RNA–Protein interactions for RNA: ENST00000460639.2

ATRX-204, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 461 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-204ENST00000460639 STPG3Q8N7X2 389 aa5.44□□□□□ -1.54
ATRX-204ENST00000460639 DTX3Q8N9I9 347 aa5.44□□□□□ -1.54
ATRX-204ENST00000460639 SPATA5Q8NB90 893 aa5.44□□□□□ -1.54
ATRX-204ENST00000460639 RTF1Q92541 710 aaKnown RBP5.44□□□□□ -1.54
ATRX-204ENST00000460639 UBXN10Q96LJ8 280 aa5.44□□□□□ -1.54
ATRX-204ENST00000460639 KRTAP4-7Q9BYR0 210 aa5.44□□□□□ -1.54
ATRX-204ENST00000460639 PDGFDQ9GZP0 370 aaPredicted RBP5.44□□□□□ -1.54
ATRX-204ENST00000460639 RETREG1Q9H6L5 497 aa5.44□□□□□ -1.54
ATRX-204ENST00000460639 ITM2CQ9NQX7 267 aa5.44□□□□□ -1.54
ATRX-204ENST00000460639 RASSF1Q9NS23 344 aa5.44□□□□□ -1.54
ATRX-204ENST00000460639 SPATA6Q9NWH7 488 aaPredicted RBP5.44□□□□□ -1.54
ATRX-204ENST00000460639 ZFP69BQ9UJL9 534 aa5.44□□□□□ -1.54
ATRX-204ENST00000460639 TUBD1Q9UJT1 453 aa5.44□□□□□ -1.54
ATRX-204ENST00000460639 A0A087WV62 115 aa5.43□□□□□ -1.54
ATRX-204ENST00000460639 KLHL33A6NCF5 533 aa5.43□□□□□ -1.54
ATRX-204ENST00000460639 RFXAPO00287 272 aa5.43□□□□□ -1.54
ATRX-204ENST00000460639 OFD1O75665 1012 aa5.43□□□□□ -1.54
ATRX-204ENST00000460639 MPIG6BO95866 241 aa5.43□□□□□ -1.54
ATRX-204ENST00000460639 IFIT1P09914 478 aaKnown RBP5.43□□□□□ -1.54
ATRX-204ENST00000460639 VCAM1P19320 739 aa5.43□□□□□ -1.54
ATRX-204ENST00000460639 PTGS1P23219 599 aa5.43□□□□□ -1.54
ATRX-204ENST00000460639 GALNT1Q10472 559 aaPredicted RBP5.43□□□□□ -1.54
ATRX-204ENST00000460639 FAPQ12884 760 aa5.43□□□□□ -1.54
ATRX-204ENST00000460639 PPFIA1Q13136 1202 aa5.43□□□□□ -1.54
ATRX-204ENST00000460639 ZNF385BQ569K4 471 aa5.43□□□□□ -1.54
ATRX-204ENST00000460639 RSRC2Q7L4I2 434 aaKnown RBP5.43□□□□□ -1.54
ATRX-204ENST00000460639 CILP2Q8IUL8 1156 aa5.43□□□□□ -1.54
ATRX-204ENST00000460639 EFHBQ8N7U6 833 aa5.43□□□□□ -1.54
ATRX-204ENST00000460639 KYQ8NBH2 561 aa5.43□□□□□ -1.54
ATRX-204ENST00000460639 ADAMTS18Q8TE60 1221 aa5.43□□□□□ -1.54
ATRX-204ENST00000460639 CLIC6Q96NY7 704 aa5.43□□□□□ -1.54
ATRX-204ENST00000460639 AMNQ9BXJ7 453 aa5.43□□□□□ -1.54
ATRX-204ENST00000460639 DMRT3Q9NQL9 472 aa5.43□□□□□ -1.54
ATRX-204ENST00000460639 ACSS2Q9NR19 701 aa5.43□□□□□ -1.54
ATRX-204ENST00000460639 DLL4Q9NR61 685 aa5.43□□□□□ -1.54
ATRX-204ENST00000460639 ZNF277Q9NRM2 450 aaPredicted RBP5.43□□□□□ -1.54
ATRX-204ENST00000460639 CCM2LQ9NUG4 571 aaPredicted RBP5.43□□□□□ -1.54
ATRX-204ENST00000460639 RTEL1Q9NZ71 1219 aa5.43□□□□□ -1.54
ATRX-204ENST00000460639 ARHGAP20Q9P2F6 1191 aa5.43□□□□□ -1.54
ATRX-204ENST00000460639 CRYL1Q9Y2S2 319 aa5.43□□□□□ -1.54
ATRX-204ENST00000460639 SPO11Q9Y5K1 396 aa5.43□□□□□ -1.54
ATRX-204ENST00000460639 FFAR3O14843 346 aa5.42□□□□□ -1.54
ATRX-204ENST00000460639 XPOTO43592 962 aaKnown RBP5.42□□□□□ -1.54
ATRX-204ENST00000460639 GFPT2O94808 682 aa5.42□□□□□ -1.54
ATRX-204ENST00000460639 MBD4O95243 580 aa5.42□□□□□ -1.54
ATRX-204ENST00000460639 IL18BPO95998 194 aa5.42□□□□□ -1.54
ATRX-204ENST00000460639 SDHAP31040 664 aa5.42□□□□□ -1.54
ATRX-204ENST00000460639 ADD2P35612 726 aa5.42□□□□□ -1.54
ATRX-204ENST00000460639 TSPAN7P41732 249 aa5.42□□□□□ -1.54
ATRX-204ENST00000460639 TUBP50607 506 aa5.42□□□□□ -1.54
ATRX-204ENST00000460639 AFF3P51826 1226 aaKnown RBP5.42□□□□□ -1.54
ATRX-204ENST00000460639 HERVK_113P62684 666 aa5.42□□□□□ -1.54
ATRX-204ENST00000460639 NUCB1Q02818 461 aa5.42□□□□□ -1.54
ATRX-204ENST00000460639 DDB1Q16531 1140 aa5.42□□□□□ -1.54
ATRX-204ENST00000460639 KIAA0753Q2KHM9 967 aa5.42□□□□□ -1.54
ATRX-204ENST00000460639 VWA3BQ502W6 1294 aa5.42□□□□□ -1.54
ATRX-204ENST00000460639 SPECC1Q5M775 1068 aa5.42□□□□□ -1.54
ATRX-204ENST00000460639 VPS53Q5VIR6 699 aa5.42□□□□□ -1.54
ATRX-204ENST00000460639 AGAP9Q5VTM2 703 aa5.42□□□□□ -1.54
ATRX-204ENST00000460639 RTN4RL1Q86UN2 441 aaPredicted RBP5.42□□□□□ -1.54
ATRX-204ENST00000460639 C11orf74Q86VG3 221 aa5.42□□□□□ -1.54
ATRX-204ENST00000460639 MYLK4Q86YV6 388 aaPredicted RBP5.42□□□□□ -1.54
ATRX-204ENST00000460639 LINC00482Q8N8I6 264 aa5.42□□□□□ -1.54
ATRX-204ENST00000460639 OR10H5Q8NGA6 315 aa5.42□□□□□ -1.54
ATRX-204ENST00000460639 IGDCC4Q8TDY8 1250 aa5.42□□□□□ -1.54
ATRX-204ENST00000460639 CCT6BQ92526 530 aa5.42□□□□□ -1.54
ATRX-204ENST00000460639 RPGRQ92834 1020 aaKnown RBP5.42□□□□□ -1.54
ATRX-204ENST00000460639 DACT3Q96B18 629 aaPredicted RBP5.42□□□□□ -1.54
ATRX-204ENST00000460639 RSRC1Q96IZ7 334 aaKnown RBP5.42□□□□□ -1.54
ATRX-204ENST00000460639 TMEM209Q96SK2 561 aa5.42□□□□□ -1.54
ATRX-204ENST00000460639 TTLL2Q9BWV7 592 aa5.42□□□□□ -1.54
ATRX-204ENST00000460639 B3GNT5Q9BYG0 378 aa5.42□□□□□ -1.54
ATRX-204ENST00000460639 MYLK2Q9H1R3 596 aa5.42□□□□□ -1.54
ATRX-204ENST00000460639 SEMA4AQ9H3S1 761 aa5.42□□□□□ -1.54
ATRX-204ENST00000460639 PRKRIP1Q9H875 184 aaPredicted RBP5.42□□□□□ -1.54
ATRX-204ENST00000460639 ZMAT4Q9H898 229 aa5.42□□□□□ -1.54
ATRX-204ENST00000460639 INCENPQ9NQS7 918 aa5.42□□□□□ -1.54
ATRX-204ENST00000460639 HSPBP1Q9NZL4 362 aa5.42□□□□□ -1.54
ATRX-204ENST00000460639 FBXO10Q9UK96 956 aa5.42□□□□□ -1.54
ATRX-204ENST00000460639 USP19O94966 1318 aa5.42□□□□□ -1.54
ATRX-204ENST00000460639 GOLGA6L22H0YM25 854 aa5.41□□□□□ -1.54
ATRX-204ENST00000460639 H3BML4 177 aa5.41□□□□□ -1.54
ATRX-204ENST00000460639 K7ENM7 598 aa5.41□□□□□ -1.54
ATRX-204ENST00000460639 DDX3XO00571 662 aaKnown RBP eCLIP5.41□□□□□ -1.54
ATRX-204ENST00000460639 B3GALT2O43825 422 aa5.41□□□□□ -1.54
ATRX-204ENST00000460639 UBXN7O94888 489 aa5.41□□□□□ -1.54
ATRX-204ENST00000460639 APOL3O95236 402 aa5.41□□□□□ -1.54
ATRX-204ENST00000460639 RPN1P04843 607 aaKnown RBP5.41□□□□□ -1.54
ATRX-204ENST00000460639 ALDH2P05091 517 aa5.41□□□□□ -1.54
ATRX-204ENST00000460639 ADCY8P40145 1251 aa5.41□□□□□ -1.54
ATRX-204ENST00000460639 RAD52P43351 418 aa5.41□□□□□ -1.54
ATRX-204ENST00000460639 AGFG1P52594 562 aaKnown RBP5.41□□□□□ -1.54
ATRX-204ENST00000460639 MLLT6P55198 1093 aaPredicted RBP5.41□□□□□ -1.54
ATRX-204ENST00000460639 SMAD3P84022 425 aaKnown RBP5.41□□□□□ -1.54
ATRX-204ENST00000460639 TNFAIP2Q03169 654 aa5.41□□□□□ -1.54
ATRX-204ENST00000460639 DLX2Q07687 328 aaPredicted RBP5.41□□□□□ -1.54
ATRX-204ENST00000460639 SMAD2Q15796 467 aaKnown RBP5.41□□□□□ -1.54
ATRX-204ENST00000460639 SLC10A5Q5PT55 438 aa5.41□□□□□ -1.54
ATRX-204ENST00000460639 TRMT10BQ6PF06 316 aaKnown RBP5.41□□□□□ -1.54
ATRX-204ENST00000460639 NPNTQ6UXI9 565 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms