RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 GALTP07902 379 aa22.79■■□□□ 1.24
VARS-218ENST00000459667 SLC11A1P49279 550 aa22.79■■□□□ 1.24
VARS-218ENST00000459667 ZNF131P52739 623 aa22.79■■□□□ 1.24
VARS-218ENST00000459667 NCKAP1LP55160 1127 aa22.79■■□□□ 1.24
VARS-218ENST00000459667 MRPS5P82675 430 aaKnown RBP22.79■■□□□ 1.24
VARS-218ENST00000459667 STRN3Q13033 797 aa22.79■■□□□ 1.24
VARS-218ENST00000459667 APBB1IPQ7Z5R6 666 aaPredicted RBP22.79■■□□□ 1.24
VARS-218ENST00000459667 MYCT1Q8N699 235 aa22.79■■□□□ 1.24
VARS-218ENST00000459667 KCNG4Q8TDN1 519 aa22.79■■□□□ 1.24
VARS-218ENST00000459667 TMEM169Q96HH4 297 aa22.79■■□□□ 1.24
VARS-218ENST00000459667 ACO2Q99798 780 aaKnown RBP22.79■■□□□ 1.24
VARS-218ENST00000459667 PANK2Q9BZ23 570 aa22.79■■□□□ 1.24
VARS-218ENST00000459667 ZHX3Q9H4I2 956 aa22.79■■□□□ 1.24
VARS-218ENST00000459667 UBE2ZQ9H832 354 aaPredicted RBP22.79■■□□□ 1.24
VARS-218ENST00000459667 PARVGQ9HBI0 331 aa22.79■■□□□ 1.24
VARS-218ENST00000459667 MIOSQ9NXC5 875 aa22.79■■□□□ 1.24
VARS-218ENST00000459667 SNTG2Q9NY99 539 aa22.79■■□□□ 1.24
VARS-218ENST00000459667 KLK14Q9P0G3 267 aa22.79■■□□□ 1.24
VARS-218ENST00000459667 CFAP45Q9UL16 551 aa22.79■■□□□ 1.24
VARS-218ENST00000459667 PCDHGC5Q9Y5F6 944 aa22.79■■□□□ 1.24
VARS-218ENST00000459667 A0A087X0B3 334 aa22.78■■□□□ 1.24
VARS-218ENST00000459667 H0YCG3 227 aa22.78■■□□□ 1.24
VARS-218ENST00000459667 MAPTP10636 758 aaKnown RBP22.78■■□□□ 1.24
VARS-218ENST00000459667 ERVFC1P60507 584 aa22.78■■□□□ 1.24
VARS-218ENST00000459667 HYAL1Q12794 435 aa22.78■■□□□ 1.24
VARS-218ENST00000459667 AAK1Q2M2I8 961 aa22.78■■□□□ 1.24
VARS-218ENST00000459667 SV2BQ7L1I2 683 aa22.78■■□□□ 1.24
VARS-218ENST00000459667 ADGRD2Q7Z7M1 963 aa22.78■■□□□ 1.24
VARS-218ENST00000459667 TMEM173Q86WV6 379 aaPredicted RBP22.78■■□□□ 1.24
VARS-218ENST00000459667 PDILTQ8N807 584 aa22.78■■□□□ 1.24
VARS-218ENST00000459667 ASB2Q96Q27 587 aa22.78■■□□□ 1.24
VARS-218ENST00000459667 RPS6KC1Q96S38 1066 aa22.78■■□□□ 1.24
VARS-218ENST00000459667 TMEM175Q9BSA9 504 aa22.78■■□□□ 1.24
VARS-218ENST00000459667 TARS2Q9BW92 718 aaKnown RBP22.78■■□□□ 1.24
VARS-218ENST00000459667 ZDHHC9Q9Y397 364 aa22.78■■□□□ 1.24
VARS-218ENST00000459667 K7ENM7 598 aa22.77■■□□□ 1.24
VARS-218ENST00000459667 FSCN2O14926 492 aa22.77■■□□□ 1.24
VARS-218ENST00000459667 ZNF568Q3ZCX4 644 aa22.77■■□□□ 1.24
VARS-218ENST00000459667 TJAP1Q5JTD0 557 aa22.77■■□□□ 1.24
VARS-218ENST00000459667 PLPP4Q5VZY2 271 aa22.77■■□□□ 1.24
VARS-218ENST00000459667 PDE12Q6L8Q7 609 aaKnown RBP22.77■■□□□ 1.24
VARS-218ENST00000459667 GSTCDQ8NEC7 633 aa22.77■■□□□ 1.24
VARS-218ENST00000459667 PABPC5Q96DU9 382 aaKnown RBP22.77■■□□□ 1.24
VARS-218ENST00000459667 IGSF21Q96ID5 467 aa22.77■■□□□ 1.24
VARS-218ENST00000459667 TCF25Q9BQ70 676 aa22.77■■□□□ 1.24
VARS-218ENST00000459667 ENTPD7Q9NQZ7 604 aa22.77■■□□□ 1.24
VARS-218ENST00000459667 BRWD1Q9NSI6 2320 aa22.76■■□□□ 1.23
VARS-218ENST00000459667 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.76■■□□□ 1.23
VARS-218ENST00000459667 NCK2O43639 380 aa22.76■■□□□ 1.23
VARS-218ENST00000459667 TRAK2O60296 914 aa22.76■■□□□ 1.23
VARS-218ENST00000459667 RECQL4O94761 1208 aa22.76■■□□□ 1.23
VARS-218ENST00000459667 ME1P48163 572 aa22.76■■□□□ 1.23
VARS-218ENST00000459667 DSC1Q08554 894 aa22.76■■□□□ 1.23
VARS-218ENST00000459667 GRIK3Q13003 919 aa22.76■■□□□ 1.23
VARS-218ENST00000459667 SHC4Q6S5L8 630 aa22.76■■□□□ 1.23
VARS-218ENST00000459667 EP400NLQ6ZTU2 488 aa22.76■■□□□ 1.23
VARS-218ENST00000459667 DYMQ7RTS9 669 aa22.76■■□□□ 1.23
VARS-218ENST00000459667 HAUS6Q7Z4H7 955 aa22.76■■□□□ 1.23
VARS-218ENST00000459667 COLGALT2Q8IYK4 626 aa22.76■■□□□ 1.23
VARS-218ENST00000459667 BCL7CQ8WUZ0 217 aaPredicted RBP22.76■■□□□ 1.23
VARS-218ENST00000459667 CDT1Q9H211 546 aa22.76■■□□□ 1.23
VARS-218ENST00000459667 IGFLR1Q9H665 355 aa22.76■■□□□ 1.23
VARS-218ENST00000459667 PTPRHQ9HD43 1115 aa22.76■■□□□ 1.23
VARS-218ENST00000459667 CLDND1Q9NY35 253 aa22.76■■□□□ 1.23
VARS-218ENST00000459667 FAN1Q9Y2M0 1017 aa22.76■■□□□ 1.23
VARS-218ENST00000459667 GDAQ9Y2T3 454 aa22.76■■□□□ 1.23
VARS-218ENST00000459667 NRP1O14786 923 aa22.75■■□□□ 1.23
VARS-218ENST00000459667 ALDH2P05091 517 aa22.75■■□□□ 1.23
VARS-218ENST00000459667 KCNA5P22460 613 aa22.75■■□□□ 1.23
VARS-218ENST00000459667 GTF2F1P35269 517 aaKnown RBP eCLIP22.75■■□□□ 1.23
VARS-218ENST00000459667 NRIP1P48552 1158 aa22.75■■□□□ 1.23
VARS-218ENST00000459667 COL19A1Q14993 1142 aa22.75■■□□□ 1.23
VARS-218ENST00000459667 AXDND1Q5T1B0 1012 aaPredicted RBP22.75■■□□□ 1.23
VARS-218ENST00000459667 TMC7Q7Z402 723 aa22.75■■□□□ 1.23
VARS-218ENST00000459667 ZBTB33Q86T24 672 aa22.75■■□□□ 1.23
VARS-218ENST00000459667 RBM23Q86U06 439 aaKnown RBP22.75■■□□□ 1.23
VARS-218ENST00000459667 DDX12PQ92771 950 aa22.75■■□□□ 1.23
VARS-218ENST00000459667 TCHPQ9BT92 498 aa22.75■■□□□ 1.23
VARS-218ENST00000459667 NGRNQ9NPE2 291 aaKnown RBP22.75■■□□□ 1.23
VARS-218ENST00000459667 PCDHA7Q9UN72 937 aa22.75■■□□□ 1.23
VARS-218ENST00000459667 MYMKA6NI61 221 aa22.74■■□□□ 1.23
VARS-218ENST00000459667 SCP2P22307 547 aa22.74■■□□□ 1.23
VARS-218ENST00000459667 PROZP22891 400 aa22.74■■□□□ 1.23
VARS-218ENST00000459667 OR1G1P47890 313 aa22.74■■□□□ 1.23
VARS-218ENST00000459667 KCNQ1P51787 676 aa22.74■■□□□ 1.23
VARS-218ENST00000459667 MPZL3Q6UWV2 235 aa22.74■■□□□ 1.23
VARS-218ENST00000459667 DDX53Q86TM3 631 aaKnown RBP22.74■■□□□ 1.23
VARS-218ENST00000459667 FAM178BQ8IXR5 827 aa22.74■■□□□ 1.23
VARS-218ENST00000459667 KCNN1Q92952 543 aa22.74■■□□□ 1.23
VARS-218ENST00000459667 BICD1Q96G01 975 aa22.74■■□□□ 1.23
VARS-218ENST00000459667 TLE6Q9H808 572 aa22.74■■□□□ 1.23
VARS-218ENST00000459667 ANKFY1Q9P2R3 1169 aa22.74■■□□□ 1.23
VARS-218ENST00000459667 PRG3Q9Y2Y8 225 aaPredicted RBP22.74■■□□□ 1.23
VARS-218ENST00000459667 ATP6V1DQ9Y5K8 247 aa22.74■■□□□ 1.23
VARS-218ENST00000459667 ABLIM1O14639 778 aa22.73■■□□□ 1.23
VARS-218ENST00000459667 NR1I2O75469 434 aa22.73■■□□□ 1.23
VARS-218ENST00000459667 TOM1L1O75674 476 aa22.73■■□□□ 1.23
VARS-218ENST00000459667 MCF2P10911 925 aa22.73■■□□□ 1.23
VARS-218ENST00000459667 HARSP12081 509 aaKnown RBP22.73■■□□□ 1.23
VARS-218ENST00000459667 GRM5P41594 1212 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms