RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 FKBP1CQ5VVH2 108 aa19.52■□□□□ 0.72
HPS3-202ENST00000460120 MICALL1Q8N3F8 863 aa19.52■□□□□ 0.72
HPS3-202ENST00000460120 CAMKK2Q96RR4 588 aa19.52■□□□□ 0.72
HPS3-202ENST00000460120 KIAA1683Q9H0B3 1180 aa19.52■□□□□ 0.72
HPS3-202ENST00000460120 NOCTQ9UK39 431 aaKnown RBP19.52■□□□□ 0.72
HPS3-202ENST00000460120 TRPC6Q9Y210 931 aa19.52■□□□□ 0.72
HPS3-202ENST00000460120 HMGB1P1B2RPK0 211 aaPredicted RBP19.52■□□□□ 0.71
HPS3-202ENST00000460120 VWA5AO00534 786 aa19.52■□□□□ 0.71
HPS3-202ENST00000460120 HMGCS2P54868 508 aa19.52■□□□□ 0.71
HPS3-202ENST00000460120 NCKAP1LP55160 1127 aa19.52■□□□□ 0.71
HPS3-202ENST00000460120 FMO1Q01740 532 aa19.52■□□□□ 0.71
HPS3-202ENST00000460120 POU5F1Q01860 360 aaKnown RBP19.52■□□□□ 0.71
HPS3-202ENST00000460120 TTC27Q6P3X3 843 aa19.52■□□□□ 0.71
HPS3-202ENST00000460120 SLC39A4Q6P5W5 647 aa19.52■□□□□ 0.71
HPS3-202ENST00000460120 C4orf19Q8IY42 314 aa19.52■□□□□ 0.71
HPS3-202ENST00000460120 ZNF564Q8TBZ8 553 aaPredicted RBP19.52■□□□□ 0.71
HPS3-202ENST00000460120 LPAR1Q92633 364 aa19.52■□□□□ 0.71
HPS3-202ENST00000460120 TRIM7Q9C029 511 aa19.52■□□□□ 0.71
HPS3-202ENST00000460120 RTN2O75298 545 aa19.51■□□□□ 0.71
HPS3-202ENST00000460120 CYP11B1P15538 503 aa19.51■□□□□ 0.71
HPS3-202ENST00000460120 MFAP3P55082 362 aa19.51■□□□□ 0.71
HPS3-202ENST00000460120 CORO7P57737 925 aa19.51■□□□□ 0.71
HPS3-202ENST00000460120 MAGOHP61326 146 aaKnown RBP19.51■□□□□ 0.71
HPS3-202ENST00000460120 KRT39Q6A163 491 aa19.51■□□□□ 0.71
HPS3-202ENST00000460120 CD302Q8IX05 232 aa19.51■□□□□ 0.71
HPS3-202ENST00000460120 FBXO25Q8TCJ0 367 aa19.51■□□□□ 0.71
HPS3-202ENST00000460120 PARD3BQ8TEW8 1205 aa19.51■□□□□ 0.71
HPS3-202ENST00000460120 ZSWIM1Q9BR11 485 aa19.51■□□□□ 0.71
HPS3-202ENST00000460120 NR3C2P08235 984 aa19.51■□□□□ 0.71
HPS3-202ENST00000460120 MDH1P40925 334 aaKnown RBP19.51■□□□□ 0.71
HPS3-202ENST00000460120 SNX1Q13596 522 aa19.51■□□□□ 0.71
HPS3-202ENST00000460120 ALCAMQ13740 583 aa19.51■□□□□ 0.71
HPS3-202ENST00000460120 MTERF2Q49AM1 385 aa19.51■□□□□ 0.71
HPS3-202ENST00000460120 CCDC25Q86WR0 208 aa19.51■□□□□ 0.71
HPS3-202ENST00000460120 FAM71AQ8IYT1 594 aa19.51■□□□□ 0.71
HPS3-202ENST00000460120 ERP44Q9BS26 406 aa19.51■□□□□ 0.71
HPS3-202ENST00000460120 DEFB129Q9H1M3 183 aa19.51■□□□□ 0.71
HPS3-202ENST00000460120 FAM114A2Q9NRY5 505 aa19.51■□□□□ 0.71
HPS3-202ENST00000460120 PFASO15067 1338 aa19.5■□□□□ 0.71
HPS3-202ENST00000460120 PDE6CP51160 858 aa19.5■□□□□ 0.71
HPS3-202ENST00000460120 NIPA1Q7RTP0 329 aa19.5■□□□□ 0.71
HPS3-202ENST00000460120 PRELID2Q8N945 189 aa19.5■□□□□ 0.71
HPS3-202ENST00000460120 RAB17Q9H0T7 212 aa19.5■□□□□ 0.71
HPS3-202ENST00000460120 CNOT8Q9UFF9 292 aaKnown RBP19.5■□□□□ 0.71
HPS3-202ENST00000460120 HACL1Q9UJ83 578 aa19.5■□□□□ 0.71
HPS3-202ENST00000460120 ZBTB7AO95365 584 aa19.5■□□□□ 0.71
HPS3-202ENST00000460120 HARSP12081 509 aaKnown RBP19.5■□□□□ 0.71
HPS3-202ENST00000460120 JAK3P52333 1124 aa19.5■□□□□ 0.71
HPS3-202ENST00000460120 SEL1L2Q5TEA6 688 aa19.5■□□□□ 0.71
HPS3-202ENST00000460120 SV2AQ7L0J3 742 aa19.5■□□□□ 0.71
HPS3-202ENST00000460120 MICALL2Q8IY33 904 aa19.5■□□□□ 0.71
HPS3-202ENST00000460120 CCDC105Q8IYK2 499 aa19.5■□□□□ 0.71
HPS3-202ENST00000460120 NT5C1BQ96P26 610 aa19.5■□□□□ 0.71
HPS3-202ENST00000460120 MOV10L1Q9BXT6 1211 aaKnown RBP19.5■□□□□ 0.71
HPS3-202ENST00000460120 PCDHA10Q9Y5I2 948 aa19.5■□□□□ 0.71
HPS3-202ENST00000460120 RFX1P22670 979 aa19.49■□□□□ 0.71
HPS3-202ENST00000460120 KRT76Q01546 638 aa19.49■□□□□ 0.71
HPS3-202ENST00000460120 MYBPC2Q14324 1141 aa19.49■□□□□ 0.71
HPS3-202ENST00000460120 PTGISQ16647 500 aa19.49■□□□□ 0.71
HPS3-202ENST00000460120 SPOPLQ6IQ16 392 aa19.49■□□□□ 0.71
HPS3-202ENST00000460120 MDM1Q8TC05 714 aa19.49■□□□□ 0.71
HPS3-202ENST00000460120 HELQQ8TDG4 1101 aa19.49■□□□□ 0.71
HPS3-202ENST00000460120 CPA5Q8WXQ8 436 aa19.49■□□□□ 0.71
HPS3-202ENST00000460120 ZBED3Q96IU2 234 aaPredicted RBP19.49■□□□□ 0.71
HPS3-202ENST00000460120 NAP1L3Q99457 506 aaPredicted RBP19.49■□□□□ 0.71
HPS3-202ENST00000460120 RAB20Q9NX57 234 aa19.49■□□□□ 0.71
HPS3-202ENST00000460120 EXOC7Q9UPT5 735 aa19.49■□□□□ 0.71
HPS3-202ENST00000460120 SLCO1A2P46721 670 aa19.49■□□□□ 0.71
HPS3-202ENST00000460120 ACOT2P49753 483 aa19.49■□□□□ 0.71
HPS3-202ENST00000460120 SEZ6Q53EL9 994 aa19.49■□□□□ 0.71
HPS3-202ENST00000460120 CHADLQ6NUI6 762 aa19.49■□□□□ 0.71
HPS3-202ENST00000460120 CCDC137Q6PK04 289 aaKnown RBP19.49■□□□□ 0.71
HPS3-202ENST00000460120 PASD1Q8IV76 773 aa19.49■□□□□ 0.71
HPS3-202ENST00000460120 MTMR14Q8NCE2 650 aa19.49■□□□□ 0.71
HPS3-202ENST00000460120 FBXL13Q8NEE6 735 aa19.49■□□□□ 0.71
HPS3-202ENST00000460120 WRNIP1Q96S55 665 aa19.49■□□□□ 0.71
HPS3-202ENST00000460120 FAM118BQ9BPY3 351 aa19.49■□□□□ 0.71
HPS3-202ENST00000460120 MAPTP10636 758 aaKnown RBP19.48■□□□□ 0.71
HPS3-202ENST00000460120 FGFR4P22455 802 aa19.48■□□□□ 0.71
HPS3-202ENST00000460120 GJC1P36383 396 aa19.48■□□□□ 0.71
HPS3-202ENST00000460120 FMNL3Q8IVF7 1028 aa19.48■□□□□ 0.71
HPS3-202ENST00000460120 MAP4K3Q8IVH8 894 aa19.48■□□□□ 0.71
HPS3-202ENST00000460120 CCDC60Q8IWA6 550 aaPredicted RBP19.48■□□□□ 0.71
HPS3-202ENST00000460120 C1orf54Q8WWF1 131 aa19.48■□□□□ 0.71
HPS3-202ENST00000460120 TMEM143Q96AN5 459 aa19.48■□□□□ 0.71
HPS3-202ENST00000460120 CLDN3O15551 220 aa19.48■□□□□ 0.71
HPS3-202ENST00000460120 RPL21P46778 160 aaKnown RBP19.48■□□□□ 0.71
HPS3-202ENST00000460120 WNT7BP56706 349 aa19.48■□□□□ 0.71
HPS3-202ENST00000460120 TRIP13Q15645 432 aaPredicted RBP19.48■□□□□ 0.71
HPS3-202ENST00000460120 DUPD1Q68J44 220 aa19.48■□□□□ 0.71
HPS3-202ENST00000460120 LRIG3Q6UXM1 1119 aa19.48■□□□□ 0.71
HPS3-202ENST00000460120 ZNF473Q8WTR7 871 aaKnown RBP19.48■□□□□ 0.71
HPS3-202ENST00000460120 EPN3Q9H201 632 aa19.48■□□□□ 0.71
HPS3-202ENST00000460120 DNAJC17Q9NVM6 304 aaKnown RBP19.48■□□□□ 0.71
HPS3-202ENST00000460120 CAND2O75155 1236 aa19.47■□□□□ 0.71
HPS3-202ENST00000460120 LYPLA2O95372 231 aa19.47■□□□□ 0.71
HPS3-202ENST00000460120 CCND2P30279 289 aa19.47■□□□□ 0.71
HPS3-202ENST00000460120 MAGEA9P43362 315 aa19.47■□□□□ 0.71
HPS3-202ENST00000460120 GMPSP49915 693 aaPredicted RBP19.47■□□□□ 0.71
HPS3-202ENST00000460120 RNF187Q5TA31 235 aaPredicted RBP19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 186.1 ms