RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 CHST7Q9NS84 486 aa21.99■■□□□ 1.11
VARS-221ENST00000463184 ORC3Q9UBD5 711 aaPredicted RBP21.99■■□□□ 1.11
VARS-221ENST00000463184 TPCN1Q9ULQ1 816 aa21.99■■□□□ 1.11
VARS-221ENST00000463184 PCDHA12Q9UN75 941 aa21.99■■□□□ 1.11
VARS-221ENST00000463184 C2orf16Q68DN1 1984 aa21.99■■□□□ 1.11
VARS-221ENST00000463184 PI15O43692 258 aa21.98■■□□□ 1.11
VARS-221ENST00000463184 N4BP1O75113 896 aaKnown RBP21.98■■□□□ 1.11
VARS-221ENST00000463184 PAPLNO95428 1278 aa21.98■■□□□ 1.11
VARS-221ENST00000463184 ARF4P18085 180 aaPredicted RBP21.98■■□□□ 1.11
VARS-221ENST00000463184 GBP2P32456 591 aaPredicted RBP21.98■■□□□ 1.11
VARS-221ENST00000463184 KRT2P35908 639 aa21.98■■□□□ 1.11
VARS-221ENST00000463184 ARL2P36404 184 aa21.98■■□□□ 1.11
VARS-221ENST00000463184 MBTD1Q05BQ5 628 aa21.98■■□□□ 1.11
VARS-221ENST00000463184 AMHR2Q16671 573 aa21.98■■□□□ 1.11
VARS-221ENST00000463184 SIX5Q8N196 739 aa21.98■■□□□ 1.11
VARS-221ENST00000463184 NXPE3Q969Y0 559 aa21.98■■□□□ 1.11
VARS-221ENST00000463184 BRMS1Q9HCU9 246 aa21.98■■□□□ 1.11
VARS-221ENST00000463184 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.98■■□□□ 1.11
VARS-221ENST00000463184 EPS15L1Q9UBC2 864 aa21.98■■□□□ 1.11
VARS-221ENST00000463184 WNT16Q9UBV4 365 aa21.98■■□□□ 1.11
VARS-221ENST00000463184 CAPSQ13938 189 aa21.97■■□□□ 1.11
VARS-221ENST00000463184 CCDC105Q8IYK2 499 aa21.97■■□□□ 1.11
VARS-221ENST00000463184 ASAP3Q8TDY4 903 aa21.97■■□□□ 1.11
VARS-221ENST00000463184 SMG7Q92540 1137 aaKnown RBP21.97■■□□□ 1.11
VARS-221ENST00000463184 NKD2Q969F2 451 aaPredicted RBP21.97■■□□□ 1.11
VARS-221ENST00000463184 APOL6Q9BWW8 343 aa21.97■■□□□ 1.11
VARS-221ENST00000463184 CLUHO75153 1309 aa21.97■■□□□ 1.11
VARS-221ENST00000463184 RFPL2O75678 378 aa21.96■■□□□ 1.11
VARS-221ENST00000463184 CTDNEP1O95476 244 aa21.96■■□□□ 1.11
VARS-221ENST00000463184 SEC24BO95487 1268 aa21.96■■□□□ 1.11
VARS-221ENST00000463184 NR5A1Q13285 461 aa21.96■■□□□ 1.11
VARS-221ENST00000463184 CALCRLQ16602 461 aa21.96■■□□□ 1.11
VARS-221ENST00000463184 USP41Q3LFD5 358 aa21.96■■□□□ 1.11
VARS-221ENST00000463184 FUT10Q6P4F1 479 aa21.96■■□□□ 1.11
VARS-221ENST00000463184 FRMD5Q7Z6J6 570 aa21.96■■□□□ 1.11
VARS-221ENST00000463184 GSTCDQ8NEC7 633 aa21.96■■□□□ 1.11
VARS-221ENST00000463184 TNFRSF25Q93038 417 aa21.96■■□□□ 1.11
VARS-221ENST00000463184 CCDC43Q96MW1 224 aaKnown RBP21.96■■□□□ 1.11
VARS-221ENST00000463184 NXF3Q9H4D5 531 aaKnown RBP21.96■■□□□ 1.11
VARS-221ENST00000463184 ZDHHC7Q9NXF8 308 aa21.96■■□□□ 1.11
VARS-221ENST00000463184 FNIP2Q9P278 1114 aa21.96■■□□□ 1.11
VARS-221ENST00000463184 ZMYM2Q9UBW7 1377 aa21.96■■□□□ 1.11
VARS-221ENST00000463184 ARID2Q68CP9 1835 aa21.95■■□□□ 1.1
VARS-221ENST00000463184 A0A1B0GUA9 196 aa21.95■■□□□ 1.1
VARS-221ENST00000463184 FAM205CA6NFA0 338 aa21.95■■□□□ 1.1
VARS-221ENST00000463184 F8W810 466 aa21.95■■□□□ 1.1
VARS-221ENST00000463184 NARSO43776 548 aaKnown RBP21.95■■□□□ 1.1
VARS-221ENST00000463184 XRCC6P12956 609 aaKnown RBP eCLIP21.95■■□□□ 1.1
VARS-221ENST00000463184 GLRA2P23416 452 aa21.95■■□□□ 1.1
VARS-221ENST00000463184 RARRES1P49788 294 aa21.95■■□□□ 1.1
VARS-221ENST00000463184 CREMQ03060 361 aa21.95■■□□□ 1.1
VARS-221ENST00000463184 GRIK3Q13003 919 aa21.95■■□□□ 1.1
VARS-221ENST00000463184 ANKRD1Q15327 319 aa21.95■■□□□ 1.1
VARS-221ENST00000463184 SLC27A1Q6PCB7 646 aa21.95■■□□□ 1.1
VARS-221ENST00000463184 PALB2Q86YC2 1186 aa21.95■■□□□ 1.1
VARS-221ENST00000463184 DTWD2Q8NBA8 298 aa21.95■■□□□ 1.1
VARS-221ENST00000463184 ZNF707Q96C28 371 aaPredicted RBP21.95■■□□□ 1.1
VARS-221ENST00000463184 GPR62Q9BZJ7 368 aa21.95■■□□□ 1.1
VARS-221ENST00000463184 NT5C3AQ9H0P0 336 aa21.95■■□□□ 1.1
VARS-221ENST00000463184 TTC12Q9H892 705 aaPredicted RBP21.95■■□□□ 1.1
VARS-221ENST00000463184 PIDD1Q9HB75 910 aa21.95■■□□□ 1.1
VARS-221ENST00000463184 ADAM28Q9UKQ2 775 aa21.95■■□□□ 1.1
VARS-221ENST00000463184 TDRD15B5MCY1 1934 aaKnown RBP21.94■■□□□ 1.1
VARS-221ENST00000463184 VPS13AQ96RL7 3174 aa21.94■■□□□ 1.1
VARS-221ENST00000463184 TGM5O43548 720 aa21.94■■□□□ 1.1
VARS-221ENST00000463184 SPATA31D3P0C874 917 aa21.94■■□□□ 1.1
VARS-221ENST00000463184 MYBP10242 640 aa21.94■■□□□ 1.1
VARS-221ENST00000463184 AKAP5P24588 427 aa21.94■■□□□ 1.1
VARS-221ENST00000463184 ANGPT1Q15389 498 aa21.94■■□□□ 1.1
VARS-221ENST00000463184 SPATA31D4Q6ZUB0 917 aa21.94■■□□□ 1.1
VARS-221ENST00000463184 SLC44A3Q8N4M1 653 aa21.94■■□□□ 1.1
VARS-221ENST00000463184 RSAD2Q8WXG1 361 aa21.94■■□□□ 1.1
VARS-221ENST00000463184 MYADMQ96S97 322 aa21.94■■□□□ 1.1
VARS-221ENST00000463184 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.94■■□□□ 1.1
VARS-221ENST00000463184 PARP2Q9UGN5 583 aa21.94■■□□□ 1.1
VARS-221ENST00000463184 STK25O00506 426 aa21.93■■□□□ 1.1
VARS-221ENST00000463184 B4GALT5O43286 388 aa21.93■■□□□ 1.1
VARS-221ENST00000463184 DTNBO60941 627 aa21.93■■□□□ 1.1
VARS-221ENST00000463184 NPTXRO95502 500 aa21.93■■□□□ 1.1
VARS-221ENST00000463184 CFHP08603 1231 aa21.93■■□□□ 1.1
VARS-221ENST00000463184 FDPSP14324 419 aaKnown RBP21.93■■□□□ 1.1
VARS-221ENST00000463184 FOXK2Q01167 660 aa21.93■■□□□ 1.1
VARS-221ENST00000463184 LILRA6Q6PI73 481 aa21.93■■□□□ 1.1
VARS-221ENST00000463184 RIN2Q8WYP3 895 aaPredicted RBP21.93■■□□□ 1.1
VARS-221ENST00000463184 B3GALT6Q96L58 329 aa21.93■■□□□ 1.1
VARS-221ENST00000463184 PRKD2Q9BZL6 878 aa21.93■■□□□ 1.1
VARS-221ENST00000463184 POLR3FQ9H1D9 316 aaPredicted RBP21.93■■□□□ 1.1
VARS-221ENST00000463184 TADA2AO75478 443 aa21.92■■□□□ 1.1
VARS-221ENST00000463184 SRFP11831 508 aa21.92■■□□□ 1.1
VARS-221ENST00000463184 TXKP42681 527 aa21.92■■□□□ 1.1
VARS-221ENST00000463184 CDR2LQ86X02 465 aaPredicted RBP21.92■■□□□ 1.1
VARS-221ENST00000463184 PIGOQ8TEQ8 1089 aa21.92■■□□□ 1.1
VARS-221ENST00000463184 PRIMPOLQ96LW4 560 aa21.92■■□□□ 1.1
VARS-221ENST00000463184 KLK14Q9P0G3 267 aa21.92■■□□□ 1.1
VARS-221ENST00000463184 RIF1Q5UIP0 2472 aaKnown RBP21.92■■□□□ 1.1
VARS-221ENST00000463184 MTCL1Q9Y4B5 1905 aaKnown RBP21.92■■□□□ 1.1
VARS-221ENST00000463184 DMDP11532 3685 aa21.91■■□□□ 1.1
VARS-221ENST00000463184 KRBA1A5PL33 1030 aa21.91■■□□□ 1.1
VARS-221ENST00000463184 NEMFO60524 1076 aa21.91■■□□□ 1.1
VARS-221ENST00000463184 LAMP2P13473 410 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms