RNA–Protein interactions for RNA: ENST00000460925.1

SF3A3-202, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-202ENST00000460925 SMIM22K7EJ46 135 aa5.78□□□□□ -1.48
SF3A3-202ENST00000460925 NPHS1O60500 1241 aa5.78□□□□□ -1.48
SF3A3-202ENST00000460925 SRGAP2CP0DJJ0 459 aa5.78□□□□□ -1.48
SF3A3-202ENST00000460925 PYGMP11217 842 aa5.78□□□□□ -1.48
SF3A3-202ENST00000460925 CHMLP26374 656 aa5.78□□□□□ -1.48
SF3A3-202ENST00000460925 ID4P47928 161 aa5.78□□□□□ -1.48
SF3A3-202ENST00000460925 CACNB3P54284 484 aa5.78□□□□□ -1.48
SF3A3-202ENST00000460925 TMPRSS15P98073 1019 aa5.78□□□□□ -1.48
SF3A3-202ENST00000460925 EGR3Q06889 387 aa5.78□□□□□ -1.48
SF3A3-202ENST00000460925 HABP4Q5JVS0 413 aaKnown RBP5.78□□□□□ -1.48
SF3A3-202ENST00000460925 SLC9C2Q5TAH2 1124 aa5.78□□□□□ -1.48
SF3A3-202ENST00000460925 VPS53Q5VIR6 699 aa5.78□□□□□ -1.48
SF3A3-202ENST00000460925 STRIP1Q5VSL9 837 aa5.78□□□□□ -1.48
SF3A3-202ENST00000460925 CREB3L3Q68CJ9 461 aa5.78□□□□□ -1.48
SF3A3-202ENST00000460925 NAA16Q6N069 864 aaPredicted RBP5.78□□□□□ -1.48
SF3A3-202ENST00000460925 CWC27Q6UX04 472 aaKnown RBP5.78□□□□□ -1.48
SF3A3-202ENST00000460925 CPNE8Q86YQ8 564 aa5.78□□□□□ -1.48
SF3A3-202ENST00000460925 FAM43AQ8N2R8 423 aa5.78□□□□□ -1.48
SF3A3-202ENST00000460925 LCORLQ8N3X6 602 aa5.78□□□□□ -1.48
SF3A3-202ENST00000460925 NAT16Q8N8M0 369 aa5.78□□□□□ -1.48
SF3A3-202ENST00000460925 DPF3Q92784 378 aa5.78□□□□□ -1.48
SF3A3-202ENST00000460925 NSUN4Q96CB9 384 aaKnown RBP5.78□□□□□ -1.48
SF3A3-202ENST00000460925 SCYL1Q96KG9 808 aa5.78□□□□□ -1.48
SF3A3-202ENST00000460925 WDR90Q96KV7 1748 aa5.78□□□□□ -1.48
SF3A3-202ENST00000460925 C8orf48Q96LL4 319 aa5.78□□□□□ -1.48
SF3A3-202ENST00000460925 TRIM8Q9BZR9 551 aa5.78□□□□□ -1.48
SF3A3-202ENST00000460925 UBA5Q9GZZ9 404 aa5.78□□□□□ -1.48
SF3A3-202ENST00000460925 ARMT1Q9H993 441 aa5.78□□□□□ -1.48
SF3A3-202ENST00000460925 TNFRSF10DQ9UBN6 386 aa5.78□□□□□ -1.48
SF3A3-202ENST00000460925 STK17AQ9UEE5 414 aa5.78□□□□□ -1.48
SF3A3-202ENST00000460925 ZC3H7BQ9UGR2 993 aaKnown RBP5.78□□□□□ -1.48
SF3A3-202ENST00000460925 FBXL7Q9UJT9 491 aa5.78□□□□□ -1.48
SF3A3-202ENST00000460925 VAV3Q9UKW4 847 aa5.78□□□□□ -1.48
SF3A3-202ENST00000460925 MROH7-TTC4A0A0A0MT08 1334 aa5.77□□□□□ -1.49
SF3A3-202ENST00000460925 PDS5AQ29RF7 1337 aaKnown RBP5.77□□□□□ -1.49
SF3A3-202ENST00000460925 SALL1Q9NSC2 1324 aa5.77□□□□□ -1.49
SF3A3-202ENST00000460925 SCN4AP35499 1836 aa5.77□□□□□ -1.49
SF3A3-202ENST00000460925 E2F8A0AVK6 867 aa5.77□□□□□ -1.49
SF3A3-202ENST00000460925 CLRN2A0PK11 232 aa5.77□□□□□ -1.49
SF3A3-202ENST00000460925 ZNF561-AS1K7EIQ3 104 aa5.77□□□□□ -1.49
SF3A3-202ENST00000460925 FOXP2O15409 715 aa5.77□□□□□ -1.49
SF3A3-202ENST00000460925 RNF113AO15541 343 aaKnown RBP5.77□□□□□ -1.49
SF3A3-202ENST00000460925 PRKAB2O43741 272 aa5.77□□□□□ -1.49
SF3A3-202ENST00000460925 ZNF500O60304 480 aaPredicted RBP5.77□□□□□ -1.49
SF3A3-202ENST00000460925 ULK1O75385 1050 aa5.77□□□□□ -1.49
SF3A3-202ENST00000460925 MBD4O95243 580 aa5.77□□□□□ -1.49
SF3A3-202ENST00000460925 ATP2A2P16615 1042 aaKnown RBP5.77□□□□□ -1.49
SF3A3-202ENST00000460925 RPL10P27635 214 aaKnown RBP5.77□□□□□ -1.49
SF3A3-202ENST00000460925 BCL6P41182 706 aa5.77□□□□□ -1.49
SF3A3-202ENST00000460925 EPS15P42566 896 aa5.77□□□□□ -1.49
SF3A3-202ENST00000460925 BTDP43251 543 aa5.77□□□□□ -1.49
SF3A3-202ENST00000460925 RBM5P52756 815 aaKnown RBP eCLIP5.77□□□□□ -1.49
SF3A3-202ENST00000460925 CORO7P57737 925 aa5.77□□□□□ -1.49
SF3A3-202ENST00000460925 IL2P60568 153 aa5.77□□□□□ -1.49
SF3A3-202ENST00000460925 ITKQ08881 620 aa5.77□□□□□ -1.49
SF3A3-202ENST00000460925 LAPTM5Q13571 262 aa5.77□□□□□ -1.49
SF3A3-202ENST00000460925 PLA2G4EQ3MJ16 856 aa5.77□□□□□ -1.49
SF3A3-202ENST00000460925 LONRF3Q496Y0 759 aa5.77□□□□□ -1.49
SF3A3-202ENST00000460925 TBC1D10BQ4KMP7 808 aaPredicted RBP5.77□□□□□ -1.49
SF3A3-202ENST00000460925 NKAPLQ5M9Q1 402 aa5.77□□□□□ -1.49
SF3A3-202ENST00000460925 ZMYM1Q5SVZ6 1142 aa5.77□□□□□ -1.49
SF3A3-202ENST00000460925 SYDE2Q5VT97 1194 aa5.77□□□□□ -1.49
SF3A3-202ENST00000460925 ZPBP2Q6X784 338 aa5.77□□□□□ -1.49
SF3A3-202ENST00000460925 RAVER1Q8IY67 606 aaKnown RBP5.77□□□□□ -1.49
SF3A3-202ENST00000460925 CNTD1Q8N815 330 aa5.77□□□□□ -1.49
SF3A3-202ENST00000460925 SH3RF3Q8TEJ3 882 aaPredicted RBP5.77□□□□□ -1.49
SF3A3-202ENST00000460925 SDR42E1Q8WUS8 393 aa5.77□□□□□ -1.49
SF3A3-202ENST00000460925 MISP3Q96FF7 219 aa5.77□□□□□ -1.49
SF3A3-202ENST00000460925 HRASLS5Q96KN8 279 aa5.77□□□□□ -1.49
SF3A3-202ENST00000460925 G6PC3Q9BUM1 346 aa5.77□□□□□ -1.49
SF3A3-202ENST00000460925 MAF1Q9H063 256 aa5.77□□□□□ -1.49
SF3A3-202ENST00000460925 YY1AP1Q9H869 796 aa5.77□□□□□ -1.49
SF3A3-202ENST00000460925 EPB41L4AQ9HCS5 686 aaPredicted RBP5.77□□□□□ -1.49
SF3A3-202ENST00000460925 EMC7Q9NPA0 242 aa5.77□□□□□ -1.49
SF3A3-202ENST00000460925 DIAPH3Q9NSV4 1193 aa5.77□□□□□ -1.49
SF3A3-202ENST00000460925 AATFQ9NY61 560 aaKnown RBP eCLIP5.77□□□□□ -1.49
SF3A3-202ENST00000460925 LMCD1Q9NZU5 365 aa5.77□□□□□ -1.49
SF3A3-202ENST00000460925 PPARGC1AQ9UBK2 798 aaKnown RBP5.77□□□□□ -1.49
SF3A3-202ENST00000460925 PNMA2Q9UL42 364 aa5.77□□□□□ -1.49
SF3A3-202ENST00000460925 CBLCQ9ULV8 474 aa5.77□□□□□ -1.49
SF3A3-202ENST00000460925 X6R8D5 127 aa5.77□□□□□ -1.49
SF3A3-202ENST00000460925 A0A1W2PQ45 241 aaPredicted RBP5.76□□□□□ -1.49
SF3A3-202ENST00000460925 A0A1W2PQY0 241 aa5.76□□□□□ -1.49
SF3A3-202ENST00000460925 PTPDC1A2A3K4 754 aa5.76□□□□□ -1.49
SF3A3-202ENST00000460925 FADS2P1A8MWK0 482 aa5.76□□□□□ -1.49
SF3A3-202ENST00000460925 GABRDO14764 452 aa5.76□□□□□ -1.49
SF3A3-202ENST00000460925 GPAA1O43292 621 aa5.76□□□□□ -1.49
SF3A3-202ENST00000460925 TSPAN6O43657 245 aa5.76□□□□□ -1.49
SF3A3-202ENST00000460925 DNM2P50570 870 aa5.76□□□□□ -1.49
SF3A3-202ENST00000460925 PTH1RQ03431 593 aa5.76□□□□□ -1.49
SF3A3-202ENST00000460925 MAP3K12Q12852 859 aa5.76□□□□□ -1.49
SF3A3-202ENST00000460925 CRY1Q16526 586 aa5.76□□□□□ -1.49
SF3A3-202ENST00000460925 ATP13A4Q4VNC1 1196 aa5.76□□□□□ -1.49
SF3A3-202ENST00000460925 UTP14CQ5TAP6 766 aaKnown RBP5.76□□□□□ -1.49
SF3A3-202ENST00000460925 HHIPL2Q6UWX4 724 aa5.76□□□□□ -1.49
SF3A3-202ENST00000460925 DLK2Q6UY11 383 aa5.76□□□□□ -1.49
SF3A3-202ENST00000460925 SLCO6A1Q86UG4 719 aa5.76□□□□□ -1.49
SF3A3-202ENST00000460925 RIOX2Q8IUF8 465 aa5.76□□□□□ -1.49
SF3A3-202ENST00000460925 STK11IPQ8N1F8 1099 aa5.76□□□□□ -1.49
SF3A3-202ENST00000460925 ZGPATQ8N5A5 531 aaKnown RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms