RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 EIF2AQ9BY44 585 aaKnown RBP17.2■□□□□ 0.34
SDF4-204ENST00000459994 TLE6Q9H808 572 aa17.2■□□□□ 0.34
SDF4-204ENST00000459994 TBC1D13Q9NVG8 400 aa17.2■□□□□ 0.34
SDF4-204ENST00000459994 KBTBD4Q9NVX7 518 aa17.2■□□□□ 0.34
SDF4-204ENST00000459994 PCDHB2Q9Y5E7 798 aa17.2■□□□□ 0.34
SDF4-204ENST00000459994 C2orf16Q68DN1 1984 aa17.2■□□□□ 0.34
SDF4-204ENST00000459994 C19orf67A6NJJ6 358 aa17.19■□□□□ 0.34
SDF4-204ENST00000459994 B4GALT5O43286 388 aa17.19■□□□□ 0.34
SDF4-204ENST00000459994 TSPAN1O60635 241 aa17.19■□□□□ 0.34
SDF4-204ENST00000459994 ZNF623O75123 536 aa17.19■□□□□ 0.34
SDF4-204ENST00000459994 ZC3H11AO75152 810 aaKnown RBP eCLIP17.19■□□□□ 0.34
SDF4-204ENST00000459994 PLA2G4BP0C869 781 aa17.19■□□□□ 0.34
SDF4-204ENST00000459994 SSTR3P32745 418 aaPredicted RBP17.19■□□□□ 0.34
SDF4-204ENST00000459994 PTENP60484 403 aa17.19■□□□□ 0.34
SDF4-204ENST00000459994 SMAD4Q13485 552 aaKnown RBP17.19■□□□□ 0.34
SDF4-204ENST00000459994 KCNC3Q14003 757 aa17.19■□□□□ 0.34
SDF4-204ENST00000459994 AMHR2Q16671 573 aa17.19■□□□□ 0.34
SDF4-204ENST00000459994 PUS10Q3MIT2 529 aaKnown RBP17.19■□□□□ 0.34
SDF4-204ENST00000459994 SV2BQ7L1I2 683 aa17.19■□□□□ 0.34
SDF4-204ENST00000459994 CDR2LQ86X02 465 aaPredicted RBP17.19■□□□□ 0.34
SDF4-204ENST00000459994 SYT2Q8N9I0 419 aaPredicted RBP17.19■□□□□ 0.34
SDF4-204ENST00000459994 CNNM3Q8NE01 707 aa17.19■□□□□ 0.34
SDF4-204ENST00000459994 FEZF2Q8TBJ5 459 aa17.19■□□□□ 0.34
SDF4-204ENST00000459994 AUTS2Q8WXX7 1259 aa17.19■□□□□ 0.34
SDF4-204ENST00000459994 VN1R3Q9BXE9 311 aa17.19■□□□□ 0.34
SDF4-204ENST00000459994 POLR3FQ9H1D9 316 aaPredicted RBP17.19■□□□□ 0.34
SDF4-204ENST00000459994 RNF39Q9H2S5 420 aa17.19■□□□□ 0.34
SDF4-204ENST00000459994 TNMDQ9H2S6 317 aa17.19■□□□□ 0.34
SDF4-204ENST00000459994 POLD4Q9HCU8 107 aa17.19■□□□□ 0.34
SDF4-204ENST00000459994 SPG21Q9NZD8 308 aa17.19■□□□□ 0.34
SDF4-204ENST00000459994 CDH22Q9UJ99 828 aa17.19■□□□□ 0.34
SDF4-204ENST00000459994 LZTS1Q9Y250 596 aa17.19■□□□□ 0.34
SDF4-204ENST00000459994 GAS2O43903 313 aaKnown RBP17.18■□□□□ 0.34
SDF4-204ENST00000459994 DDHD2O94830 711 aa17.18■□□□□ 0.34
SDF4-204ENST00000459994 SLC12A3P55017 1021 aa17.18■□□□□ 0.34
SDF4-204ENST00000459994 AMPD3Q01432 767 aa17.18■□□□□ 0.34
SDF4-204ENST00000459994 MBTD1Q05BQ5 628 aa17.18■□□□□ 0.34
SDF4-204ENST00000459994 MCM6Q14566 821 aa17.18■□□□□ 0.34
SDF4-204ENST00000459994 NOMO2Q5JPE7 1267 aa17.18■□□□□ 0.34
SDF4-204ENST00000459994 LLGL2Q6P1M3 1020 aa17.18■□□□□ 0.34
SDF4-204ENST00000459994 MRPL10Q7Z7H8 261 aaKnown RBP17.18■□□□□ 0.34
SDF4-204ENST00000459994 SMRP1Q8NCR6 262 aa17.18■□□□□ 0.34
SDF4-204ENST00000459994 BSNDQ8WZ55 320 aa17.18■□□□□ 0.34
SDF4-204ENST00000459994 APOL5Q9BWW9 433 aa17.18■□□□□ 0.34
SDF4-204ENST00000459994 LRRC27Q9C0I9 530 aa17.18■□□□□ 0.34
SDF4-204ENST00000459994 GBP3Q9H0R5 595 aa17.18■□□□□ 0.34
SDF4-204ENST00000459994 BHMT2Q9H2M3 363 aa17.18■□□□□ 0.34
SDF4-204ENST00000459994 ENTPD7Q9NQZ7 604 aa17.18■□□□□ 0.34
SDF4-204ENST00000459994 HES2Q9Y543 173 aa17.18■□□□□ 0.34
SDF4-204ENST00000459994 ARHGEF35A5YM69 484 aa17.17■□□□□ 0.34
SDF4-204ENST00000459994 TTLL13PA6NNM8 815 aa17.17■□□□□ 0.34
SDF4-204ENST00000459994 PI4K2BG5E9Z4 385 aa17.17■□□□□ 0.34
SDF4-204ENST00000459994 ASAP2O43150 1006 aa17.17■□□□□ 0.34
SDF4-204ENST00000459994 TRAK2O60296 914 aa17.17■□□□□ 0.34
SDF4-204ENST00000459994 DGAT1O75907 488 aa17.17■□□□□ 0.34
SDF4-204ENST00000459994 MYL1P05976 194 aa17.17■□□□□ 0.34
SDF4-204ENST00000459994 SLC11A1P49279 550 aa17.17■□□□□ 0.34
SDF4-204ENST00000459994 COASYQ13057 564 aa17.17■□□□□ 0.34
SDF4-204ENST00000459994 IFNLR1Q8IU57 520 aaPredicted RBP17.17■□□□□ 0.34
SDF4-204ENST00000459994 ADHFE1Q8IWW8 467 aa17.17■□□□□ 0.34
SDF4-204ENST00000459994 EXOC8Q8IYI6 725 aa17.17■□□□□ 0.34
SDF4-204ENST00000459994 PAGE5Q96GU1 130 aa17.17■□□□□ 0.34
SDF4-204ENST00000459994 LRFN3Q9BTN0 628 aa17.17■□□□□ 0.34
SDF4-204ENST00000459994 MRPL9Q9BYD2 267 aaKnown RBP17.17■□□□□ 0.34
SDF4-204ENST00000459994 CLSTN2Q9H4D0 955 aa17.17■□□□□ 0.34
SDF4-204ENST00000459994 MIOSQ9NXC5 875 aa17.17■□□□□ 0.34
SDF4-204ENST00000459994 KCND2Q9NZV8 630 aa17.17■□□□□ 0.34
SDF4-204ENST00000459994 DENND4AQ7Z401 1863 aa17.16■□□□□ 0.34
SDF4-204ENST00000459994 C2orf71A6NGG8 1288 aa17.16■□□□□ 0.34
SDF4-204ENST00000459994 INO80B-WBP1J3KQ70 363 aa17.16■□□□□ 0.34
SDF4-204ENST00000459994 EDN1P05305 212 aa17.16■□□□□ 0.34
SDF4-204ENST00000459994 GALTP07902 379 aa17.16■□□□□ 0.34
SDF4-204ENST00000459994 ARF4P18085 180 aaPredicted RBP17.16■□□□□ 0.34
SDF4-204ENST00000459994 PPM1AP35813 382 aa17.16■□□□□ 0.34
SDF4-204ENST00000459994 RAB27AP51159 221 aa17.16■□□□□ 0.34
SDF4-204ENST00000459994 CNNM4Q6P4Q7 775 aa17.16■□□□□ 0.34
SDF4-204ENST00000459994 GLB1LQ6UWU2 654 aa17.16■□□□□ 0.34
SDF4-204ENST00000459994 TMC7Q7Z402 723 aa17.16■□□□□ 0.34
SDF4-204ENST00000459994 PPP2R3CQ969Q6 453 aa17.16■□□□□ 0.34
SDF4-204ENST00000459994 CCDC43Q96MW1 224 aaKnown RBP17.16■□□□□ 0.34
SDF4-204ENST00000459994 RSAD1Q9HA92 442 aa17.16■□□□□ 0.34
SDF4-204ENST00000459994 HOOK1Q9UJC3 728 aaKnown RBP17.16■□□□□ 0.34
SDF4-204ENST00000459994 USP20Q9Y2K6 914 aa17.16■□□□□ 0.34
SDF4-204ENST00000459994 USP15Q9Y4E8 981 aaPredicted RBP17.16■□□□□ 0.34
SDF4-204ENST00000459994 IPPQ9Y573 584 aa17.16■□□□□ 0.34
SDF4-204ENST00000459994 F8W810 466 aa17.15■□□□□ 0.34
SDF4-204ENST00000459994 ERLIN2O94905 339 aa17.15■□□□□ 0.34
SDF4-204ENST00000459994 POMCP01189 267 aa17.15■□□□□ 0.34
SDF4-204ENST00000459994 SSBP05455 408 aaKnown RBP eCLIP17.15■□□□□ 0.34
SDF4-204ENST00000459994 SKIP12755 728 aa17.15■□□□□ 0.34
SDF4-204ENST00000459994 CYP11B2P19099 503 aa17.15■□□□□ 0.34
SDF4-204ENST00000459994 MXD4Q14582 209 aaPredicted RBP17.15■□□□□ 0.34
SDF4-204ENST00000459994 RINT1Q6NUQ1 792 aa17.15■□□□□ 0.34
SDF4-204ENST00000459994 SYCE2Q6PIF2 218 aa17.15■□□□□ 0.34
SDF4-204ENST00000459994 PADI6Q6TGC4 694 aa17.15■□□□□ 0.34
SDF4-204ENST00000459994 C1orf186Q6ZWK4 172 aa17.15■□□□□ 0.34
SDF4-204ENST00000459994 GPBP1Q86WP2 473 aa17.15■□□□□ 0.34
SDF4-204ENST00000459994 IGSF21Q96ID5 467 aa17.15■□□□□ 0.34
SDF4-204ENST00000459994 C7orf25Q9BPX7 421 aa17.15■□□□□ 0.34
SDF4-204ENST00000459994 ZBP1Q9H171 429 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms