RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 HAUS3Q68CZ6 603 aa10.14□□□□□ -0.79
BRCA1-207ENST00000461798 LLGL2Q6P1M3 1020 aa10.14□□□□□ -0.79
BRCA1-207ENST00000461798 SLC27A1Q6PCB7 646 aa10.14□□□□□ -0.79
BRCA1-207ENST00000461798 BMP8AQ7Z5Y6 402 aa10.14□□□□□ -0.79
BRCA1-207ENST00000461798 PPFIBP1Q86W92 1011 aa10.14□□□□□ -0.79
BRCA1-207ENST00000461798 GPR65Q8IYL9 337 aa10.14□□□□□ -0.79
BRCA1-207ENST00000461798 HACE1Q8IYU2 909 aa10.14□□□□□ -0.79
BRCA1-207ENST00000461798 RNF168Q8IYW5 571 aaPredicted RBP10.14□□□□□ -0.79
BRCA1-207ENST00000461798 GSTCDQ8NEC7 633 aa10.14□□□□□ -0.79
BRCA1-207ENST00000461798 NECTIN4Q96NY8 510 aa10.14□□□□□ -0.79
BRCA1-207ENST00000461798 KLHL5Q96PQ7 755 aa10.14□□□□□ -0.79
BRCA1-207ENST00000461798 FAM193BQ96PV7 902 aaPredicted RBP10.14□□□□□ -0.79
BRCA1-207ENST00000461798 GAD1Q99259 594 aa10.14□□□□□ -0.79
BRCA1-207ENST00000461798 GBP3Q9H0R5 595 aa10.14□□□□□ -0.79
BRCA1-207ENST00000461798 C2orf40Q9H1Z8 148 aa10.14□□□□□ -0.79
BRCA1-207ENST00000461798 DZANK1Q9NVP4 752 aa10.14□□□□□ -0.79
BRCA1-207ENST00000461798 LRWD1Q9UFC0 647 aa10.14□□□□□ -0.79
BRCA1-207ENST00000461798 MUTYHQ9UIF7 546 aa10.14□□□□□ -0.79
BRCA1-207ENST00000461798 KIF3AQ9Y496 699 aa10.14□□□□□ -0.79
BRCA1-207ENST00000461798 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.13□□□□□ -0.79
BRCA1-207ENST00000461798 ARHGEF35A5YM69 484 aa10.13□□□□□ -0.79
BRCA1-207ENST00000461798 LRRIQ4A6NIV6 560 aa10.13□□□□□ -0.79
BRCA1-207ENST00000461798 ACKR2O00590 384 aa10.13□□□□□ -0.79
BRCA1-207ENST00000461798 SOD2P04179 222 aa10.13□□□□□ -0.79
BRCA1-207ENST00000461798 CCT6AP40227 531 aaKnown RBP10.13□□□□□ -0.79
BRCA1-207ENST00000461798 PRPHP41219 470 aa10.13□□□□□ -0.79
BRCA1-207ENST00000461798 NAMPTP43490 491 aa10.13□□□□□ -0.79
BRCA1-207ENST00000461798 MCM2P49736 904 aa10.13□□□□□ -0.79
BRCA1-207ENST00000461798 PPP2R5AQ15172 486 aa10.13□□□□□ -0.79
BRCA1-207ENST00000461798 CES5AQ6NT32 575 aa10.13□□□□□ -0.79
BRCA1-207ENST00000461798 TMEM92Q6UXU6 159 aa10.13□□□□□ -0.79
BRCA1-207ENST00000461798 MAEAQ7L5Y9 396 aa10.13□□□□□ -0.79
BRCA1-207ENST00000461798 ZBTB8OSQ8IWT0 167 aa10.13□□□□□ -0.79
BRCA1-207ENST00000461798 KCTD17Q8N5Z5 321 aa10.13□□□□□ -0.79
BRCA1-207ENST00000461798 AUTS2Q8WXX7 1259 aa10.13□□□□□ -0.79
BRCA1-207ENST00000461798 BSNDQ8WZ55 320 aa10.13□□□□□ -0.79
BRCA1-207ENST00000461798 TMX3Q96JJ7 454 aa10.13□□□□□ -0.79
BRCA1-207ENST00000461798 RPGRIP1Q96KN7 1286 aa10.13□□□□□ -0.79
BRCA1-207ENST00000461798 ZFP42Q96MM3 310 aa10.13□□□□□ -0.79
BRCA1-207ENST00000461798 EMILIN2Q9BXX0 1053 aa10.13□□□□□ -0.79
BRCA1-207ENST00000461798 RAB34Q9BZG1 259 aa10.13□□□□□ -0.79
BRCA1-207ENST00000461798 CCDC113Q9H0I3 377 aa10.13□□□□□ -0.79
BRCA1-207ENST00000461798 RXFP1Q9HBX9 757 aa10.13□□□□□ -0.79
BRCA1-207ENST00000461798 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.13□□□□□ -0.79
BRCA1-207ENST00000461798 MARCH5Q9NX47 278 aa10.13□□□□□ -0.79
BRCA1-207ENST00000461798 KIAA1024Q9UPX6 916 aa10.13□□□□□ -0.79
BRCA1-207ENST00000461798 SSX2IPQ9Y2D8 614 aa10.13□□□□□ -0.79
BRCA1-207ENST00000461798 HCN4Q9Y3Q4 1203 aa10.13□□□□□ -0.79
BRCA1-207ENST00000461798 HES2Q9Y543 173 aa10.13□□□□□ -0.79
BRCA1-207ENST00000461798 PCDHB6Q9Y5E3 794 aa10.13□□□□□ -0.79
BRCA1-207ENST00000461798 N4BP3O15049 544 aa10.12□□□□□ -0.79
BRCA1-207ENST00000461798 NR1I2O75469 434 aa10.12□□□□□ -0.79
BRCA1-207ENST00000461798 PAPLNO95428 1278 aa10.12□□□□□ -0.79
BRCA1-207ENST00000461798 NPTXRO95502 500 aa10.12□□□□□ -0.79
BRCA1-207ENST00000461798 CNPP09543 421 aaKnown RBP10.12□□□□□ -0.79
BRCA1-207ENST00000461798 EPCAMP16422 314 aa10.12□□□□□ -0.79
BRCA1-207ENST00000461798 PLA2G5P39877 138 aa10.12□□□□□ -0.79
BRCA1-207ENST00000461798 MLH1P40692 756 aa10.12□□□□□ -0.79
BRCA1-207ENST00000461798 MTHFRP42898 656 aa10.12□□□□□ -0.79
BRCA1-207ENST00000461798 SCNN1GP51170 649 aa10.12□□□□□ -0.79
BRCA1-207ENST00000461798 EFNA5P52803 228 aa10.12□□□□□ -0.79
BRCA1-207ENST00000461798 ZXDAP98168 799 aa10.12□□□□□ -0.79
BRCA1-207ENST00000461798 NBR1Q14596 966 aa10.12□□□□□ -0.79
BRCA1-207ENST00000461798 IL17AQ16552 155 aa10.12□□□□□ -0.79
BRCA1-207ENST00000461798 MAPK6Q16659 721 aa10.12□□□□□ -0.79
BRCA1-207ENST00000461798 RILPL1Q5EBL4 403 aa10.12□□□□□ -0.79
BRCA1-207ENST00000461798 ATAT1Q5SQI0 421 aa10.12□□□□□ -0.79
BRCA1-207ENST00000461798 KIAA0319Q5VV43 1072 aa10.12□□□□□ -0.79
BRCA1-207ENST00000461798 TRIM67Q6ZTA4 783 aa10.12□□□□□ -0.79
BRCA1-207ENST00000461798 TMEM87AQ8NBN3 555 aa10.12□□□□□ -0.79
BRCA1-207ENST00000461798 KIFAP3Q92845 792 aa10.12□□□□□ -0.79
BRCA1-207ENST00000461798 RIPOR3Q96MK2 946 aa10.12□□□□□ -0.79
BRCA1-207ENST00000461798 RPS6KC1Q96S38 1066 aa10.12□□□□□ -0.79
BRCA1-207ENST00000461798 HERC2P3Q9BVR0 1158 aa10.12□□□□□ -0.79
BRCA1-207ENST00000461798 COLEC11Q9BWP8 271 aa10.12□□□□□ -0.79
BRCA1-207ENST00000461798 TRIM6Q9C030 488 aaPredicted RBP10.12□□□□□ -0.79
BRCA1-207ENST00000461798 KCNH6Q9H252 994 aa10.12□□□□□ -0.79
BRCA1-207ENST00000461798 BHMT2Q9H2M3 363 aa10.12□□□□□ -0.79
BRCA1-207ENST00000461798 NXF3Q9H4D5 531 aaKnown RBP10.12□□□□□ -0.79
BRCA1-207ENST00000461798 MRPL17Q9NRX2 175 aaKnown RBP10.12□□□□□ -0.79
BRCA1-207ENST00000461798 CHST7Q9NS84 486 aa10.12□□□□□ -0.79
BRCA1-207ENST00000461798 AKAP5P24588 427 aa10.11□□□□□ -0.79
BRCA1-207ENST00000461798 OR1G1P47890 313 aa10.11□□□□□ -0.79
BRCA1-207ENST00000461798 CLCN4P51793 760 aa10.11□□□□□ -0.79
BRCA1-207ENST00000461798 DSG1Q02413 1049 aa10.11□□□□□ -0.79
BRCA1-207ENST00000461798 GRIK3Q13003 919 aa10.11□□□□□ -0.79
BRCA1-207ENST00000461798 PRPF4BQ13523 1007 aaKnown RBP10.11□□□□□ -0.79
BRCA1-207ENST00000461798 KIAA1841Q6NSI8 718 aa10.11□□□□□ -0.79
BRCA1-207ENST00000461798 DTHD1Q6ZMT9 781 aa10.11□□□□□ -0.79
BRCA1-207ENST00000461798 TAS1R1Q7RTX1 841 aa10.11□□□□□ -0.79
BRCA1-207ENST00000461798 GPR149Q86SP6 731 aa10.11□□□□□ -0.79
BRCA1-207ENST00000461798 CDR2LQ86X02 465 aaPredicted RBP10.11□□□□□ -0.79
BRCA1-207ENST00000461798 CMASQ8NFW8 434 aaPredicted RBP10.11□□□□□ -0.79
BRCA1-207ENST00000461798 DEPTORQ8TB45 409 aa10.11□□□□□ -0.79
BRCA1-207ENST00000461798 HDAC7Q8WUI4 952 aa10.11□□□□□ -0.79
BRCA1-207ENST00000461798 IFT74Q96LB3 600 aa10.11□□□□□ -0.79
BRCA1-207ENST00000461798 MFSD14AQ96MC6 490 aa10.11□□□□□ -0.79
BRCA1-207ENST00000461798 FBXL18Q96ME1 805 aa10.11□□□□□ -0.79
BRCA1-207ENST00000461798 APOL5Q9BWW9 433 aa10.11□□□□□ -0.79
BRCA1-207ENST00000461798 RHOBTB2Q9BYZ6 727 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms