RNA–Protein interactions for RNA: ENST00000462523.5

XPA-202, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 5

Gene XPA, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-202ENST00000462523 CD44P16070 742 aaKnown RBP21.02■□□□□ 0.96
XPA-202ENST00000462523 PRCPP42785 496 aa21.02■□□□□ 0.96
XPA-202ENST00000462523 RAB27AP51159 221 aa21.02■□□□□ 0.96
XPA-202ENST00000462523 NOLC1Q14978 699 aaKnown RBP eCLIP21.02■□□□□ 0.96
XPA-202ENST00000462523 KNOP1Q1ED39 458 aaKnown RBP21.02■□□□□ 0.96
XPA-202ENST00000462523 COBLL1Q53SF7 1204 aa21.02■□□□□ 0.96
XPA-202ENST00000462523 CCDC183Q5T5S1 534 aa21.02■□□□□ 0.96
XPA-202ENST00000462523 FAM117BQ6P1L5 589 aa21.02■□□□□ 0.96
XPA-202ENST00000462523 AGMOQ6ZNB7 445 aa21.02■□□□□ 0.96
XPA-202ENST00000462523 NPAS4Q8IUM7 802 aa21.02■□□□□ 0.96
XPA-202ENST00000462523 TMEM192Q8IY95 271 aa21.02■□□□□ 0.96
XPA-202ENST00000462523 SYCP3Q8IZU3 236 aa21.02■□□□□ 0.96
XPA-202ENST00000462523 GUF1Q8N442 669 aaKnown RBP21.02■□□□□ 0.96
XPA-202ENST00000462523 ADPGKQ9BRR6 497 aa21.02■□□□□ 0.96
XPA-202ENST00000462523 ELAC1Q9H777 363 aaKnown RBP21.02■□□□□ 0.96
XPA-202ENST00000462523 RC3H2Q9HBD1 1191 aaKnown RBP21.02■□□□□ 0.96
XPA-202ENST00000462523 FNDC1Q4ZHG4 1894 aaPredicted RBP21.02■□□□□ 0.96
XPA-202ENST00000462523 CLDN3O15551 220 aa21.02■□□□□ 0.95
XPA-202ENST00000462523 GJB5O95377 273 aa21.02■□□□□ 0.95
XPA-202ENST00000462523 MCF2P10911 925 aa21.02■□□□□ 0.95
XPA-202ENST00000462523 FGFR1P11362 822 aa21.02■□□□□ 0.95
XPA-202ENST00000462523 PTMSP20962 102 aa21.02■□□□□ 0.95
XPA-202ENST00000462523 DCAF4L1Q3SXM0 396 aa21.02■□□□□ 0.95
XPA-202ENST00000462523 SEZ6Q53EL9 994 aa21.02■□□□□ 0.95
XPA-202ENST00000462523 ZBTB41Q5SVQ8 909 aa21.02■□□□□ 0.95
XPA-202ENST00000462523 CAVIN1Q6NZI2 390 aaKnown RBP21.02■□□□□ 0.95
XPA-202ENST00000462523 HERC6Q8IVU3 1022 aa21.02■□□□□ 0.95
XPA-202ENST00000462523 RNF169Q8NCN4 708 aa21.02■□□□□ 0.95
XPA-202ENST00000462523 ZSWIM2Q8NEG5 633 aa21.02■□□□□ 0.95
XPA-202ENST00000462523 PHOSPHO2Q8TCD6 241 aa21.02■□□□□ 0.95
XPA-202ENST00000462523 CBWD1Q9BRT8 395 aa21.02■□□□□ 0.95
XPA-202ENST00000462523 TCHPQ9BT92 498 aa21.02■□□□□ 0.95
XPA-202ENST00000462523 TRIM6Q9C030 488 aaPredicted RBP21.02■□□□□ 0.95
XPA-202ENST00000462523 GBP3Q9H0R5 595 aa21.02■□□□□ 0.95
XPA-202ENST00000462523 MEFVO15553 781 aaPredicted RBP21.01■□□□□ 0.95
XPA-202ENST00000462523 EOMESO95936 686 aa21.01■□□□□ 0.95
XPA-202ENST00000462523 HARSP12081 509 aaKnown RBP21.01■□□□□ 0.95
XPA-202ENST00000462523 GATMP50440 423 aa21.01■□□□□ 0.95
XPA-202ENST00000462523 CLLU1OSQ5K130 101 aa21.01■□□□□ 0.95
XPA-202ENST00000462523 ADSSL1Q8N142 457 aa21.01■□□□□ 0.95
XPA-202ENST00000462523 AGPAT3Q9NRZ7 376 aa21.01■□□□□ 0.95
XPA-202ENST00000462523 PCDHB7Q9Y5E2 793 aa21.01■□□□□ 0.95
XPA-202ENST00000462523 CHD7Q9P2D1 2997 aa21■□□□□ 0.95
XPA-202ENST00000462523 DGKIO75912 1065 aa21■□□□□ 0.95
XPA-202ENST00000462523 SKIP12755 728 aa21■□□□□ 0.95
XPA-202ENST00000462523 AKAP5P24588 427 aa21■□□□□ 0.95
XPA-202ENST00000462523 AFF1P51825 1210 aaKnown RBP21■□□□□ 0.95
XPA-202ENST00000462523 RABGGTBP53611 331 aa21■□□□□ 0.95
XPA-202ENST00000462523 TRIML1Q8N9V2 468 aa21■□□□□ 0.95
XPA-202ENST00000462523 ZNF689Q96CS4 500 aaPredicted RBP21■□□□□ 0.95
XPA-202ENST00000462523 APOL6Q9BWW8 343 aa21■□□□□ 0.95
XPA-202ENST00000462523 CXCL16Q9H2A7 254 aa21■□□□□ 0.95
XPA-202ENST00000462523 SNTG2Q9NY99 539 aa21■□□□□ 0.95
XPA-202ENST00000462523 PPP1R3GB7ZBB8 358 aa20.99■□□□□ 0.95
XPA-202ENST00000462523 TNFSF9P41273 254 aa20.99■□□□□ 0.95
XPA-202ENST00000462523 GRM5P41594 1212 aa20.99■□□□□ 0.95
XPA-202ENST00000462523 OSTNP61366 133 aa20.99■□□□□ 0.95
XPA-202ENST00000462523 ZCWPW2Q504Y3 356 aa20.99■□□□□ 0.95
XPA-202ENST00000462523 THNSL1Q8IYQ7 743 aa20.99■□□□□ 0.95
XPA-202ENST00000462523 MSTO1Q9BUK6 570 aa20.99■□□□□ 0.95
XPA-202ENST00000462523 SEMA6BQ9H3T3 888 aa20.99■□□□□ 0.95
XPA-202ENST00000462523 LRFN2Q9ULH4 789 aa20.99■□□□□ 0.95
XPA-202ENST00000462523 CDH23Q9H251 3354 aa20.99■□□□□ 0.95
XPA-202ENST00000462523 CLIC2O15247 247 aa20.98■□□□□ 0.95
XPA-202ENST00000462523 STAG3L1P0CL83 205 aa20.98■□□□□ 0.95
XPA-202ENST00000462523 MATR3P43243 847 aaKnown RBP eCLIP20.98■□□□□ 0.95
XPA-202ENST00000462523 HTRA4P83105 476 aaPredicted RBP20.98■□□□□ 0.95
XPA-202ENST00000462523 SLFN12LQ6IEE8 588 aa20.98■□□□□ 0.95
XPA-202ENST00000462523 CRELD2Q6UXH1 353 aaPredicted RBP20.98■□□□□ 0.95
XPA-202ENST00000462523 POMGNT1Q8WZA1 660 aa20.98■□□□□ 0.95
XPA-202ENST00000462523 PCIF1Q9H4Z3 704 aa20.98■□□□□ 0.95
XPA-202ENST00000462523 TYW1Q9NV66 732 aaKnown RBP20.98■□□□□ 0.95
XPA-202ENST00000462523 TRIP11Q15643 1979 aa20.98■□□□□ 0.95
XPA-202ENST00000462523 A0A1W2PPC1 479 aa20.97■□□□□ 0.95
XPA-202ENST00000462523 OGTO15294 1046 aa20.97■□□□□ 0.95
XPA-202ENST00000462523 RECQL4O94761 1208 aa20.97■□□□□ 0.95
XPA-202ENST00000462523 ITGA4P13612 1032 aa20.97■□□□□ 0.95
XPA-202ENST00000462523 MYOGP15173 224 aa20.97■□□□□ 0.95
XPA-202ENST00000462523 GARTP22102 1010 aa20.97■□□□□ 0.95
XPA-202ENST00000462523 PMS1P54277 932 aaKnown RBP20.97■□□□□ 0.95
XPA-202ENST00000462523 GSTCDQ8NEC7 633 aa20.97■□□□□ 0.95
XPA-202ENST00000462523 HELQQ8TDG4 1101 aa20.97■□□□□ 0.95
XPA-202ENST00000462523 PGBD4Q96DM1 585 aa20.97■□□□□ 0.95
XPA-202ENST00000462523 CASD1Q96PB1 797 aa20.97■□□□□ 0.95
XPA-202ENST00000462523 GTPBP4Q9BZE4 634 aaKnown RBP20.97■□□□□ 0.95
XPA-202ENST00000462523 AGO2Q9UKV8 859 aaKnown RBP20.97■□□□□ 0.95
XPA-202ENST00000462523 ANK1P16157 1881 aa20.97■□□□□ 0.95
XPA-202ENST00000462523 TRIOBPQ9H2D6 2365 aa20.97■□□□□ 0.95
XPA-202ENST00000462523 CITO14578 2027 aa20.97■□□□□ 0.95
XPA-202ENST00000462523 RALGAPA2Q2PPJ7 1873 aa20.97■□□□□ 0.95
XPA-202ENST00000462523 PDXKO00764 312 aa20.97■□□□□ 0.95
XPA-202ENST00000462523 OFD1O75665 1012 aa20.97■□□□□ 0.95
XPA-202ENST00000462523 PBX2P40425 430 aa20.97■□□□□ 0.95
XPA-202ENST00000462523 ACOT2P49753 483 aa20.97■□□□□ 0.95
XPA-202ENST00000462523 DPCR1Q3MIW9 517 aa20.97■□□□□ 0.95
XPA-202ENST00000462523 CENPPQ6IPU0 288 aa20.97■□□□□ 0.95
XPA-202ENST00000462523 ARMCX5Q6P1M9 558 aa20.97■□□□□ 0.95
XPA-202ENST00000462523 SAAL1Q96ER3 474 aa20.97■□□□□ 0.95
XPA-202ENST00000462523 ZFP42Q96MM3 310 aa20.97■□□□□ 0.95
XPA-202ENST00000462523 RSAD1Q9HA92 442 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms