RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 TBCBQ99426 244 aa3.65□□□□□ -1.83
HPS3-203ENST00000460822 CGRRF1Q99675 332 aa3.65□□□□□ -1.83
HPS3-203ENST00000460822 GPR20Q99678 358 aa3.65□□□□□ -1.83
HPS3-203ENST00000460822 PDGFDQ9GZP0 370 aaPredicted RBP3.65□□□□□ -1.83
HPS3-203ENST00000460822 TERF2IPQ9NYB0 399 aa3.65□□□□□ -1.83
HPS3-203ENST00000460822 BTBD7Q9P203 1132 aa3.65□□□□□ -1.83
HPS3-203ENST00000460822 PRSS50Q9UI38 385 aa3.65□□□□□ -1.83
HPS3-203ENST00000460822 L1RE1Q9UN81 338 aa3.65□□□□□ -1.83
HPS3-203ENST00000460822 GOLIM4O00461 696 aa3.64□□□□□ -1.83
HPS3-203ENST00000460822 IL13P35225 146 aa3.64□□□□□ -1.83
HPS3-203ENST00000460822 HALP42357 657 aa3.64□□□□□ -1.83
HPS3-203ENST00000460822 CACNB3P54284 484 aa3.64□□□□□ -1.83
HPS3-203ENST00000460822 ROM1Q03395 351 aa3.64□□□□□ -1.83
HPS3-203ENST00000460822 PPARAQ07869 468 aa3.64□□□□□ -1.83
HPS3-203ENST00000460822 IFIT5Q13325 482 aaKnown RBP3.64□□□□□ -1.83
HPS3-203ENST00000460822 CNN3Q15417 329 aaKnown RBP3.64□□□□□ -1.83
HPS3-203ENST00000460822 ANO4Q32M45 955 aa3.64□□□□□ -1.83
HPS3-203ENST00000460822 RNF220Q5VTB9 566 aa3.64□□□□□ -1.83
HPS3-203ENST00000460822 TRMT10BQ6PF06 316 aaKnown RBP3.64□□□□□ -1.83
HPS3-203ENST00000460822 SLC41A1Q8IVJ1 513 aa3.64□□□□□ -1.83
HPS3-203ENST00000460822 PGBD4Q96DM1 585 aa3.64□□□□□ -1.83
HPS3-203ENST00000460822 FOXB1Q99853 325 aa3.64□□□□□ -1.83
HPS3-203ENST00000460822 TMPRSS5Q9H3S3 457 aa3.64□□□□□ -1.83
HPS3-203ENST00000460822 MTG2Q9H4K7 406 aa3.64□□□□□ -1.83
HPS3-203ENST00000460822 DMRT3Q9NQL9 472 aa3.64□□□□□ -1.83
HPS3-203ENST00000460822 LUZP4Q9P127 313 aa3.64□□□□□ -1.83
HPS3-203ENST00000460822 USP18Q9UMW8 372 aa3.64□□□□□ -1.83
HPS3-203ENST00000460822 IPPQ9Y573 584 aa3.64□□□□□ -1.83
HPS3-203ENST00000460822 DUSP10Q9Y6W6 482 aa3.64□□□□□ -1.83
HPS3-203ENST00000460822 CAPN8A6NHC0 703 aa3.63□□□□□ -1.83
HPS3-203ENST00000460822 C9orf118A6NHY6 69 aa3.63□□□□□ -1.83
HPS3-203ENST00000460822 LRG1P02750 347 aa3.63□□□□□ -1.83
HPS3-203ENST00000460822 CENPBP07199 599 aaPredicted RBP3.63□□□□□ -1.83
HPS3-203ENST00000460822 FAHP16930 419 aa3.63□□□□□ -1.83
HPS3-203ENST00000460822 PPM1FP49593 454 aaPredicted RBP3.63□□□□□ -1.83
HPS3-203ENST00000460822 PRIM2P49643 509 aa3.63□□□□□ -1.83
HPS3-203ENST00000460822 AGFG1P52594 562 aaKnown RBP3.63□□□□□ -1.83
HPS3-203ENST00000460822 POU5F1BQ06416 359 aa3.63□□□□□ -1.83
HPS3-203ENST00000460822 DBPQ10586 325 aaPredicted RBP3.63□□□□□ -1.83
HPS3-203ENST00000460822 ADAM9Q13443 819 aa3.63□□□□□ -1.83
HPS3-203ENST00000460822 TRIM14Q14142 442 aa3.63□□□□□ -1.83
HPS3-203ENST00000460822 ADRM1Q16186 407 aa3.63□□□□□ -1.83
HPS3-203ENST00000460822 GLB1LQ6UWU2 654 aa3.63□□□□□ -1.83
HPS3-203ENST00000460822 LMBR1LQ6UX01 489 aa3.63□□□□□ -1.83
HPS3-203ENST00000460822 KANSL1Q7Z3B3 1105 aa3.63□□□□□ -1.83
HPS3-203ENST00000460822 DAAM2Q86T65 1068 aa3.63□□□□□ -1.83
HPS3-203ENST00000460822 CPXCR1Q8N123 301 aa3.63□□□□□ -1.83
HPS3-203ENST00000460822 CHST13Q8NET6 341 aa3.63□□□□□ -1.83
HPS3-203ENST00000460822 TTLL11Q8NHH1 800 aa3.63□□□□□ -1.83
HPS3-203ENST00000460822 NRG4Q8WWG1 115 aa3.63□□□□□ -1.83
HPS3-203ENST00000460822 LOXL4Q96JB6 756 aa3.63□□□□□ -1.83
HPS3-203ENST00000460822 NAP1L4Q99733 375 aaKnown RBP3.63□□□□□ -1.83
HPS3-203ENST00000460822 HERPUD2Q9BSE4 406 aa3.63□□□□□ -1.83
HPS3-203ENST00000460822 BARX1Q9HBU1 254 aaPredicted RBP3.63□□□□□ -1.83
HPS3-203ENST00000460822 BCCIPQ9P287 314 aaKnown RBP eCLIP3.63□□□□□ -1.83
HPS3-203ENST00000460822 ARHGAP28Q9P2N2 729 aa3.63□□□□□ -1.83
HPS3-203ENST00000460822 EVLQ9UI08 416 aaPredicted RBP3.63□□□□□ -1.83
HPS3-203ENST00000460822 CDY2AQ9Y6F7 541 aa3.63□□□□□ -1.83
HPS3-203ENST00000460822 MORC2Q9Y6X9 1032 aaPredicted RBP3.63□□□□□ -1.83
HPS3-203ENST00000460822 MYPNQ86TC9 1320 aa3.63□□□□□ -1.83
HPS3-203ENST00000460822 RASA4BC9J798 803 aa3.63□□□□□ -1.83
HPS3-203ENST00000460822 RASA4O43374 803 aa3.63□□□□□ -1.83
HPS3-203ENST00000460822 PLATP00750 562 aa3.63□□□□□ -1.83
HPS3-203ENST00000460822 ZNF28P17035 718 aa3.63□□□□□ -1.83
HPS3-203ENST00000460822 NOLC1Q14978 699 aaKnown RBP eCLIP3.63□□□□□ -1.83
HPS3-203ENST00000460822 KRT72Q14CN4 511 aa3.63□□□□□ -1.83
HPS3-203ENST00000460822 PRR31Q5SQ13 230 aa3.63□□□□□ -1.83
HPS3-203ENST00000460822 CD276Q5ZPR3 534 aa3.63□□□□□ -1.83
HPS3-203ENST00000460822 MYLK4Q86YV6 388 aaPredicted RBP3.63□□□□□ -1.83
HPS3-203ENST00000460822 OR2C3Q8N628 320 aa3.63□□□□□ -1.83
HPS3-203ENST00000460822 PAF1Q8N7H5 531 aa3.63□□□□□ -1.83
HPS3-203ENST00000460822 LRTOMTQ8WZ04 291 aa3.63□□□□□ -1.83
HPS3-203ENST00000460822 DPF2Q92785 391 aa3.63□□□□□ -1.83
HPS3-203ENST00000460822 SCLT1Q96NL6 688 aa3.63□□□□□ -1.83
HPS3-203ENST00000460822 CRB3Q9BUF7 120 aa3.63□□□□□ -1.83
HPS3-203ENST00000460822 JADE2Q9NQC1 790 aa3.63□□□□□ -1.83
HPS3-203ENST00000460822 DLL4Q9NR61 685 aa3.63□□□□□ -1.83
HPS3-203ENST00000460822 STXBP5LQ9Y2K9 1186 aa3.63□□□□□ -1.83
HPS3-203ENST00000460822 ZDHHC9Q9Y397 364 aa3.63□□□□□ -1.83
HPS3-203ENST00000460822 NR2E3Q9Y5X4 410 aa3.63□□□□□ -1.83
HPS3-203ENST00000460822 CFAP69A5D8W1 941 aa3.62□□□□□ -1.83
HPS3-203ENST00000460822 KPNA5O15131 536 aa3.62□□□□□ -1.83
HPS3-203ENST00000460822 MPIG6BO95866 241 aa3.62□□□□□ -1.83
HPS3-203ENST00000460822 ITGB3P05106 788 aa3.62□□□□□ -1.83
HPS3-203ENST00000460822 ENO2P09104 434 aaPredicted RBP3.62□□□□□ -1.83
HPS3-203ENST00000460822 PTGS1P23219 599 aa3.62□□□□□ -1.83
HPS3-203ENST00000460822 PIK3CBP42338 1070 aa3.62□□□□□ -1.83
HPS3-203ENST00000460822 IL10RAQ13651 578 aa3.62□□□□□ -1.83
HPS3-203ENST00000460822 TUBB8Q3ZCM7 444 aa3.62□□□□□ -1.83
HPS3-203ENST00000460822 CCDC157Q569K6 752 aa3.62□□□□□ -1.83
HPS3-203ENST00000460822 KLHDC10Q6PID8 442 aa3.62□□□□□ -1.83
HPS3-203ENST00000460822 MIGA2Q7L4E1 593 aa3.62□□□□□ -1.83
HPS3-203ENST00000460822 MAEAQ7L5Y9 396 aa3.62□□□□□ -1.83
HPS3-203ENST00000460822 KRT78Q8N1N4 520 aa3.62□□□□□ -1.83
HPS3-203ENST00000460822 GLB1L3Q8NCI6 653 aaPredicted RBP3.62□□□□□ -1.83
HPS3-203ENST00000460822 DEPTORQ8TB45 409 aa3.62□□□□□ -1.83
HPS3-203ENST00000460822 KLHDC4Q8TBB5 520 aa3.62□□□□□ -1.83
HPS3-203ENST00000460822 GAB3Q8WWW8 586 aa3.62□□□□□ -1.83
HPS3-203ENST00000460822 RPGRQ92834 1020 aaKnown RBP3.62□□□□□ -1.83
HPS3-203ENST00000460822 KAT5Q92993 513 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms