RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 DPF3Q92784 378 aa13.63□□□□□ -0.23
NUP58-206ENST00000463407 EXOC4Q96A65 974 aa13.63□□□□□ -0.23
NUP58-206ENST00000463407 REEP2Q9BRK0 252 aa13.63□□□□□ -0.23
NUP58-206ENST00000463407 MAP3K7O43318 606 aa13.63□□□□□ -0.23
NUP58-206ENST00000463407 ICAM1P05362 532 aa13.63□□□□□ -0.23
NUP58-206ENST00000463407 RPS6P62753 249 aaKnown RBP13.63□□□□□ -0.23
NUP58-206ENST00000463407 ZSCAN26Q16670 478 aa13.63□□□□□ -0.23
NUP58-206ENST00000463407 TRIM72Q6ZMU5 477 aa13.63□□□□□ -0.23
NUP58-206ENST00000463407 PGBD3Q8N328 593 aa13.63□□□□□ -0.23
NUP58-206ENST00000463407 SARS2Q9NP81 518 aaKnown RBP13.63□□□□□ -0.23
NUP58-206ENST00000463407 CYP26B1Q9NR63 512 aa13.63□□□□□ -0.23
NUP58-206ENST00000463407 SYNGAP1Q96PV0 1343 aa13.63□□□□□ -0.23
NUP58-206ENST00000463407 NPTXRO95502 500 aa13.62□□□□□ -0.23
NUP58-206ENST00000463407 BACE1P56817 501 aa13.62□□□□□ -0.23
NUP58-206ENST00000463407 KRT17Q04695 432 aa13.62□□□□□ -0.23
NUP58-206ENST00000463407 BAG2O95816 211 aa13.62□□□□□ -0.23
NUP58-206ENST00000463407 GCLCP48506 637 aaPredicted RBP13.62□□□□□ -0.23
NUP58-206ENST00000463407 CXCL9Q07325 125 aa13.62□□□□□ -0.23
NUP58-206ENST00000463407 SNX17Q15036 470 aa13.62□□□□□ -0.23
NUP58-206ENST00000463407 KCNH7Q9NS40 1196 aa13.62□□□□□ -0.23
NUP58-206ENST00000463407 PPP2R3BQ9Y5P8 575 aa13.62□□□□□ -0.23
NUP58-206ENST00000463407 MEGF6O75095 1541 aa13.62□□□□□ -0.23
NUP58-206ENST00000463407 IQANK1A0A1B0GTG1 560 aa13.62□□□□□ -0.23
NUP58-206ENST00000463407 MGAT5BQ3V5L5 792 aa13.62□□□□□ -0.23
NUP58-206ENST00000463407 TAF1BQ53T94 588 aaPredicted RBP13.62□□□□□ -0.23
NUP58-206ENST00000463407 NBPF12Q5TAG4 269 aaPredicted RBP13.62□□□□□ -0.23
NUP58-206ENST00000463407 SPATS2Q86XZ4 545 aaKnown RBP13.62□□□□□ -0.23
NUP58-206ENST00000463407 PARD6BQ9BYG5 372 aa13.62□□□□□ -0.23
NUP58-206ENST00000463407 MAGEB5Q9BZ81 275 aa13.62□□□□□ -0.23
NUP58-206ENST00000463407 DCDC2CA8MYV0 355 aa13.62□□□□□ -0.23
NUP58-206ENST00000463407 PDXKO00764 312 aa13.62□□□□□ -0.23
NUP58-206ENST00000463407 SNX2O60749 519 aa13.62□□□□□ -0.23
NUP58-206ENST00000463407 SUN1O94901 812 aa13.62□□□□□ -0.23
NUP58-206ENST00000463407 CHEK2O96017 543 aa13.62□□□□□ -0.23
NUP58-206ENST00000463407 PGK2P07205 417 aa13.62□□□□□ -0.23
NUP58-206ENST00000463407 TAC1P20366 129 aa13.62□□□□□ -0.23
NUP58-206ENST00000463407 RCN2Q14257 317 aa13.62□□□□□ -0.23
NUP58-206ENST00000463407 HEATR6Q6AI08 1181 aaKnown RBP13.62□□□□□ -0.23
NUP58-206ENST00000463407 ANKRD40Q6AI12 368 aa13.62□□□□□ -0.23
NUP58-206ENST00000463407 ACER1Q8TDN7 264 aa13.62□□□□□ -0.23
NUP58-206ENST00000463407 SH3TC2Q8TF17 1288 aa13.62□□□□□ -0.23
NUP58-206ENST00000463407 WHAMMQ8TF30 809 aa13.62□□□□□ -0.23
NUP58-206ENST00000463407 HPS3Q969F9 1004 aa13.62□□□□□ -0.23
NUP58-206ENST00000463407 SAYSD1Q9NPB0 183 aa13.62□□□□□ -0.23
NUP58-206ENST00000463407 FBXO28Q9NVF7 368 aa13.62□□□□□ -0.23
NUP58-206ENST00000463407 MIF4GDA9UHW6 222 aaKnown RBP13.62□□□□□ -0.23
NUP58-206ENST00000463407 PPP4CP60510 307 aa13.62□□□□□ -0.23
NUP58-206ENST00000463407 IRX4P78413 519 aa13.62□□□□□ -0.23
NUP58-206ENST00000463407 MAP1SQ66K74 1059 aaPredicted RBP13.62□□□□□ -0.23
NUP58-206ENST00000463407 RNF217Q8TC41 542 aa13.62□□□□□ -0.23
NUP58-206ENST00000463407 EDEM3Q9BZQ6 932 aa13.62□□□□□ -0.23
NUP58-206ENST00000463407 PLEKHA5Q9HAU0 1116 aa13.62□□□□□ -0.23
NUP58-206ENST00000463407 PARVAQ9NVD7 372 aa13.62□□□□□ -0.23
NUP58-206ENST00000463407 CAPN7Q9Y6W3 813 aa13.62□□□□□ -0.23
NUP58-206ENST00000463407 MST1RQ04912 1400 aa13.61□□□□□ -0.23
NUP58-206ENST00000463407 GSTA4O15217 222 aa13.61□□□□□ -0.23
NUP58-206ENST00000463407 KRT7P08729 469 aa13.61□□□□□ -0.23
NUP58-206ENST00000463407 ST8SIA6P61647 398 aa13.61□□□□□ -0.23
NUP58-206ENST00000463407 CUL1Q13616 776 aa13.61□□□□□ -0.23
NUP58-206ENST00000463407 ZNF235Q14590 738 aa13.61□□□□□ -0.23
NUP58-206ENST00000463407 XRRA1Q6P2D8 792 aa13.61□□□□□ -0.23
NUP58-206ENST00000463407 SDCCAG3Q96C92 435 aa13.61□□□□□ -0.23
NUP58-206ENST00000463407 GOLGA8MH3BSY2 632 aa13.61□□□□□ -0.23
NUP58-206ENST00000463407 SV2CQ496J9 727 aa13.61□□□□□ -0.23
NUP58-206ENST00000463407 DDX56Q9NY93 547 aaKnown RBP13.61□□□□□ -0.23
NUP58-206ENST00000463407 MAD2L2Q9UI95 211 aa13.61□□□□□ -0.23
NUP58-206ENST00000463407 IQGAP1P46940 1657 aa13.61□□□□□ -0.23
NUP58-206ENST00000463407 KDM4FA0A1W2PPD8 638 aa13.61□□□□□ -0.23
NUP58-206ENST00000463407 RASGRF2O14827 1237 aa13.61□□□□□ -0.23
NUP58-206ENST00000463407 CYP26A1O43174 497 aa13.61□□□□□ -0.23
NUP58-206ENST00000463407 TTC4O95801 387 aa13.61□□□□□ -0.23
NUP58-206ENST00000463407 ZKSCAN8Q15776 578 aaPredicted RBP13.61□□□□□ -0.23
NUP58-206ENST00000463407 TAS2R42Q7RTR8 314 aa13.61□□□□□ -0.23
NUP58-206ENST00000463407 E5RI56 91 aa13.61□□□□□ -0.23
NUP58-206ENST00000463407 MMP14P50281 582 aa13.61□□□□□ -0.23
NUP58-206ENST00000463407 ARL4CP56559 192 aa13.61□□□□□ -0.23
NUP58-206ENST00000463407 KCNB1Q14721 858 aa13.61□□□□□ -0.23
NUP58-206ENST00000463407 NOTUMQ6P988 496 aa13.61□□□□□ -0.23
NUP58-206ENST00000463407 ZNF512Q96ME7 567 aaPredicted RBP13.61□□□□□ -0.23
NUP58-206ENST00000463407 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.61□□□□□ -0.23
NUP58-206ENST00000463407 AAASQ9NRG9 546 aa13.61□□□□□ -0.23
NUP58-206ENST00000463407 IL18RAPO95256 599 aa13.61□□□□□ -0.23
NUP58-206ENST00000463407 ANTXR2P58335 489 aa13.61□□□□□ -0.23
NUP58-206ENST00000463407 MID2Q9UJV3 735 aa13.61□□□□□ -0.23
NUP58-206ENST00000463407 WDR91A4D1P6 747 aa13.6□□□□□ -0.23
NUP58-206ENST00000463407 PODXLO00592 558 aa13.6□□□□□ -0.23
NUP58-206ENST00000463407 C2CD2LO14523 706 aa13.6□□□□□ -0.23
NUP58-206ENST00000463407 ESRRBO95718 433 aa13.6□□□□□ -0.23
NUP58-206ENST00000463407 RGS7P49802 495 aa13.6□□□□□ -0.23
NUP58-206ENST00000463407 MRPS25P82663 173 aaKnown RBP13.6□□□□□ -0.23
NUP58-206ENST00000463407 CFAP61Q8NHU2 1237 aa13.6□□□□□ -0.23
NUP58-206ENST00000463407 GPRASP2Q96D09 838 aa13.6□□□□□ -0.23
NUP58-206ENST00000463407 TRPV6Q9H1D0 765 aa13.6□□□□□ -0.23
NUP58-206ENST00000463407 NFU1Q9UMS0 254 aa13.6□□□□□ -0.23
NUP58-206ENST00000463407 ACSL3O95573 720 aa13.6□□□□□ -0.23
NUP58-206ENST00000463407 SEMA3FQ13275 785 aa13.6□□□□□ -0.23
NUP58-206ENST00000463407 MUM1Q2TAK8 710 aa13.6□□□□□ -0.23
NUP58-206ENST00000463407 SRRM1Q8IYB3 904 aaKnown RBP13.6□□□□□ -0.23
NUP58-206ENST00000463407 DCP1BQ8IZD4 617 aaKnown RBP13.6□□□□□ -0.23
NUP58-206ENST00000463407 CEP120Q8N960 986 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms