RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 POLR2FP61218 127 aaKnown RBP20.66■□□□□ 0.9
CCDC78-206ENST00000463539 ENPEPQ07075 957 aa20.66■□□□□ 0.9
CCDC78-206ENST00000463539 NOLC1Q14978 699 aaKnown RBP eCLIP20.66■□□□□ 0.9
CCDC78-206ENST00000463539 FAM187BQ17R55 369 aa20.66■□□□□ 0.9
CCDC78-206ENST00000463539 CYP26C1Q6V0L0 522 aa20.66■□□□□ 0.9
CCDC78-206ENST00000463539 RUFY4Q6ZNE9 571 aa20.66■□□□□ 0.9
CCDC78-206ENST00000463539 SLAIN1Q8ND83 568 aa20.66■□□□□ 0.9
CCDC78-206ENST00000463539 PRIMPOLQ96LW4 560 aa20.66■□□□□ 0.9
CCDC78-206ENST00000463539 GANQ9H2C0 597 aa20.66■□□□□ 0.9
CCDC78-206ENST00000463539 DDX20Q9UHI6 824 aaKnown RBP20.66■□□□□ 0.9
CCDC78-206ENST00000463539 SOWAHDA6NJG2 315 aa20.65■□□□□ 0.9
CCDC78-206ENST00000463539 LRRIQ3A6PVS8 624 aaPredicted RBP20.65■□□□□ 0.9
CCDC78-206ENST00000463539 P4HA2O15460 535 aa20.65■□□□□ 0.9
CCDC78-206ENST00000463539 MYCNP04198 464 aaPredicted RBP20.65■□□□□ 0.9
CCDC78-206ENST00000463539 IQCF3P0C7M6 154 aa20.65■□□□□ 0.9
CCDC78-206ENST00000463539 ACTN1P12814 892 aa20.65■□□□□ 0.9
CCDC78-206ENST00000463539 HOXC8P31273 242 aa20.65■□□□□ 0.9
CCDC78-206ENST00000463539 MXI1P50539 228 aa20.65■□□□□ 0.9
CCDC78-206ENST00000463539 MCL1Q07820 350 aa20.65■□□□□ 0.9
CCDC78-206ENST00000463539 KIZQ2M2Z5 673 aa20.65■□□□□ 0.9
CCDC78-206ENST00000463539 TRIM65Q6PJ69 517 aa20.65■□□□□ 0.9
CCDC78-206ENST00000463539 MPZL3Q6UWV2 235 aa20.65■□□□□ 0.9
CCDC78-206ENST00000463539 RRAGAQ7L523 313 aa20.65■□□□□ 0.9
CCDC78-206ENST00000463539 ZBTB33Q86T24 672 aa20.65■□□□□ 0.9
CCDC78-206ENST00000463539 BAP1Q92560 729 aa20.65■□□□□ 0.9
CCDC78-206ENST00000463539 BEGAINQ9BUH8 593 aa20.65■□□□□ 0.9
CCDC78-206ENST00000463539 NLRC4Q9NPP4 1024 aa20.65■□□□□ 0.9
CCDC78-206ENST00000463539 RBAKQ9NYW8 714 aaPredicted RBP20.65■□□□□ 0.9
CCDC78-206ENST00000463539 CNTNAP2Q9UHC6 1331 aa20.65■□□□□ 0.9
CCDC78-206ENST00000463539 LRRC53A6NM62 1247 aa20.64■□□□□ 0.9
CCDC78-206ENST00000463539 TREHO43280 583 aa20.64■□□□□ 0.9
CCDC78-206ENST00000463539 CSDE1O75534 798 aaKnown RBP20.64■□□□□ 0.9
CCDC78-206ENST00000463539 INHAP05111 366 aa20.64■□□□□ 0.9
CCDC78-206ENST00000463539 DLATP10515 647 aaKnown RBP20.64■□□□□ 0.9
CCDC78-206ENST00000463539 PROZP22891 400 aa20.64■□□□□ 0.9
CCDC78-206ENST00000463539 CST5P28325 142 aaPredicted RBP20.64■□□□□ 0.9
CCDC78-206ENST00000463539 MEA1Q16626 185 aa20.64■□□□□ 0.9
CCDC78-206ENST00000463539 KLHDC7AQ5VTJ3 777 aa20.64■□□□□ 0.9
CCDC78-206ENST00000463539 SRGAP1Q7Z6B7 1085 aa20.64■□□□□ 0.9
CCDC78-206ENST00000463539 SPTLC3Q9NUV7 552 aa20.64■□□□□ 0.9
CCDC78-206ENST00000463539 ABLIM1O14639 778 aa20.64■□□□□ 0.89
CCDC78-206ENST00000463539 UCHL3P15374 230 aa20.64■□□□□ 0.89
CCDC78-206ENST00000463539 ZNF200P98182 395 aaPredicted RBP20.64■□□□□ 0.89
CCDC78-206ENST00000463539 MAP2K1Q02750 393 aaPredicted RBP20.64■□□□□ 0.89
CCDC78-206ENST00000463539 TMEM62Q0P6H9 643 aa20.64■□□□□ 0.89
CCDC78-206ENST00000463539 PSMD6Q15008 389 aa20.64■□□□□ 0.89
CCDC78-206ENST00000463539 AMHR2Q16671 573 aa20.64■□□□□ 0.89
CCDC78-206ENST00000463539 ZNF568Q3ZCX4 644 aa20.64■□□□□ 0.89
CCDC78-206ENST00000463539 ZBTB41Q5SVQ8 909 aa20.64■□□□□ 0.89
CCDC78-206ENST00000463539 E4F1Q66K89 784 aaPredicted RBP20.64■□□□□ 0.89
CCDC78-206ENST00000463539 DPY19L2P1Q6NXN4 242 aa20.64■□□□□ 0.89
CCDC78-206ENST00000463539 PDXDC1Q6P996 788 aa20.64■□□□□ 0.89
CCDC78-206ENST00000463539 CRELD2Q6UXH1 353 aaPredicted RBP20.64■□□□□ 0.89
CCDC78-206ENST00000463539 KLHDC9Q8NEP7 349 aa20.64■□□□□ 0.89
CCDC78-206ENST00000463539 TMEM117Q9H0C3 514 aa20.64■□□□□ 0.89
CCDC78-206ENST00000463539 INTS2Q9H0H0 1204 aaKnown RBP20.64■□□□□ 0.89
CCDC78-206ENST00000463539 NUCKS1Q9H1E3 243 aaKnown RBP20.64■□□□□ 0.89
CCDC78-206ENST00000463539 ADAMTS10Q9H324 1103 aa20.64■□□□□ 0.89
CCDC78-206ENST00000463539 PTPRHQ9HD43 1115 aa20.64■□□□□ 0.89
CCDC78-206ENST00000463539 TSKSQ9UJT2 592 aa20.64■□□□□ 0.89
CCDC78-206ENST00000463539 GINS2Q9Y248 185 aa20.64■□□□□ 0.89
CCDC78-206ENST00000463539 TNFSF13BQ9Y275 285 aa20.64■□□□□ 0.89
CCDC78-206ENST00000463539 HTTP42858 3142 aa20.63■□□□□ 0.89
CCDC78-206ENST00000463539 PMM2O15305 246 aa20.63■□□□□ 0.89
CCDC78-206ENST00000463539 ASGR1P07306 291 aa20.63■□□□□ 0.89
CCDC78-206ENST00000463539 HNRNPH3P31942 346 aaKnown RBP20.63■□□□□ 0.89
CCDC78-206ENST00000463539 GTF2H1P32780 548 aa20.63■□□□□ 0.89
CCDC78-206ENST00000463539 KCNA10Q16322 511 aa20.63■□□□□ 0.89
CCDC78-206ENST00000463539 NBPF20Q3BBV1 942 aa20.63■□□□□ 0.89
CCDC78-206ENST00000463539 WDR59Q6PJI9 974 aa20.63■□□□□ 0.89
CCDC78-206ENST00000463539 CCAR2Q8N163 923 aaKnown RBP20.63■□□□□ 0.89
CCDC78-206ENST00000463539 PCSK9Q8NBP7 692 aaKnown RBP20.63■□□□□ 0.89
CCDC78-206ENST00000463539 DNAJB3Q8WWF6 145 aa20.63■□□□□ 0.89
CCDC78-206ENST00000463539 FNBP1Q96RU3 617 aa20.63■□□□□ 0.89
CCDC78-206ENST00000463539 POP1Q99575 1024 aaKnown RBP20.63■□□□□ 0.89
CCDC78-206ENST00000463539 GCOM2Q9BZD3 368 aaPredicted RBP20.63■□□□□ 0.89
CCDC78-206ENST00000463539 TMEM8AQ9HCN3 771 aa20.63■□□□□ 0.89
CCDC78-206ENST00000463539 SIX2Q9NPC8 291 aa20.63■□□□□ 0.89
CCDC78-206ENST00000463539 FBXL5Q9UKA1 691 aa20.63■□□□□ 0.89
CCDC78-206ENST00000463539 PLAGL2Q9UPG8 496 aa20.63■□□□□ 0.89
CCDC78-206ENST00000463539 CENPFP49454 3210 aa20.62■□□□□ 0.89
CCDC78-206ENST00000463539 OGTO15294 1046 aa20.62■□□□□ 0.89
CCDC78-206ENST00000463539 FAM189A1O60320 539 aa20.62■□□□□ 0.89
CCDC78-206ENST00000463539 GPR32O75388 356 aa20.62■□□□□ 0.89
CCDC78-206ENST00000463539 ERLIN2O94905 339 aa20.62■□□□□ 0.89
CCDC78-206ENST00000463539 GRK4P32298 578 aa20.62■□□□□ 0.89
CCDC78-206ENST00000463539 MTF1Q14872 753 aa20.62■□□□□ 0.89
CCDC78-206ENST00000463539 KRT39Q6A163 491 aa20.62■□□□□ 0.89
CCDC78-206ENST00000463539 RAD9BQ6WBX8 426 aa20.62■□□□□ 0.89
CCDC78-206ENST00000463539 RNF180Q86T96 592 aa20.62■□□□□ 0.89
CCDC78-206ENST00000463539 TOPORSQ9NS56 1045 aaPredicted RBP20.62■□□□□ 0.89
CCDC78-206ENST00000463539 KCND1Q9NSA2 647 aa20.62■□□□□ 0.89
CCDC78-206ENST00000463539 GTF2IRD1Q9UHL9 959 aa20.62■□□□□ 0.89
CCDC78-206ENST00000463539 TRIM17Q9Y577 477 aa20.62■□□□□ 0.89
CCDC78-206ENST00000463539 FHOD1Q9Y613 1164 aa20.62■□□□□ 0.89
CCDC78-206ENST00000463539 SEZ6Q53EL9 994 aa20.62■□□□□ 0.89
CCDC78-206ENST00000463539 EEF1DP3Q658K8 133 aa20.62■□□□□ 0.89
CCDC78-206ENST00000463539 CCSAPQ6IQ19 270 aaPredicted RBP20.62■□□□□ 0.89
CCDC78-206ENST00000463539 TAF2Q6P1X5 1199 aa20.62■□□□□ 0.89
CCDC78-206ENST00000463539 TOGARAM2Q6ZUX3 1019 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms