RNA–Protein interactions for RNA: ENST00000461841.7

CDH23-208, Transcript of cadherin related 23, human

TSL 5 BASIC

Gene CDH23, Length 2,000 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDH23-208	ENST00000461841	METTL13	Q8N6R0	699 aa		27.57	■■■□□ 2
CDH23-208	ENST00000461841	SALL4	Q9UJQ4	1053 aa		27.57	■■■□□ 2
CDH23-208	ENST00000461841	CDC23	Q9UJX2	597 aa		27.57	■■■□□ 2
CDH23-208	ENST00000461841	MAP2K5	Q13163	448 aa		27.56	■■■□□ 2
CDH23-208	ENST00000461841	MSTO1	Q9BUK6	570 aa		27.56	■■■□□ 2
CDH23-208	ENST00000461841	PCNT	O95613	3336 aa		27.56	■■■□□ 2
CDH23-208	ENST00000461841	ADCY6	O43306	1168 aa		27.55	■■■□□ 2
CDH23-208	ENST00000461841	CLCN3	P51790	818 aa		27.55	■■■□□ 2
CDH23-208	ENST00000461841	INHBE	P58166	350 aa		27.55	■■■□□ 2
CDH23-208	ENST00000461841	IGBP1	P78318	339 aa		27.55	■■■□□ 2
CDH23-208	ENST00000461841	AMPD2	Q01433	879 aa		27.55	■■■□□ 2
CDH23-208	ENST00000461841	TUBB2A	Q13885	445 aa		27.55	■■■□□ 2
CDH23-208	ENST00000461841	PSMD6	Q15008	389 aa		27.55	■■■□□ 2
CDH23-208	ENST00000461841	FMNL3	Q8IVF7	1028 aa		27.55	■■■□□ 2
CDH23-208	ENST00000461841	ZNF710	Q8N1W2	664 aa		27.55	■■■□□ 2
CDH23-208	ENST00000461841	FBXL13	Q8NEE6	735 aa		27.55	■■■□□ 2
CDH23-208	ENST00000461841	MNS1	Q8NEH6	495 aa		27.55	■■■□□ 2
CDH23-208	ENST00000461841	TAS1R2	Q8TE23	839 aa		27.55	■■■□□ 2
CDH23-208	ENST00000461841	TUBB2B	Q9BVA1	445 aa		27.55	■■■□□ 2
CDH23-208	ENST00000461841	NAGPA	Q9UK23	515 aa		27.55	■■■□□ 2
CDH23-208	ENST00000461841	ENC1	O14682	589 aa		27.55	■■■□□ 2
CDH23-208	ENST00000461841	LDHA	P00338	332 aa	Known RBP	27.55	■■■□□ 2
CDH23-208	ENST00000461841	GPC3	P51654	580 aa		27.55	■■■□□ 2
CDH23-208	ENST00000461841	WNT7B	P56706	349 aa		27.55	■■■□□ 2
CDH23-208	ENST00000461841	ZBTB41	Q5SVQ8	909 aa		27.55	■■■□□ 2
CDH23-208	ENST00000461841	ZBTB8OS	Q8IWT0	167 aa		27.55	■■■□□ 2
CDH23-208	ENST00000461841	ZNF516	Q92618	1163 aa		27.55	■■■□□ 2
CDH23-208	ENST00000461841	MRPL4	Q9BYD3	311 aa	Known RBP	27.55	■■■□□ 2
CDH23-208	ENST00000461841	CAPN6	Q9Y6Q1	641 aa		27.55	■■■□□ 2
CDH23-208	ENST00000461841		H3BRB1	525 aa		27.54	■■■□□ 2
CDH23-208	ENST00000461841	HOXD8	P13378	290 aa	Predicted RBP	27.54	■■■□□ 2
CDH23-208	ENST00000461841	MATR3	P43243	847 aa	Known RBP eCLIP	27.54	■■■□□ 2
CDH23-208	ENST00000461841	NAB2	Q15742	525 aa		27.54	■■■□□ 2
CDH23-208	ENST00000461841	KIAA0753	Q2KHM9	967 aa		27.54	■■■□□ 2
CDH23-208	ENST00000461841	C10orf76	Q5T2E6	689 aa		27.54	■■■□□ 2
CDH23-208	ENST00000461841	C15orf39	Q6ZRI6	1047 aa		27.54	■■■□□ 2
CDH23-208	ENST00000461841	VPS36	Q86VN1	386 aa		27.54	■■■□□ 2
CDH23-208	ENST00000461841	TRIM58	Q8NG06	486 aa		27.54	■■■□□ 2
CDH23-208	ENST00000461841	PACSIN1	Q9BY11	444 aa		27.54	■■■□□ 2
CDH23-208	ENST00000461841	C2orf40	Q9H1Z8	148 aa		27.54	■■■□□ 2
CDH23-208	ENST00000461841	TUT1	Q9H6E5	874 aa	Known RBP	27.54	■■■□□ 2
CDH23-208	ENST00000461841	RAB20	Q9NX57	234 aa		27.54	■■■□□ 2
CDH23-208	ENST00000461841	NENF	Q9UMX5	172 aa		27.54	■■■□□ 2
CDH23-208	ENST00000461841	CLDN3	O15551	220 aa		27.53	■■■□□ 2
CDH23-208	ENST00000461841	MOCS3	O95396	460 aa		27.53	■■■□□ 2
CDH23-208	ENST00000461841	MMP3	P08254	477 aa		27.53	■■■□□ 2
CDH23-208	ENST00000461841	CCDC172	P0C7W6	258 aa		27.53	■■■□□ 2
CDH23-208	ENST00000461841	KLRC1	P26715	233 aa		27.53	■■■□□ 2
CDH23-208	ENST00000461841	BMS1	Q14692	1282 aa	Known RBP	27.53	■■■□□ 2
CDH23-208	ENST00000461841	MAPK6	Q16659	721 aa		27.53	■■■□□ 2
CDH23-208	ENST00000461841	OLIG1	Q8TAK6	271 aa		27.53	■■■□□ 2
CDH23-208	ENST00000461841	VTI1A	Q96AJ9	217 aa		27.53	■■■□□ 2
CDH23-208	ENST00000461841	NLRP4	Q96MN2	994 aa		27.53	■■■□□ 2
CDH23-208	ENST00000461841	PDE11A	Q9HCR9	933 aa		27.53	■■■□□ 2
CDH23-208	ENST00000461841	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	27.53	■■■□□ 2
CDH23-208	ENST00000461841	EVPL	Q92817	2033 aa		27.53	■■■□□ 2
CDH23-208	ENST00000461841	FAM155A	B1AL88	458 aa	Predicted RBP	27.53	■■■□□ 2
CDH23-208	ENST00000461841	DDX3X	O00571	662 aa	Known RBP eCLIP	27.53	■■■□□ 2
CDH23-208	ENST00000461841	TOM1L1	O75674	476 aa		27.53	■■■□□ 2
CDH23-208	ENST00000461841	ATP1A1	P05023	1023 aa	Known RBP	27.53	■■■□□ 2
CDH23-208	ENST00000461841	PRKCB	P05771	671 aa		27.53	■■■□□ 2
CDH23-208	ENST00000461841	HOXC6	P09630	235 aa		27.53	■■■□□ 2
CDH23-208	ENST00000461841	TFDP1	Q14186	410 aa		27.53	■■■□□ 2
CDH23-208	ENST00000461841	PRAMEF19	Q5SWL8	479 aa		27.53	■■■□□ 2
CDH23-208	ENST00000461841	ALKBH5	Q6P6C2	394 aa	Known RBP	27.53	■■■□□ 2
CDH23-208	ENST00000461841	RNF10	Q8N5U6	811 aa	Known RBP	27.53	■■■□□ 2
CDH23-208	ENST00000461841	OR6J1	Q8NGC5	347 aa		27.53	■■■□□ 2
CDH23-208	ENST00000461841	KAT5	Q92993	513 aa		27.53	■■■□□ 2
CDH23-208	ENST00000461841	ZNF668	Q96K58	619 aa	Predicted RBP	27.53	■■■□□ 2
CDH23-208	ENST00000461841	ACO2	Q99798	780 aa	Known RBP	27.53	■■■□□ 2
CDH23-208	ENST00000461841	SYT11	Q9BT88	431 aa		27.53	■■■□□ 2
CDH23-208	ENST00000461841	RBAK	Q9NYW8	714 aa	Predicted RBP	27.53	■■■□□ 2
CDH23-208	ENST00000461841	FLRT1	Q9NZU1	646 aa		27.53	■■■□□ 2
CDH23-208	ENST00000461841	DCAF8L1	A6NGE4	600 aa		27.52	■■■□□ 2
CDH23-208	ENST00000461841	ASAP2	O43150	1006 aa		27.52	■■■□□ 2
CDH23-208	ENST00000461841	TACC1	O75410	805 aa		27.52	■■■□□ 2
CDH23-208	ENST00000461841	TNFAIP2	Q03169	654 aa		27.52	■■■□□ 2
CDH23-208	ENST00000461841	HSP90AA2P	Q14568	343 aa	Predicted RBP	27.52	■■■□□ 2
CDH23-208	ENST00000461841	KIF22	Q14807	665 aa		27.52	■■■□□ 2
CDH23-208	ENST00000461841	PAPD7	Q5XG87	772 aa	Known RBP	27.52	■■■□□ 2
CDH23-208	ENST00000461841	SLC30A5	Q8TAD4	765 aa		27.52	■■■□□ 2
CDH23-208	ENST00000461841	ANKRD7	Q92527	254 aa		27.52	■■■□□ 2
CDH23-208	ENST00000461841	USP6NL	Q92738	828 aa		27.52	■■■□□ 2
CDH23-208	ENST00000461841	FAM84A	Q96KN4	292 aa		27.52	■■■□□ 2
CDH23-208	ENST00000461841	FNBP1	Q96RU3	617 aa		27.52	■■■□□ 2
CDH23-208	ENST00000461841	HDAC6	Q9UBN7	1215 aa		27.52	■■■□□ 2
CDH23-208	ENST00000461841	MAGEB2	O15479	319 aa		27.51	■■■□□ 2
CDH23-208	ENST00000461841	TADA3	O75528	432 aa		27.51	■■■□□ 2
CDH23-208	ENST00000461841	ERCC6L	Q2NKX8	1250 aa		27.51	■■■□□ 2
CDH23-208	ENST00000461841	TLL2	Q9Y6L7	1015 aa		27.51	■■■□□ 2
CDH23-208	ENST00000461841	PTEN	P60484	403 aa		27.51	■■□□□ 1.99
CDH23-208	ENST00000461841	RBM10	P98175	930 aa	Known RBP	27.51	■■□□□ 1.99
CDH23-208	ENST00000461841	DGKD	Q16760	1214 aa		27.51	■■□□□ 1.99
CDH23-208	ENST00000461841	TRAPPC11	Q7Z392	1133 aa		27.51	■■□□□ 1.99
CDH23-208	ENST00000461841	PPM1K	Q8N3J5	372 aa		27.51	■■□□□ 1.99
CDH23-208	ENST00000461841	LINC01465	Q8N7H1	131 aa		27.51	■■□□□ 1.99
CDH23-208	ENST00000461841	KREMEN1	Q96MU8	473 aa		27.51	■■□□□ 1.99
CDH23-208	ENST00000461841	FZD8	Q9H461	694 aa		27.51	■■□□□ 1.99
CDH23-208	ENST00000461841	ANO9	A1A5B4	782 aa		27.5	■■□□□ 1.99
CDH23-208	ENST00000461841	EFCAB8	A8MWE9	144 aa		27.5	■■□□□ 1.99

Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms