -1.17
CLSTN1-204ENST00000464286 TTLL1O95922 423 aa7.72□□□□□ -1.17
CLSTN1-204ENST00000464286 RPSAP08865 295 aaKnown RBP7.72□□□□□ -1.17
CLSTN1-204ENST00000464286 ITIH2P19823 946 aa7.72□□□□□ -1.17
CLSTN1-204ENST00000464286 HIBADHP31937 336 aaKnown RBP7.72□□□□□ -1.17
CLSTN1-204ENST00000464286 MSH2P43246 934 aa7.72□□□□□ -1.17
CLSTN1-204ENST00000464286 SLC18A1P54219 525 aa7.72□□□□□ -1.17
CLSTN1-204ENST00000464286 DYNLL1P63167 89 aaKnown RBP7.72□□□□□ -1.17
CLSTN1-204ENST00000464286 MRPS25P82663 173 aaKnown RBP7.72□□□□□ -1.17
CLSTN1-204ENST00000464286 IL9RQ01113 521 aa7.72□□□□□ -1.17
CLSTN1-204ENST00000464286 ATP2B2Q01814 1243 aa7.72□□□□□ -1.17
CLSTN1-204ENST00000464286 ARID5AQ03989 594 aa7.72□□□□□ -1.17
CLSTN1-204ENST00000464286 SF3B3Q15393 1217 aaKnown RBP7.72□□□□□ -1.17
CLSTN1-204ENST00000464286 TAF11Q15544 211 aa7.72□□□□□ -1.17
CLSTN1-204ENST00000464286 CHRNA2Q15822 529 aa7.72□□□□□ -1.17
CLSTN1-204ENST00000464286 SGSM1Q2NKQ1 1148 aa7.72□□□□□ -1.17
CLSTN1-204ENST00000464286 GALNTL6Q49A17 601 aa7.72□□□□□ -1.17
CLSTN1-204ENST00000464286 FAM47AQ5JRC9 791 aa7.72□□□□□ -1.17
CLSTN1-204ENST00000464286 MOXD1Q6UVY6 613 aa7.72□□□□□ -1.17
CLSTN1-204ENST00000464286 DYMQ7RTS9 669 aa7.72□□□□□ -1.17
CLSTN1-204ENST00000464286 FBXO33Q7Z6M2 555 aa7.72□□□□□ -1.17
CLSTN1-204ENST00000464286 SESTD1Q86VW0 696 aa7.72□□□□□ -1.17
CLSTN1-204ENST00000464286 JAMLQ86YT9 394 aa7.72□□□□□ -1.17
CLSTN1-204ENST00000464286 LRRC34Q8IZ02 419 aa7.72□□□□□ -1.17
CLSTN1-204ENST00000464286 ARHGAP18Q8N392 663 aa7.72□□□□□ -1.17
CLSTN1-204ENST00000464286 OR2W6PQ8NHA6 318 aa7.72□□□□□ -1.17
CLSTN1-204ENST00000464286 TBC1D16Q8TBP0 767 aa7.72□□□□□ -1.17
CLSTN1-204ENST00000464286 ZFAND2BQ8WV99 257 aa7.72□□□□□ -1.17
CLSTN1-204ENST00000464286 STAMBPL1Q96FJ0 436 aa7.72□□□□□ -1.17
CLSTN1-204ENST00000464286 MAGEB18Q96M61 343 aa7.72□□□□□ -1.17
CLSTN1-204ENST00000464286 FAM210AQ96ND0 272 aa7.72□□□□□ -1.17
CLSTN1-204ENST00000464286 STK33Q9BYT3 514 aa7.72□□□□□ -1.17
CLSTN1-204ENST00000464286 FHDC1Q9C0D6 1143 aaPredicted RBP7.72□□□□□ -1.17
CLSTN1-204ENST00000464286 WNT8AQ9H1J5 351 aa7.72□□□□□ -1.17
CLSTN1-204ENST00000464286 DPH5Q9H2P9 285 aa7.72□□□□□ -1.17
CLSTN1-204ENST00000464286 AZI2Q9H6S1 392 aa7.72□□□□□ -1.17
CLSTN1-204ENST00000464286 TIMMDC1Q9NPL8 285 aa7.72□□□□□ -1.17
CLSTN1-204ENST00000464286 ZDHHC18Q9NUE0 388 aa7.72□□□□□ -1.17
CLSTN1-204ENST00000464286 SENP1Q9P0U3 644 aa7.72□□□□□ -1.17
CLSTN1-204ENST00000464286 WHRNQ9P202 907 aa7.72□□□□□ -1.17
CLSTN1-204ENST00000464286 CNOT8Q9UFF9 292 aaKnown RBP7.72□□□□□ -1.17
CLSTN1-204ENST00000464286 NENFQ9UMX5 172 aa7.72□□□□□ -1.17
CLSTN1-204ENST00000464286 SRCAPQ6ZRS2 3230 aa7.71□□□□□ -1.17
CLSTN1-204ENST00000464286 BCL9O00512 1426 aa7.71□□□□□ -1.17
CLSTN1-204ENST00000464286 TLDC2A0PJX2 215 aa7.71□□□□□ -1.18
CLSTN1-204ENST00000464286 FRMD3A2A2Y4 597 aa7.71□□□□□ -1.18
CLSTN1-204ENST00000464286 KIAA0391O15091 583 aaKnown RBP7.71□□□□□ -1.18
CLSTN1-204ENST00000464286 TBX3O15119 743 aa7.71□□□□□ -1.18
CLSTN1-204ENST00000464286 MAPK13O15264 365 aa7.71□□□□□ -1.18
CLSTN1-204ENST00000464286 DIAPH2O60879 1101 aa7.71□□□□□ -1.18
CLSTN1-204ENST00000464286 TBCAO75347 108 aaKnown RBP7.71□□□□□ -1.18
CLSTN1-204ENST00000464286 ARHGEF15O94989 841 aa7.71□□□□□ -1.18
CLSTN1-204ENST00000464286 NPTXRO95502 500 aa7.71□□□□□ -1.18
CLSTN1-204ENST00000464286 GAS8O95995 478 aa7.71□□□□□ -1.18
CLSTN1-204ENST00000464286 OAS1P00973 400 aaKnown RBP7.71□□□□□ -1.18
CLSTN1-204ENST00000464286 PLA2G4BP0C869 781 aa7.71□□□□□ -1.18
CLSTN1-204ENST00000464286 BCRP11274 1271 aa7.71□□□□□ -1.18
CLSTN1-204ENST00000464286 KRT13P13646 458 aa7.71□□□□□ -1.18
CLSTN1-204ENST00000464286 CCNB1P14635 433 aa7.71□□□□□ -1.18
CLSTN1-204ENST00000464286 PECAM1P16284 738 aaPredicted RBP7.71□□□□□ -1.18
CLSTN1-204ENST00000464286 TNFAIP3P21580 790 aa7.71□□□□□ -1.18
CLSTN1-204ENST00000464286 NR2F2P24468 414 aa7.71□□□□□ -1.18
CLSTN1-204ENST00000464286 STX2P32856 288 aa7.71□□□□□ -1.18
CLSTN1-204ENST00000464286 PCK1P35558 622 aa7.71□□□□□ -1.18
CLSTN1-204ENST00000464286 SOX5P35711 763 aa7.71□□□□□ -1.18
CLSTN1-204ENST00000464286 PLTPP55058 493 aa7.71□□□□□ -1.18
CLSTN1-204ENST00000464286 JAM2P57087 298 aa7.71□□□□□ -1.18
CLSTN1-204ENST00000464286 RNASE9P60153 205 aaKnown RBP7.71□□□□□ -1.18
CLSTN1-204ENST00000464286 NCALDP61601 193 aa7.71□□□□□ -1.18
CLSTN1-204ENST00000464286 POU5F1Q01860 360 aaKnown RBP7.71□□□□□ -1.18
CLSTN1-204ENST00000464286 MECOMQ03112 1051 aa7.71□□□□□ -1.18
CLSTN1-204ENST00000464286 SRSF11Q05519 484 aaKnown RBP7.71□□□□□ -1.18
CLSTN1-204ENST00000464286 KLRC3Q07444 240 aa7.71□□□□□ -1.18
CLSTN1-204ENST00000464286 MYBPC2Q14324 1141 aa7.71□□□□□ -1.18
CLSTN1-204ENST00000464286 CNGA2Q16280 664 aa7.71□□□□□ -1.18
CLSTN1-204ENST00000464286 KNOP1Q1ED39 458 aaKnown RBP7.71□□□□□ -1.18
CLSTN1-204ENST00000464286 BMT2Q1RMZ1 405 aa7.71□□□□□ -1.18
CLSTN1-204ENST00000464286 OXLD1Q5BKU9 147 aa7.71□□□□□ -1.18
CLSTN1-204ENST00000464286 FAM133BQ5BKY9 247 aaKnown RBP7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms