RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 CACNA1FO60840 1977 aa6.17□□□□□ -1.42
COPS3-204ENST00000462236 LRRC10BA6NIK2 292 aa6.17□□□□□ -1.42
COPS3-204ENST00000462236 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.17□□□□□ -1.42
COPS3-204ENST00000462236 ALG1L2C9J202 215 aa6.17□□□□□ -1.42
COPS3-204ENST00000462236 BUB1BO60566 1050 aaPredicted RBP6.17□□□□□ -1.42
COPS3-204ENST00000462236 FAHP16930 419 aa6.17□□□□□ -1.42
COPS3-204ENST00000462236 PFKLP17858 780 aa6.17□□□□□ -1.42
COPS3-204ENST00000462236 FNTBP49356 437 aa6.17□□□□□ -1.42
COPS3-204ENST00000462236 KPNA1P52294 538 aaPredicted RBP6.17□□□□□ -1.42
COPS3-204ENST00000462236 CAP1Q01518 475 aa6.17□□□□□ -1.42
COPS3-204ENST00000462236 CACNB2Q08289 660 aaPredicted RBP6.17□□□□□ -1.42
COPS3-204ENST00000462236 STRN3Q13033 797 aa6.17□□□□□ -1.42
COPS3-204ENST00000462236 DCTN1Q14203 1278 aa6.17□□□□□ -1.42
COPS3-204ENST00000462236 PAN2Q504Q3 1202 aaKnown RBP6.17□□□□□ -1.42
COPS3-204ENST00000462236 GPR158Q5T848 1215 aa6.17□□□□□ -1.42
COPS3-204ENST00000462236 CREB3L3Q68CJ9 461 aa6.17□□□□□ -1.42
COPS3-204ENST00000462236 MCTP1Q6DN14 999 aa6.17□□□□□ -1.42
COPS3-204ENST00000462236 MOB2Q70IA6 237 aa6.17□□□□□ -1.42
COPS3-204ENST00000462236 NECAB2Q7Z6G3 386 aa6.17□□□□□ -1.42
COPS3-204ENST00000462236 STRA8Q7Z7C7 330 aa6.17□□□□□ -1.42
COPS3-204ENST00000462236 ZZZ3Q8IYH5 903 aa6.17□□□□□ -1.42
COPS3-204ENST00000462236 UBR7Q8N806 425 aa6.17□□□□□ -1.42
COPS3-204ENST00000462236 ARRDC4Q8NCT1 418 aa6.17□□□□□ -1.42
COPS3-204ENST00000462236 YIPF4Q9BSR8 244 aa6.17□□□□□ -1.42
COPS3-204ENST00000462236 UTP14AQ9BVJ6 771 aaKnown RBP6.17□□□□□ -1.42
COPS3-204ENST00000462236 CD244Q9BZW8 370 aa6.17□□□□□ -1.42
COPS3-204ENST00000462236 DBNDD1Q9H9R9 158 aa6.17□□□□□ -1.42
COPS3-204ENST00000462236 RXFP1Q9HBX9 757 aa6.17□□□□□ -1.42
COPS3-204ENST00000462236 TYW1Q9NV66 732 aaKnown RBP6.17□□□□□ -1.42
COPS3-204ENST00000462236 OXSMQ9NWU1 459 aa6.17□□□□□ -1.42
COPS3-204ENST00000462236 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.17□□□□□ -1.42
COPS3-204ENST00000462236 TELO2Q9Y4R8 837 aa6.17□□□□□ -1.42
COPS3-204ENST00000462236 ZNF891A8MT65 544 aaPredicted RBP6.16□□□□□ -1.42
COPS3-204ENST00000462236 ECE2O60344 883 aa6.16□□□□□ -1.42
COPS3-204ENST00000462236 ULK1O75385 1050 aa6.16□□□□□ -1.42
COPS3-204ENST00000462236 FKBP9O95302 570 aa6.16□□□□□ -1.42
COPS3-204ENST00000462236 C4BPAP04003 597 aaKnown RBP6.16□□□□□ -1.42
COPS3-204ENST00000462236 ASGR2P07307 311 aa6.16□□□□□ -1.42
COPS3-204ENST00000462236 CDK11BP21127 795 aaKnown RBP6.16□□□□□ -1.42
COPS3-204ENST00000462236 IL2P60568 153 aa6.16□□□□□ -1.42
COPS3-204ENST00000462236 PHC1P78364 1004 aa6.16□□□□□ -1.42
COPS3-204ENST00000462236 NKX3-2P78367 333 aa6.16□□□□□ -1.42
COPS3-204ENST00000462236 ZNF200P98182 395 aaPredicted RBP6.16□□□□□ -1.42
COPS3-204ENST00000462236 KIF6Q6ZMV9 814 aa6.16□□□□□ -1.42
COPS3-204ENST00000462236 PRR23BQ6ZRT6 265 aa6.16□□□□□ -1.42
COPS3-204ENST00000462236 FKBP9P1Q75LS8 142 aa6.16□□□□□ -1.42
COPS3-204ENST00000462236 DDX42Q86XP3 938 aaKnown RBP eCLIP6.16□□□□□ -1.42
COPS3-204ENST00000462236 NXPE1Q8N323 547 aa6.16□□□□□ -1.42
COPS3-204ENST00000462236 NGEFQ8N5V2 710 aa6.16□□□□□ -1.42
COPS3-204ENST00000462236 AGBL3Q8NEM8 1001 aa6.16□□□□□ -1.42
COPS3-204ENST00000462236 ATL2Q8NHH9 583 aa6.16□□□□□ -1.42
COPS3-204ENST00000462236 DDX11Q96FC9 970 aa6.16□□□□□ -1.42
COPS3-204ENST00000462236 TMX4Q9H1E5 349 aaPredicted RBP6.16□□□□□ -1.42
COPS3-204ENST00000462236 PRO3102Q9H379 93 aa6.16□□□□□ -1.42
COPS3-204ENST00000462236 PCIF1Q9H4Z3 704 aa6.16□□□□□ -1.42
COPS3-204ENST00000462236 MBD1Q9UIS9 605 aaPredicted RBP6.16□□□□□ -1.42
COPS3-204ENST00000462236 MUC3AQ02505 3323 aa6.15□□□□□ -1.42
COPS3-204ENST00000462236 SSC5DA1L4H1 1573 aa6.15□□□□□ -1.42
COPS3-204ENST00000462236 MYOCOSA0A1B0GUC4 107 aa6.15□□□□□ -1.42
COPS3-204ENST00000462236 FAM90A27PA6NNH2 459 aa6.15□□□□□ -1.42
COPS3-204ENST00000462236 UBE2Q2LH0YL09 131 aa6.15□□□□□ -1.42
COPS3-204ENST00000462236 NEMP1O14524 444 aa6.15□□□□□ -1.42
COPS3-204ENST00000462236 GPR39O43194 453 aa6.15□□□□□ -1.42
COPS3-204ENST00000462236 EN2P19622 333 aaPredicted RBP6.15□□□□□ -1.42
COPS3-204ENST00000462236 ADCYAP1R1P41586 468 aa6.15□□□□□ -1.42
COPS3-204ENST00000462236 LRRC32Q14392 662 aa6.15□□□□□ -1.42
COPS3-204ENST00000462236 STAT4Q14765 748 aa6.15□□□□□ -1.42
COPS3-204ENST00000462236 SF3B3Q15393 1217 aaKnown RBP6.15□□□□□ -1.42
COPS3-204ENST00000462236 MLANAQ16655 118 aa6.15□□□□□ -1.42
COPS3-204ENST00000462236 TEPPQ6URK8 271 aa6.15□□□□□ -1.42
COPS3-204ENST00000462236 SPATS2Q86XZ4 545 aaKnown RBP6.15□□□□□ -1.42
COPS3-204ENST00000462236 KIAA1958Q8N8K9 716 aa6.15□□□□□ -1.42
COPS3-204ENST00000462236 WDR66Q8TBY9 1149 aa6.15□□□□□ -1.42
COPS3-204ENST00000462236 CHTF18Q8WVB6 975 aa6.15□□□□□ -1.42
COPS3-204ENST00000462236 CELF1Q92879 486 aaKnown RBP6.15□□□□□ -1.42
COPS3-204ENST00000462236 E2F7Q96AV8 911 aa6.15□□□□□ -1.42
COPS3-204ENST00000462236 DIRC2Q96SL1 478 aa6.15□□□□□ -1.42
COPS3-204ENST00000462236 CNTD2Q9H8S5 307 aa6.15□□□□□ -1.42
COPS3-204ENST00000462236 RIC8BQ9NVN3 520 aa6.15□□□□□ -1.42
COPS3-204ENST00000462236 THG1LQ9NWX6 298 aaKnown RBP6.15□□□□□ -1.42
COPS3-204ENST00000462236 MIS18AQ9NYP9 233 aa6.15□□□□□ -1.42
COPS3-204ENST00000462236 PTPN22Q9Y2R2 807 aa6.15□□□□□ -1.42
COPS3-204ENST00000462236 RRP7AQ9Y3A4 280 aaKnown RBP6.15□□□□□ -1.42
COPS3-204ENST00000462236 PCDHA5Q9Y5H7 936 aa6.15□□□□□ -1.42
COPS3-204ENST00000462236 HCFC2Q9Y5Z7 792 aa6.15□□□□□ -1.42
COPS3-204ENST00000462236 ARAP2Q8WZ64 1704 aa6.15□□□□□ -1.42
COPS3-204ENST00000462236 PTPRFP10586 1907 aa6.15□□□□□ -1.43
COPS3-204ENST00000462236 PRUNE2Q8WUY3 3088 aa6.14□□□□□ -1.43
COPS3-204ENST00000462236 LAMA2P24043 3122 aaKnown RBP6.14□□□□□ -1.43
COPS3-204ENST00000462236 ACOT7O00154 380 aa6.14□□□□□ -1.43
COPS3-204ENST00000462236 SCDO00767 359 aa6.14□□□□□ -1.43
COPS3-204ENST00000462236 N4BP3O15049 544 aa6.14□□□□□ -1.43
COPS3-204ENST00000462236 LRG1P02750 347 aa6.14□□□□□ -1.43
COPS3-204ENST00000462236 LTFP02788 710 aa6.14□□□□□ -1.43
COPS3-204ENST00000462236 HMGB1P09429 215 aaKnown RBP6.14□□□□□ -1.43
COPS3-204ENST00000462236 MYL6BP14649 208 aa6.14□□□□□ -1.43
COPS3-204ENST00000462236 KIF11P52732 1056 aa6.14□□□□□ -1.43
COPS3-204ENST00000462236 GPSM2P81274 684 aa6.14□□□□□ -1.43
COPS3-204ENST00000462236 ADCY1Q08828 1119 aa6.14□□□□□ -1.43
COPS3-204ENST00000462236 SREBF2Q12772 1141 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms