RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 ADPGKQ9BRR6 497 aa14.07□□□□□ -0.16
COL18A1-206ENST00000459895 HAPLN2Q9GZV7 340 aa14.07□□□□□ -0.16
COL18A1-206ENST00000459895 RNF39Q9H2S5 420 aa14.07□□□□□ -0.16
COL18A1-206ENST00000459895 TTYH1Q9H313 450 aaPredicted RBP14.07□□□□□ -0.16
COL18A1-206ENST00000459895 PTPRHQ9HD43 1115 aa14.07□□□□□ -0.16
COL18A1-206ENST00000459895 MSRAQ9UJ68 235 aa14.07□□□□□ -0.16
COL18A1-206ENST00000459895 INSL6Q9Y581 213 aa14.07□□□□□ -0.16
COL18A1-206ENST00000459895 MRPL42Q9Y6G3 142 aaKnown RBP14.07□□□□□ -0.16
COL18A1-206ENST00000459895 UBE4BO95155 1302 aa14.07□□□□□ -0.16
COL18A1-206ENST00000459895 TRIP11Q15643 1979 aa14.06□□□□□ -0.16
COL18A1-206ENST00000459895 PVALEFA0A1B0GWK0 134 aa14.06□□□□□ -0.16
COL18A1-206ENST00000459895 ZNF623O75123 536 aa14.06□□□□□ -0.16
COL18A1-206ENST00000459895 TOM1L1O75674 476 aa14.06□□□□□ -0.16
COL18A1-206ENST00000459895 RECQL4O94761 1208 aa14.06□□□□□ -0.16
COL18A1-206ENST00000459895 RPN1P04843 607 aaKnown RBP14.06□□□□□ -0.16
COL18A1-206ENST00000459895 SKIP12755 728 aa14.06□□□□□ -0.16
COL18A1-206ENST00000459895 SCP2P22307 547 aa14.06□□□□□ -0.16
COL18A1-206ENST00000459895 TAP1Q03518 808 aa14.06□□□□□ -0.16
COL18A1-206ENST00000459895 NCBP1Q09161 790 aaKnown RBP14.06□□□□□ -0.16
COL18A1-206ENST00000459895 ALCAMQ13740 583 aa14.06□□□□□ -0.16
COL18A1-206ENST00000459895 BTG3Q14201 252 aaPredicted RBP14.06□□□□□ -0.16
COL18A1-206ENST00000459895 ZPBP2Q6X784 338 aa14.06□□□□□ -0.16
COL18A1-206ENST00000459895 EPM2AIP1Q7L775 607 aaPredicted RBP14.06□□□□□ -0.16
COL18A1-206ENST00000459895 MRPL10Q7Z7H8 261 aaKnown RBP14.06□□□□□ -0.16
COL18A1-206ENST00000459895 ZBTB33Q86T24 672 aa14.06□□□□□ -0.16
COL18A1-206ENST00000459895 LRRC43Q8N309 656 aa14.06□□□□□ -0.16
COL18A1-206ENST00000459895 ZBTB45Q96K62 511 aaPredicted RBP14.06□□□□□ -0.16
COL18A1-206ENST00000459895 CASD1Q96PB1 797 aa14.06□□□□□ -0.16
COL18A1-206ENST00000459895 TMEM117Q9H0C3 514 aa14.06□□□□□ -0.16
COL18A1-206ENST00000459895 RSAD1Q9HA92 442 aa14.06□□□□□ -0.16
COL18A1-206ENST00000459895 LMBRD1Q9NUN5 540 aa14.06□□□□□ -0.16
COL18A1-206ENST00000459895 KCNG1Q9UIX4 513 aa14.06□□□□□ -0.16
COL18A1-206ENST00000459895 MTUS1Q9ULD2 1270 aa14.06□□□□□ -0.16
COL18A1-206ENST00000459895 INPP5FQ9Y2H2 1132 aa14.06□□□□□ -0.16
COL18A1-206ENST00000459895 TSC2P49815 1807 aa14.06□□□□□ -0.16
COL18A1-206ENST00000459895 EIF3DO15371 548 aaKnown RBP eCLIP14.05□□□□□ -0.16
COL18A1-206ENST00000459895 HOXA2O43364 376 aa14.05□□□□□ -0.16
COL18A1-206ENST00000459895 B4GALT3O60512 393 aa14.05□□□□□ -0.16
COL18A1-206ENST00000459895 PRPF6O94906 941 aaKnown RBP14.05□□□□□ -0.16
COL18A1-206ENST00000459895 EOMESO95936 686 aa14.05□□□□□ -0.16
COL18A1-206ENST00000459895 ITGA4P13612 1032 aa14.05□□□□□ -0.16
COL18A1-206ENST00000459895 AKAP5P24588 427 aa14.05□□□□□ -0.16
COL18A1-206ENST00000459895 ABCD1P33897 745 aa14.05□□□□□ -0.16
COL18A1-206ENST00000459895 HOXD13P35453 343 aa14.05□□□□□ -0.16
COL18A1-206ENST00000459895 AFF1P51825 1210 aaKnown RBP14.05□□□□□ -0.16
COL18A1-206ENST00000459895 MCL1Q07820 350 aa14.05□□□□□ -0.16
COL18A1-206ENST00000459895 ZNF697Q5TEC3 545 aa14.05□□□□□ -0.16
COL18A1-206ENST00000459895 GLB1LQ6UWU2 654 aa14.05□□□□□ -0.16
COL18A1-206ENST00000459895 Q7L0L9 218 aa14.05□□□□□ -0.16
COL18A1-206ENST00000459895 TMEM192Q8IY95 271 aa14.05□□□□□ -0.16
COL18A1-206ENST00000459895 ABI1Q8IZP0 508 aa14.05□□□□□ -0.16
COL18A1-206ENST00000459895 ZFP42Q96MM3 310 aa14.05□□□□□ -0.16
COL18A1-206ENST00000459895 TIGD1Q96MW7 591 aa14.05□□□□□ -0.16
COL18A1-206ENST00000459895 C17orf80Q9BSJ5 609 aa14.05□□□□□ -0.16
COL18A1-206ENST00000459895 SLC39A2Q9NP94 309 aa14.05□□□□□ -0.16
COL18A1-206ENST00000459895 TMEM265A0A087WTH1 108 aa14.04□□□□□ -0.16
COL18A1-206ENST00000459895 EPOPA6NHQ4 379 aa14.04□□□□□ -0.16
COL18A1-206ENST00000459895 ANKRD63C9JTQ0 380 aa14.04□□□□□ -0.16
COL18A1-206ENST00000459895 MEFVO15553 781 aaPredicted RBP14.04□□□□□ -0.16
COL18A1-206ENST00000459895 FAM189A1O60320 539 aa14.04□□□□□ -0.16
COL18A1-206ENST00000459895 MCF2P10911 925 aa14.04□□□□□ -0.16
COL18A1-206ENST00000459895 GRM5P41594 1212 aa14.04□□□□□ -0.16
COL18A1-206ENST00000459895 SCNN1GP51170 649 aa14.04□□□□□ -0.16
COL18A1-206ENST00000459895 OSTNP61366 133 aa14.04□□□□□ -0.16
COL18A1-206ENST00000459895 SEZ6Q53EL9 994 aa14.04□□□□□ -0.16
COL18A1-206ENST00000459895 ZBTB41Q5SVQ8 909 aa14.04□□□□□ -0.16
COL18A1-206ENST00000459895 KANK3Q6NY19 840 aa14.04□□□□□ -0.16
COL18A1-206ENST00000459895 NELFCDQ8IXH7 590 aa14.04□□□□□ -0.16
COL18A1-206ENST00000459895 HACE1Q8IYU2 909 aa14.04□□□□□ -0.16
COL18A1-206ENST00000459895 SCFD1Q8WVM8 642 aa14.04□□□□□ -0.16
COL18A1-206ENST00000459895 PGBD4Q96DM1 585 aa14.04□□□□□ -0.16
COL18A1-206ENST00000459895 FAM161BQ96MY7 647 aa14.04□□□□□ -0.16
COL18A1-206ENST00000459895 ACCSQ96QU6 501 aa14.04□□□□□ -0.16
COL18A1-206ENST00000459895 CXCL16Q9H2A7 254 aa14.04□□□□□ -0.16
COL18A1-206ENST00000459895 CERS4Q9HA82 394 aa14.04□□□□□ -0.16
COL18A1-206ENST00000459895 SLC28A3Q9HAS3 691 aa14.04□□□□□ -0.16
COL18A1-206ENST00000459895 TBC1D13Q9NVG8 400 aa14.04□□□□□ -0.16
COL18A1-206ENST00000459895 RNF216Q9NWF9 866 aaPredicted RBP14.04□□□□□ -0.16
COL18A1-206ENST00000459895 SNTG2Q9NY99 539 aa14.04□□□□□ -0.16
COL18A1-206ENST00000459895 PLAGL2Q9UPG8 496 aa14.04□□□□□ -0.16
COL18A1-206ENST00000459895 GDAQ9Y2T3 454 aa14.04□□□□□ -0.16
COL18A1-206ENST00000459895 EYSQ5T1H1 3165 aa14.03□□□□□ -0.16
COL18A1-206ENST00000459895 ARL5CA6NH57 179 aa14.03□□□□□ -0.16
COL18A1-206ENST00000459895 INPPL1O15357 1258 aa14.03□□□□□ -0.16
COL18A1-206ENST00000459895 OFD1O75665 1012 aa14.03□□□□□ -0.16
COL18A1-206ENST00000459895 RHOBTB3O94955 611 aa14.03□□□□□ -0.16
COL18A1-206ENST00000459895 CTNNB1P35222 781 aa14.03□□□□□ -0.16
COL18A1-206ENST00000459895 PBX3P40426 434 aa14.03□□□□□ -0.16
COL18A1-206ENST00000459895 TNFSF9P41273 254 aa14.03□□□□□ -0.16
COL18A1-206ENST00000459895 MATR3P43243 847 aaKnown RBP eCLIP14.03□□□□□ -0.16
COL18A1-206ENST00000459895 STK4Q13043 487 aa14.03□□□□□ -0.16
COL18A1-206ENST00000459895 BMT2Q1RMZ1 405 aa14.03□□□□□ -0.16
COL18A1-206ENST00000459895 NOMO2Q5JPE7 1267 aa14.03□□□□□ -0.16
COL18A1-206ENST00000459895 LRRC55Q6ZSA7 311 aa14.03□□□□□ -0.16
COL18A1-206ENST00000459895 STXBP4Q6ZWJ1 553 aa14.03□□□□□ -0.16
COL18A1-206ENST00000459895 FIBCD1Q8N539 461 aa14.03□□□□□ -0.16
COL18A1-206ENST00000459895 GDPD5Q8WTR4 605 aa14.03□□□□□ -0.16
COL18A1-206ENST00000459895 CCDC34Q96HJ3 373 aa14.03□□□□□ -0.16
COL18A1-206ENST00000459895 SNX27Q96L92 541 aa14.03□□□□□ -0.16
COL18A1-206ENST00000459895 GAD1Q99259 594 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms