RNA–Protein interactions for RNA: ENST00000463426.5

CUL4A-205, Transcript of cullin 4A, humanhuman

TSL 3

Gene CUL4A, Length 893 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-205ENST00000463426 MATR3P43243 847 aaKnown RBP eCLIP28.56■■■□□ 2.16
CUL4A-205ENST00000463426 SMAD3P84022 425 aaKnown RBP28.56■■■□□ 2.16
CUL4A-205ENST00000463426 KNOP1Q1ED39 458 aaKnown RBP28.56■■■□□ 2.16
CUL4A-205ENST00000463426 SKOR2Q2VWA4 1001 aaPredicted RBP28.56■■■□□ 2.16
CUL4A-205ENST00000463426 EEF1DP3Q658K8 133 aa28.56■■■□□ 2.16
CUL4A-205ENST00000463426 ABI1Q8IZP0 508 aa28.56■■■□□ 2.16
CUL4A-205ENST00000463426 RAD9AQ99638 391 aa28.56■■■□□ 2.16
CUL4A-205ENST00000463426 CCDC94Q9BW85 323 aaPredicted RBP28.56■■■□□ 2.16
CUL4A-205ENST00000463426 EIF2AQ9BY44 585 aaKnown RBP28.56■■■□□ 2.16
CUL4A-205ENST00000463426 FGFBP2Q9BYJ0 223 aa28.56■■■□□ 2.16
CUL4A-205ENST00000463426 ANKFY1Q9P2R3 1169 aa28.56■■■□□ 2.16
CUL4A-205ENST00000463426 GIT1Q9Y2X7 761 aa28.56■■■□□ 2.16
CUL4A-205ENST00000463426 PCDHA11Q9Y5I1 949 aa28.56■■■□□ 2.16
CUL4A-205ENST00000463426 RALGAPA2Q2PPJ7 1873 aa28.55■■■□□ 2.16
CUL4A-205ENST00000463426 CARNS1A5YM72 827 aa28.55■■■□□ 2.16
CUL4A-205ENST00000463426 ABLIM1O14639 778 aa28.55■■■□□ 2.16
CUL4A-205ENST00000463426 ITGA4P13612 1032 aa28.55■■■□□ 2.16
CUL4A-205ENST00000463426 HTRA4P83105 476 aaPredicted RBP28.55■■■□□ 2.16
CUL4A-205ENST00000463426 GLB1LQ6UWU2 654 aa28.55■■■□□ 2.16
CUL4A-205ENST00000463426 RANBP2P49792 3224 aaKnown RBP28.54■■■□□ 2.16
CUL4A-205ENST00000463426 A0A0B4J269 797 aa28.54■■■□□ 2.16
CUL4A-205ENST00000463426 DGKIO75912 1065 aa28.54■■■□□ 2.16
CUL4A-205ENST00000463426 LDHAP00338 332 aaKnown RBP28.54■■■□□ 2.16
CUL4A-205ENST00000463426 ATF7P17544 494 aaPredicted RBP28.54■■■□□ 2.16
CUL4A-205ENST00000463426 GRM5P41594 1212 aa28.54■■■□□ 2.16
CUL4A-205ENST00000463426 CAMK4Q16566 473 aa28.54■■■□□ 2.16
CUL4A-205ENST00000463426 KLHL40Q2TBA0 621 aa28.54■■■□□ 2.16
CUL4A-205ENST00000463426 CCDC183Q5T5S1 534 aa28.54■■■□□ 2.16
CUL4A-205ENST00000463426 CMTR2Q8IYT2 770 aaKnown RBP28.54■■■□□ 2.16
CUL4A-205ENST00000463426 SMG8Q8ND04 991 aaKnown RBP28.54■■■□□ 2.16
CUL4A-205ENST00000463426 TMEM174Q8WUU8 243 aa28.54■■■□□ 2.16
CUL4A-205ENST00000463426 YME1L1Q96TA2 773 aa28.54■■■□□ 2.16
CUL4A-205ENST00000463426 MRPL9Q9BYD2 267 aaKnown RBP28.54■■■□□ 2.16
CUL4A-205ENST00000463426 TMEM117Q9H0C3 514 aa28.54■■■□□ 2.16
CUL4A-205ENST00000463426 TOPORSQ9NS56 1045 aaPredicted RBP28.54■■■□□ 2.16
CUL4A-205ENST00000463426 MAN1B1Q9UKM7 699 aa28.54■■■□□ 2.16
CUL4A-205ENST00000463426 GTF3C5Q9Y5Q8 519 aaPredicted RBP28.54■■■□□ 2.16
CUL4A-205ENST00000463426 TDRD15B5MCY1 1934 aaKnown RBP28.53■■■□□ 2.16
CUL4A-205ENST00000463426 OGTO15294 1046 aa28.53■■■□□ 2.16
CUL4A-205ENST00000463426 INPPL1O15357 1258 aa28.53■■■□□ 2.16
CUL4A-205ENST00000463426 TLL1O43897 1013 aa28.53■■■□□ 2.16
CUL4A-205ENST00000463426 UPP2O95045 317 aa28.53■■■□□ 2.16
CUL4A-205ENST00000463426 C12orf56Q8IXR9 622 aa28.53■■■□□ 2.16
CUL4A-205ENST00000463426 POMGNT1Q8WZA1 660 aa28.53■■■□□ 2.16
CUL4A-205ENST00000463426 MSTO1Q9BUK6 570 aa28.53■■■□□ 2.16
CUL4A-205ENST00000463426 RSAD1Q9HA92 442 aa28.53■■■□□ 2.16
CUL4A-205ENST00000463426 TYW1Q9NV66 732 aaKnown RBP28.53■■■□□ 2.16
CUL4A-205ENST00000463426 KANSL3Q9P2N6 904 aa28.53■■■□□ 2.16
CUL4A-205ENST00000463426 MSRAQ9UJ68 235 aa28.53■■■□□ 2.16
CUL4A-205ENST00000463426 PDXKO00764 312 aa28.52■■■□□ 2.16
CUL4A-205ENST00000463426 YARSP54577 528 aaKnown RBP28.52■■■□□ 2.16
CUL4A-205ENST00000463426 KCNA1Q09470 495 aa28.52■■■□□ 2.16
CUL4A-205ENST00000463426 MORC3Q14149 939 aa28.52■■■□□ 2.16
CUL4A-205ENST00000463426 SLC39A4Q6P5W5 647 aa28.52■■■□□ 2.16
CUL4A-205ENST00000463426 CDR2LQ86X02 465 aaPredicted RBP28.52■■■□□ 2.16
CUL4A-205ENST00000463426 GLIS3Q8NEA6 775 aa28.52■■■□□ 2.16
CUL4A-205ENST00000463426 ZNF689Q96CS4 500 aaPredicted RBP28.52■■■□□ 2.16
CUL4A-205ENST00000463426 NXF3Q9H4D5 531 aaKnown RBP28.52■■■□□ 2.16
CUL4A-205ENST00000463426 KIAA1586Q9HCI6 787 aa28.52■■■□□ 2.16
CUL4A-205ENST00000463426 TRIP11Q15643 1979 aa28.51■■■□□ 2.16
CUL4A-205ENST00000463426 CLTAP09496 248 aa28.51■■■□□ 2.15
CUL4A-205ENST00000463426 MYBPC2Q14324 1141 aa28.51■■■□□ 2.15
CUL4A-205ENST00000463426 ARMCX5Q6P1M9 558 aa28.51■■■□□ 2.15
CUL4A-205ENST00000463426 RBM43Q6ZSC3 357 aaKnown RBP28.51■■■□□ 2.15
CUL4A-205ENST00000463426 RNF169Q8NCN4 708 aa28.51■■■□□ 2.15
CUL4A-205ENST00000463426 URGCPQ8TCY9 931 aa28.51■■■□□ 2.15
CUL4A-205ENST00000463426 SP7Q8TDD2 431 aaPredicted RBP28.51■■■□□ 2.15
CUL4A-205ENST00000463426 ACAP3Q96P50 834 aa28.51■■■□□ 2.15
CUL4A-205ENST00000463426 TSPAN18Q96SJ8 248 aa28.51■■■□□ 2.15
CUL4A-205ENST00000463426 RC3H2Q9HBD1 1191 aaKnown RBP28.51■■■□□ 2.15
CUL4A-205ENST00000463426 AGO2Q9UKV8 859 aaKnown RBP28.51■■■□□ 2.15
CUL4A-205ENST00000463426 USP20Q9Y2K6 914 aa28.51■■■□□ 2.15
CUL4A-205ENST00000463426 GDAQ9Y2T3 454 aa28.51■■■□□ 2.15
CUL4A-205ENST00000463426 HOXD13P35453 343 aa28.5■■■□□ 2.15
CUL4A-205ENST00000463426 NFIL3Q16649 462 aa28.5■■■□□ 2.15
CUL4A-205ENST00000463426 FOXR2Q6PJQ5 311 aa28.5■■■□□ 2.15
CUL4A-205ENST00000463426 AGMOQ6ZNB7 445 aa28.5■■■□□ 2.15
CUL4A-205ENST00000463426 ZBTB33Q86T24 672 aa28.5■■■□□ 2.15
CUL4A-205ENST00000463426 ZBTB45Q96K62 511 aaPredicted RBP28.5■■■□□ 2.15
CUL4A-205ENST00000463426 PDCD11Q14690 1871 aaKnown RBP28.5■■■□□ 2.15
CUL4A-205ENST00000463426 ANKRD63C9JTQ0 380 aa28.49■■■□□ 2.15
CUL4A-205ENST00000463426 PSMA7O14818 248 aa28.49■■■□□ 2.15
CUL4A-205ENST00000463426 CALUO43852 315 aaPredicted RBP28.49■■■□□ 2.15
CUL4A-205ENST00000463426 NELFCDQ8IXH7 590 aa28.49■■■□□ 2.15
CUL4A-205ENST00000463426 LRRC43Q8N309 656 aa28.49■■■□□ 2.15
CUL4A-205ENST00000463426 ERCC4Q92889 916 aaPredicted RBP28.49■■■□□ 2.15
CUL4A-205ENST00000463426 DHTKD1Q96HY7 919 aaPredicted RBP28.49■■■□□ 2.15
CUL4A-205ENST00000463426 KCTD10Q9H3F6 313 aa28.49■■■□□ 2.15
CUL4A-205ENST00000463426 PLEKHA5Q9HAU0 1116 aa28.49■■■□□ 2.15
CUL4A-205ENST00000463426 AGPAT3Q9NRZ7 376 aa28.49■■■□□ 2.15
CUL4A-205ENST00000463426 TRAF3IP3Q9Y228 551 aa28.49■■■□□ 2.15
CUL4A-205ENST00000463426 RWDD3Q9Y3V2 267 aa28.49■■■□□ 2.15
CUL4A-205ENST00000463426 TGFB1I1O43294 461 aa28.48■■■□□ 2.15
CUL4A-205ENST00000463426 RECQL4O94761 1208 aa28.48■■■□□ 2.15
CUL4A-205ENST00000463426 SLC9A9Q8IVB4 645 aa28.48■■■□□ 2.15
CUL4A-205ENST00000463426 CD302Q8IX05 232 aa28.48■■■□□ 2.15
CUL4A-205ENST00000463426 RPS6KC1Q96S38 1066 aa28.48■■■□□ 2.15
CUL4A-205ENST00000463426 RNF19AQ9NV58 838 aa28.48■■■□□ 2.15
CUL4A-205ENST00000463426 PARP2Q9UGN5 583 aa28.48■■■□□ 2.15
CUL4A-205ENST00000463426 NLRC5Q86WI3 1866 aa28.47■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms