RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 RTN2O75298 545 aa16.55■□□□□ 0.24
LMNB1-203ENST00000460265 OSTNP61366 133 aa16.55■□□□□ 0.24
LMNB1-203ENST00000460265 SNRNP35Q16560 246 aaKnown RBP16.55■□□□□ 0.24
LMNB1-203ENST00000460265 ASTE1Q2TB18 679 aaPredicted RBP16.55■□□□□ 0.24
LMNB1-203ENST00000460265 NSUN6Q8TEA1 469 aaKnown RBP16.55■□□□□ 0.24
LMNB1-203ENST00000460265 CAMKK2Q96RR4 588 aa16.55■□□□□ 0.24
LMNB1-203ENST00000460265 IWS1Q96ST2 819 aa16.55■□□□□ 0.24
LMNB1-203ENST00000460265 PPP1R16BQ96T49 567 aa16.55■□□□□ 0.24
LMNB1-203ENST00000460265 ATP8A1Q9Y2Q0 1164 aa16.55■□□□□ 0.24
LMNB1-203ENST00000460265 PLTPP55058 493 aa16.55■□□□□ 0.24
LMNB1-203ENST00000460265 MEI1Q5TIA1 1274 aa16.55■□□□□ 0.24
LMNB1-203ENST00000460265 PASD1Q8IV76 773 aa16.55■□□□□ 0.24
LMNB1-203ENST00000460265 PARD3BQ8TEW8 1205 aa16.55■□□□□ 0.24
LMNB1-203ENST00000460265 CRYGNQ8WXF5 182 aa16.55■□□□□ 0.24
LMNB1-203ENST00000460265 GGA3Q9NZ52 723 aa16.55■□□□□ 0.24
LMNB1-203ENST00000460265 TTI1O43156 1089 aa16.54■□□□□ 0.24
LMNB1-203ENST00000460265 CTNND1O60716 968 aaKnown RBP16.54■□□□□ 0.24
LMNB1-203ENST00000460265 GRIK3Q13003 919 aa16.54■□□□□ 0.24
LMNB1-203ENST00000460265 SNX1Q13596 522 aa16.54■□□□□ 0.24
LMNB1-203ENST00000460265 TTMPQ5BVD1 217 aa16.54■□□□□ 0.24
LMNB1-203ENST00000460265 EPM2AIP1Q7L775 607 aaPredicted RBP16.54■□□□□ 0.24
LMNB1-203ENST00000460265 YTHDF3Q7Z739 585 aaKnown RBP16.54■□□□□ 0.24
LMNB1-203ENST00000460265 PALB2Q86YC2 1186 aa16.54■□□□□ 0.24
LMNB1-203ENST00000460265 MAGOHBQ96A72 148 aaKnown RBP16.54■□□□□ 0.24
LMNB1-203ENST00000460265 AGPAT1Q99943 283 aa16.54■□□□□ 0.24
LMNB1-203ENST00000460265 ATP6V0A4Q9HBG4 840 aa16.54■□□□□ 0.24
LMNB1-203ENST00000460265 RNF14Q9UBS8 474 aa16.54■□□□□ 0.24
LMNB1-203ENST00000460265 ATRNL1Q5VV63 1379 aa16.54■□□□□ 0.24
LMNB1-203ENST00000460265 PPP1R37O75864 691 aa16.54■□□□□ 0.24
LMNB1-203ENST00000460265 SKOR1P84550 965 aa16.54■□□□□ 0.24
LMNB1-203ENST00000460265 KRT76Q01546 638 aa16.54■□□□□ 0.24
LMNB1-203ENST00000460265 ZNF394Q53GI3 561 aa16.54■□□□□ 0.24
LMNB1-203ENST00000460265 ZBTB33Q86T24 672 aa16.54■□□□□ 0.24
LMNB1-203ENST00000460265 ARHGEF19Q8IW93 802 aa16.54■□□□□ 0.24
LMNB1-203ENST00000460265 UBL4BQ8N7F7 174 aa16.54■□□□□ 0.24
LMNB1-203ENST00000460265 USP38Q8NB14 1042 aa16.54■□□□□ 0.24
LMNB1-203ENST00000460265 DHX38Q92620 1227 aaKnown RBP16.54■□□□□ 0.24
LMNB1-203ENST00000460265 PBKQ96KB5 322 aa16.54■□□□□ 0.24
LMNB1-203ENST00000460265 ACTR5Q9H9F9 607 aaPredicted RBP16.54■□□□□ 0.24
LMNB1-203ENST00000460265 GINS2Q9Y248 185 aa16.54■□□□□ 0.24
LMNB1-203ENST00000460265 CNTNAP1P78357 1384 aa16.54■□□□□ 0.24
LMNB1-203ENST00000460265 FRMPD4Q14CM0 1322 aa16.54■□□□□ 0.24
LMNB1-203ENST00000460265 ATXN2Q99700 1313 aaKnown RBP16.54■□□□□ 0.24
LMNB1-203ENST00000460265 SRGAP2CP0DJJ0 459 aa16.54■□□□□ 0.24
LMNB1-203ENST00000460265 PDE6CP51160 858 aa16.54■□□□□ 0.24
LMNB1-203ENST00000460265 RWDD2BP57060 319 aa16.54■□□□□ 0.24
LMNB1-203ENST00000460265 MYO1EQ12965 1108 aa16.54■□□□□ 0.24
LMNB1-203ENST00000460265 PLCB4Q15147 1175 aa16.54■□□□□ 0.24
LMNB1-203ENST00000460265 SEL1L2Q5TEA6 688 aa16.54■□□□□ 0.24
LMNB1-203ENST00000460265 TRIM51Q9BSJ1 452 aa16.54■□□□□ 0.24
LMNB1-203ENST00000460265 CAND2O75155 1236 aa16.53■□□□□ 0.24
LMNB1-203ENST00000460265 SGPL1O95470 568 aa16.53■□□□□ 0.24
LMNB1-203ENST00000460265 MFAP3P55082 362 aa16.53■□□□□ 0.24
LMNB1-203ENST00000460265 PPP1R7Q15435 360 aa16.53■□□□□ 0.24
LMNB1-203ENST00000460265 TSEN2Q8NCE0 465 aaKnown RBP16.53■□□□□ 0.24
LMNB1-203ENST00000460265 GMLQ99445 158 aa16.53■□□□□ 0.24
LMNB1-203ENST00000460265 ZNF408Q9H9D4 720 aa16.53■□□□□ 0.24
LMNB1-203ENST00000460265 SLC38A10Q9HBR0 1119 aa16.53■□□□□ 0.24
LMNB1-203ENST00000460265 SNX24Q9Y343 169 aa16.53■□□□□ 0.24
LMNB1-203ENST00000460265 TAF1LQ8IZX4 1826 aa16.53■□□□□ 0.24
LMNB1-203ENST00000460265 VWA5AO00534 786 aa16.53■□□□□ 0.24
LMNB1-203ENST00000460265 NPTX2P47972 431 aa16.53■□□□□ 0.24
LMNB1-203ENST00000460265 BACE1P56817 501 aa16.53■□□□□ 0.24
LMNB1-203ENST00000460265 INHBEP58166 350 aa16.53■□□□□ 0.24
LMNB1-203ENST00000460265 COL24A1Q17RW2 1714 aa16.53■□□□□ 0.24
LMNB1-203ENST00000460265 EMBQ6PCB8 327 aa16.53■□□□□ 0.24
LMNB1-203ENST00000460265 DAW1Q8N136 415 aa16.53■□□□□ 0.24
LMNB1-203ENST00000460265 MYCBPAPQ8TBZ2 947 aa16.53■□□□□ 0.24
LMNB1-203ENST00000460265 KIFAP3Q92845 792 aa16.53■□□□□ 0.24
LMNB1-203ENST00000460265 ARHGEF26Q96DR7 871 aa16.53■□□□□ 0.24
LMNB1-203ENST00000460265 PXMP2Q9NR77 195 aa16.53■□□□□ 0.24
LMNB1-203ENST00000460265 MAST2Q6P0Q8 1798 aa16.53■□□□□ 0.24
LMNB1-203ENST00000460265 ANKRD63C9JTQ0 380 aa16.53■□□□□ 0.24
LMNB1-203ENST00000460265 PSAPP07602 524 aa16.53■□□□□ 0.24
LMNB1-203ENST00000460265 PRLRP16471 622 aa16.53■□□□□ 0.24
LMNB1-203ENST00000460265 JAK3P52333 1124 aa16.53■□□□□ 0.24
LMNB1-203ENST00000460265 MARSP56192 900 aaKnown RBP16.53■□□□□ 0.24
LMNB1-203ENST00000460265 DHX9Q08211 1270 aaKnown RBP16.53■□□□□ 0.24
LMNB1-203ENST00000460265 KRT71Q3SY84 523 aa16.53■□□□□ 0.24
LMNB1-203ENST00000460265 AADACL2Q6P093 401 aa16.53■□□□□ 0.24
LMNB1-203ENST00000460265 NEK9Q8TD19 979 aa16.53■□□□□ 0.24
LMNB1-203ENST00000460265 CASKIN2Q8WXE0 1202 aa16.53■□□□□ 0.24
LMNB1-203ENST00000460265 RFFLQ8WZ73 363 aa16.53■□□□□ 0.24
LMNB1-203ENST00000460265 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.53■□□□□ 0.247e-7■■□□□ 14.3
LMNB1-203ENST00000460265 JPH1Q9HDC5 661 aaPredicted RBP16.53■□□□□ 0.24
LMNB1-203ENST00000460265 K7ERI5 159 aa16.52■□□□□ 0.24
LMNB1-203ENST00000460265 NOP56O00567 594 aaKnown RBP16.52■□□□□ 0.24
LMNB1-203ENST00000460265 NR1D1P20393 614 aa16.52■□□□□ 0.24
LMNB1-203ENST00000460265 PTGER2P43116 358 aa16.52■□□□□ 0.24
LMNB1-203ENST00000460265 ALS2CLQ60I27 953 aa16.52■□□□□ 0.24
LMNB1-203ENST00000460265 ZNF662Q6ZS27 426 aa16.52■□□□□ 0.24
LMNB1-203ENST00000460265 SPDYE1Q8NFV5 336 aaPredicted RBP16.52■□□□□ 0.24
LMNB1-203ENST00000460265 ZIM3Q96PE6 472 aa16.52■□□□□ 0.24
LMNB1-203ENST00000460265 MKNK1Q9BUB5 465 aa16.52■□□□□ 0.24
LMNB1-203ENST00000460265 C1orf112Q9NSG2 853 aa16.52■□□□□ 0.24
LMNB1-203ENST00000460265 PTGISQ16647 500 aa16.52■□□□□ 0.23
LMNB1-203ENST00000460265 PCNX4Q63HM2 1172 aa16.52■□□□□ 0.23
LMNB1-203ENST00000460265 CAPRIN2Q6IMN6 1127 aaKnown RBP16.52■□□□□ 0.23
LMNB1-203ENST00000460265 LNX1Q8TBB1 728 aaPredicted RBP16.52■□□□□ 0.23
LMNB1-203ENST00000460265 AENQ8WTP8 325 aaKnown RBP16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms