RNA–Protein interactions for RNA: ENST00000462548.6

RPRD1B-203, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 5

Gene RPRD1B, Length 2,436 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-203ENST00000462548 IFNLR1Q8IU57 520 aaPredicted RBP16.31■□□□□ 0.2
RPRD1B-203ENST00000462548 TMTC1Q8IUR5 882 aa16.31■□□□□ 0.2
RPRD1B-203ENST00000462548 LMO3Q8TAP4 145 aa16.31■□□□□ 0.2
RPRD1B-203ENST00000462548 MSTO1Q9BUK6 570 aa16.31■□□□□ 0.2
RPRD1B-203ENST00000462548 NFKBIZQ9BYH8 718 aa16.31■□□□□ 0.2
RPRD1B-203ENST00000462548 TULP1O00294 542 aaPredicted RBP16.31■□□□□ 0.2
RPRD1B-203ENST00000462548 ACKR2O00590 384 aa16.31■□□□□ 0.2
RPRD1B-203ENST00000462548 FAM189A1O60320 539 aa16.31■□□□□ 0.2
RPRD1B-203ENST00000462548 HNRNPH3P31942 346 aaKnown RBP16.31■□□□□ 0.2
RPRD1B-203ENST00000462548 GPC3P51654 580 aa16.31■□□□□ 0.2
RPRD1B-203ENST00000462548 GNASQ5JWF2 1037 aa16.31■□□□□ 0.2
RPRD1B-203ENST00000462548 EEF1DP3Q658K8 133 aa16.31■□□□□ 0.2
RPRD1B-203ENST00000462548 CACNA2D4Q7Z3S7 1137 aa16.31■□□□□ 0.2
RPRD1B-203ENST00000462548 ZBTB33Q86T24 672 aa16.31■□□□□ 0.2
RPRD1B-203ENST00000462548 ZNF397Q8NF99 534 aaPredicted RBP16.31■□□□□ 0.2
RPRD1B-203ENST00000462548 PPP1R13BQ96KQ4 1090 aa16.31■□□□□ 0.2
RPRD1B-203ENST00000462548 FAM49AQ9H0Q0 323 aaPredicted RBP16.31■□□□□ 0.2
RPRD1B-203ENST00000462548 HDAC6Q9UBN7 1215 aa16.31■□□□□ 0.2
RPRD1B-203ENST00000462548 PLAGL2Q9UPG8 496 aa16.31■□□□□ 0.2
RPRD1B-203ENST00000462548 ADAMTS4O75173 837 aa16.3■□□□□ 0.2
RPRD1B-203ENST00000462548 TOM1L1O75674 476 aa16.3■□□□□ 0.2
RPRD1B-203ENST00000462548 PLEKP08567 350 aaPredicted RBP16.3■□□□□ 0.2
RPRD1B-203ENST00000462548 UCHL3P15374 230 aa16.3■□□□□ 0.2
RPRD1B-203ENST00000462548 MATR3P43243 847 aaKnown RBP eCLIP16.3■□□□□ 0.22e-7■■■■□ 22.1
RPRD1B-203ENST00000462548 PHKA2P46019 1235 aa16.3■□□□□ 0.2
RPRD1B-203ENST00000462548 POU5F1BQ06416 359 aa16.3■□□□□ 0.2
RPRD1B-203ENST00000462548 TMEM62Q0P6H9 643 aa16.3■□□□□ 0.2
RPRD1B-203ENST00000462548 REXO1L1PQ8IX06 675 aa16.3■□□□□ 0.2
RPRD1B-203ENST00000462548 TMC2Q8TDI7 906 aa16.3■□□□□ 0.2
RPRD1B-203ENST00000462548 INTS2Q9H0H0 1204 aaKnown RBP16.3■□□□□ 0.2
RPRD1B-203ENST00000462548 PTPRHQ9HD43 1115 aa16.3■□□□□ 0.2
RPRD1B-203ENST00000462548 A0A0U1RQJ8 604 aa16.3■□□□□ 0.2
RPRD1B-203ENST00000462548 ZNF233A6NK53 670 aa16.3■□□□□ 0.2
RPRD1B-203ENST00000462548 TREHO43280 583 aa16.3■□□□□ 0.2
RPRD1B-203ENST00000462548 PROZP22891 400 aa16.3■□□□□ 0.2
RPRD1B-203ENST00000462548 TNFSF9P41273 254 aa16.3■□□□□ 0.2
RPRD1B-203ENST00000462548 EPC2Q52LR7 807 aa16.3■□□□□ 0.2
RPRD1B-203ENST00000462548 CXCL17Q6UXB2 119 aa16.3■□□□□ 0.2
RPRD1B-203ENST00000462548 ZNF296Q8WUU4 475 aaPredicted RBP16.3■□□□□ 0.2
RPRD1B-203ENST00000462548 ATRIPQ8WXE1 791 aa16.3■□□□□ 0.2
RPRD1B-203ENST00000462548 MAP7D2Q96T17 732 aa16.3■□□□□ 0.2
RPRD1B-203ENST00000462548 PPP2R2CQ9Y2T4 447 aa16.3■□□□□ 0.2
RPRD1B-203ENST00000462548 CLDN3O15551 220 aa16.29■□□□□ 0.2
RPRD1B-203ENST00000462548 RARBP10826 455 aa16.29■□□□□ 0.2
RPRD1B-203ENST00000462548 NKX3-2P78367 333 aa16.29■□□□□ 0.2
RPRD1B-203ENST00000462548 PRPF4BQ13523 1007 aaKnown RBP16.29■□□□□ 0.2
RPRD1B-203ENST00000462548 MAP3K21Q5TCX8 1036 aa16.29■□□□□ 0.2
RPRD1B-203ENST00000462548 IQCEQ6IPM2 695 aa16.29■□□□□ 0.2
RPRD1B-203ENST00000462548 TSHZ1Q6ZSZ6 1077 aa16.29■□□□□ 0.2
RPRD1B-203ENST00000462548 ACRBPQ8NEB7 543 aa16.29■□□□□ 0.2
RPRD1B-203ENST00000462548 NLRP7Q8WX94 980 aa16.29■□□□□ 0.2
RPRD1B-203ENST00000462548 ZNF516Q92618 1163 aa16.29■□□□□ 0.2
RPRD1B-203ENST00000462548 ADAMTS10Q9H324 1103 aa16.29■□□□□ 0.2
RPRD1B-203ENST00000462548 CDHR5Q9HBB8 845 aa16.29■□□□□ 0.2
RPRD1B-203ENST00000462548 ARHGAP20Q9P2F6 1191 aa16.29■□□□□ 0.2
RPRD1B-203ENST00000462548 ADGRG1Q9Y653 693 aa16.29■□□□□ 0.2
RPRD1B-203ENST00000462548 PTPRJQ12913 1337 aa16.29■□□□□ 0.2
RPRD1B-203ENST00000462548 SCN10AQ9Y5Y9 1956 aa16.29■□□□□ 0.2
RPRD1B-203ENST00000462548 KIAA0391O15091 583 aaKnown RBP16.29■□□□□ 0.2
RPRD1B-203ENST00000462548 DLATP10515 647 aaKnown RBP16.29■□□□□ 0.2
RPRD1B-203ENST00000462548 CYP2C9P11712 490 aa16.29■□□□□ 0.2
RPRD1B-203ENST00000462548 HOXD10P28358 340 aa16.29■□□□□ 0.2
RPRD1B-203ENST00000462548 HOXC8P31273 242 aa16.29■□□□□ 0.2
RPRD1B-203ENST00000462548 MAP2K1Q02750 393 aaPredicted RBP16.29■□□□□ 0.2
RPRD1B-203ENST00000462548 MCL1Q07820 350 aa16.29■□□□□ 0.2
RPRD1B-203ENST00000462548 PSMD6Q15008 389 aa16.29■□□□□ 0.2
RPRD1B-203ENST00000462548 ATF7IP2Q5U623 682 aa16.29■□□□□ 0.2
RPRD1B-203ENST00000462548 LMBRD2Q68DH5 695 aaPredicted RBP16.29■□□□□ 0.2
RPRD1B-203ENST00000462548 EHBP1Q8NDI1 1231 aa16.29■□□□□ 0.2
RPRD1B-203ENST00000462548 KIAA1586Q9HCI6 787 aa16.29■□□□□ 0.2
RPRD1B-203ENST00000462548 PDE11AQ9HCR9 933 aa16.29■□□□□ 0.2
RPRD1B-203ENST00000462548 HMGCRP04035 888 aa16.28■□□□□ 0.2
RPRD1B-203ENST00000462548 MXI1P50539 228 aa16.28■□□□□ 0.2
RPRD1B-203ENST00000462548 FAM187BQ17R55 369 aa16.28■□□□□ 0.2
RPRD1B-203ENST00000462548 KIZQ2M2Z5 673 aa16.28■□□□□ 0.2
RPRD1B-203ENST00000462548 TSR1Q2NL82 804 aaKnown RBP16.28■□□□□ 0.2
RPRD1B-203ENST00000462548 HGSNATQ68CP4 663 aa16.28■□□□□ 0.2
RPRD1B-203ENST00000462548 SEMA4DQ92854 862 aa16.28■□□□□ 0.2
RPRD1B-203ENST00000462548 C16orf45Q96MC5 204 aaPredicted RBP16.28■□□□□ 0.2
RPRD1B-203ENST00000462548 TCHPQ9BT92 498 aa16.28■□□□□ 0.2
RPRD1B-203ENST00000462548 KATNAL1Q9BW62 490 aa16.28■□□□□ 0.2
RPRD1B-203ENST00000462548 XPNPEP3Q9NQH7 507 aa16.28■□□□□ 0.2
RPRD1B-203ENST00000462548 PRMT7Q9NVM4 692 aaPredicted RBP16.28■□□□□ 0.2
RPRD1B-203ENST00000462548 TSKSQ9UJT2 592 aa16.28■□□□□ 0.2
RPRD1B-203ENST00000462548 REXO2Q9Y3B8 237 aaKnown RBP16.28■□□□□ 0.2
RPRD1B-203ENST00000462548 SMIM35A0A1B0GVV1 85 aa16.28■□□□□ 0.2
RPRD1B-203ENST00000462548 GPR32O75388 356 aa16.28■□□□□ 0.2
RPRD1B-203ENST00000462548 FGFR4P22455 802 aa16.28■□□□□ 0.2
RPRD1B-203ENST00000462548 CDK17Q00537 523 aa16.28■□□□□ 0.2
RPRD1B-203ENST00000462548 PHLDB3Q6NSJ2 640 aa16.28■□□□□ 0.2
RPRD1B-203ENST00000462548 MPZL3Q6UWV2 235 aa16.28■□□□□ 0.2
RPRD1B-203ENST00000462548 CEP120Q8N960 986 aa16.28■□□□□ 0.2
RPRD1B-203ENST00000462548 RAET1EQ8TD07 263 aa16.28■□□□□ 0.2
RPRD1B-203ENST00000462548 DNAJB3Q8WWF6 145 aa16.28■□□□□ 0.2
RPRD1B-203ENST00000462548 MTG1Q9BT17 334 aaPredicted RBP16.28■□□□□ 0.2
RPRD1B-203ENST00000462548 NHEJ1Q9H9Q4 299 aaPredicted RBP16.28■□□□□ 0.2
RPRD1B-203ENST00000462548 ZNHIT6Q9NWK9 470 aaKnown RBP16.28■□□□□ 0.2
RPRD1B-203ENST00000462548 RBAKQ9NYW8 714 aaPredicted RBP16.28■□□□□ 0.2
RPRD1B-203ENST00000462548 FBXL5Q9UKA1 691 aa16.28■□□□□ 0.2
RPRD1B-203ENST00000462548 CNTNAP2Q9UHC6 1331 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms