RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 RPS6KA5O75582 802 aa6.33□□□□□ -1.4
RNU1-88P-201ENST00000459274 PPP1R37O75864 691 aa6.33□□□□□ -1.4
RNU1-88P-201ENST00000459274 AKAP3O75969 853 aa6.33□□□□□ -1.4
RNU1-88P-201ENST00000459274 KIF4AO95239 1232 aa6.33□□□□□ -1.4
RNU1-88P-201ENST00000459274 PARNO95453 639 aaKnown RBP6.33□□□□□ -1.4
RNU1-88P-201ENST00000459274 PIGRP01833 764 aa6.33□□□□□ -1.4
RNU1-88P-201ENST00000459274 TUBB4AP04350 444 aa6.33□□□□□ -1.4
RNU1-88P-201ENST00000459274 CLTAP09496 248 aa6.33□□□□□ -1.4
RNU1-88P-201ENST00000459274 MCF2P10911 925 aa6.33□□□□□ -1.4
RNU1-88P-201ENST00000459274 ATF7P17544 494 aaPredicted RBP6.33□□□□□ -1.4
RNU1-88P-201ENST00000459274 PTGS1P23219 599 aa6.33□□□□□ -1.4
RNU1-88P-201ENST00000459274 CASP14P31944 242 aa6.33□□□□□ -1.4
RNU1-88P-201ENST00000459274 KRT9P35527 623 aa6.33□□□□□ -1.4
RNU1-88P-201ENST00000459274 THPOP40225 353 aa6.33□□□□□ -1.4
RNU1-88P-201ENST00000459274 FMO5P49326 533 aa6.33□□□□□ -1.4
RNU1-88P-201ENST00000459274 MXI1P50539 228 aa6.33□□□□□ -1.4
RNU1-88P-201ENST00000459274 ZBED6P86452 979 aa6.33□□□□□ -1.4
RNU1-88P-201ENST00000459274 MYO1EQ12965 1108 aa6.33□□□□□ -1.4
RNU1-88P-201ENST00000459274 NFX1Q12986 1120 aaKnown RBP6.33□□□□□ -1.4
RNU1-88P-201ENST00000459274 PTK7Q13308 1070 aa6.33□□□□□ -1.4
RNU1-88P-201ENST00000459274 RAPGEF1Q13905 1077 aa6.33□□□□□ -1.4
RNU1-88P-201ENST00000459274 FAM187BQ17R55 369 aa6.33□□□□□ -1.4
RNU1-88P-201ENST00000459274 DUOXA2Q1HG44 320 aa6.33□□□□□ -1.4
RNU1-88P-201ENST00000459274 KIZQ2M2Z5 673 aa6.33□□□□□ -1.4
RNU1-88P-201ENST00000459274 ZCWPW2Q504Y3 356 aa6.33□□□□□ -1.4
RNU1-88P-201ENST00000459274 SFMBT2Q5VUG0 894 aa6.33□□□□□ -1.4
RNU1-88P-201ENST00000459274 TWF2Q6IBS0 349 aaKnown RBP6.33□□□□□ -1.4
RNU1-88P-201ENST00000459274 SLC27A1Q6PCB7 646 aa6.33□□□□□ -1.4
RNU1-88P-201ENST00000459274 TSHZ1Q6ZSZ6 1077 aa6.33□□□□□ -1.4
RNU1-88P-201ENST00000459274 ENOSF1Q7L5Y1 443 aa6.33□□□□□ -1.4
RNU1-88P-201ENST00000459274 NT5DC4Q86YG4 428 aa6.33□□□□□ -1.4
RNU1-88P-201ENST00000459274 TRIM59Q8IWR1 403 aa6.33□□□□□ -1.4
RNU1-88P-201ENST00000459274 THNSL1Q8IYQ7 743 aa6.33□□□□□ -1.4
RNU1-88P-201ENST00000459274 FBXL13Q8NEE6 735 aa6.33□□□□□ -1.4
RNU1-88P-201ENST00000459274 TMEM174Q8WUU8 243 aa6.33□□□□□ -1.4
RNU1-88P-201ENST00000459274 PGBD4Q96DM1 585 aa6.33□□□□□ -1.4
RNU1-88P-201ENST00000459274 SAAL1Q96ER3 474 aa6.33□□□□□ -1.4
RNU1-88P-201ENST00000459274 CCDC42Q96M95 316 aa6.33□□□□□ -1.4
RNU1-88P-201ENST00000459274 NT5C1BQ96P26 610 aa6.33□□□□□ -1.4
RNU1-88P-201ENST00000459274 PPP1R16BQ96T49 567 aa6.33□□□□□ -1.4
RNU1-88P-201ENST00000459274 ACO2Q99798 780 aaKnown RBP6.33□□□□□ -1.4
RNU1-88P-201ENST00000459274 KIFC3Q9BVG8 833 aa6.33□□□□□ -1.4
RNU1-88P-201ENST00000459274 TARS2Q9BW92 718 aaKnown RBP6.33□□□□□ -1.4
RNU1-88P-201ENST00000459274 CELF4Q9BZC1 486 aaKnown RBP6.33□□□□□ -1.4
RNU1-88P-201ENST00000459274 PDCL3Q9H2J4 239 aa6.33□□□□□ -1.4
RNU1-88P-201ENST00000459274 CHST12Q9NRB3 414 aa6.33□□□□□ -1.4
RNU1-88P-201ENST00000459274 FAM207AQ9NSI2 230 aaPredicted RBP6.33□□□□□ -1.4
RNU1-88P-201ENST00000459274 WBP1LQ9NX94 342 aa6.33□□□□□ -1.4
RNU1-88P-201ENST00000459274 GCNT4Q9P109 453 aa6.33□□□□□ -1.4
RNU1-88P-201ENST00000459274 CEP72Q9P209 647 aa6.33□□□□□ -1.4
RNU1-88P-201ENST00000459274 GTF2IRD1Q9UHL9 959 aa6.33□□□□□ -1.4
RNU1-88P-201ENST00000459274 TSKSQ9UJT2 592 aa6.33□□□□□ -1.4
RNU1-88P-201ENST00000459274 TRPV2Q9Y5S1 764 aa6.33□□□□□ -1.4
RNU1-88P-201ENST00000459274 PTCH2Q9Y6C5 1203 aa6.33□□□□□ -1.4
RNU1-88P-201ENST00000459274 ZSWIM8A7E2V4 1837 aa6.33□□□□□ -1.4
RNU1-88P-201ENST00000459274 A0A0B4J269 797 aa6.32□□□□□ -1.4
RNU1-88P-201ENST00000459274 A0A1W2PQJ5 194 aa6.32□□□□□ -1.4
RNU1-88P-201ENST00000459274 MBLAC1A4D2B0 266 aaPredicted RBP6.32□□□□□ -1.4
RNU1-88P-201ENST00000459274 KIF2AO00139 706 aaPredicted RBP6.32□□□□□ -1.4
RNU1-88P-201ENST00000459274 DNM1LO00429 736 aa6.32□□□□□ -1.4
RNU1-88P-201ENST00000459274 ARHGAP6O43182 974 aa6.32□□□□□ -1.4
RNU1-88P-201ENST00000459274 TREHO43280 583 aa6.32□□□□□ -1.4
RNU1-88P-201ENST00000459274 AKR1B10O60218 316 aa6.32□□□□□ -1.4
RNU1-88P-201ENST00000459274 ZC3H11AO75152 810 aaKnown RBP eCLIP6.32□□□□□ -1.4
RNU1-88P-201ENST00000459274 MYCP01106 439 aaPredicted RBP6.32□□□□□ -1.4
RNU1-88P-201ENST00000459274 KRT19P08727 400 aa6.32□□□□□ -1.4
RNU1-88P-201ENST00000459274 CCDC175P0C221 793 aa6.32□□□□□ -1.4
RNU1-88P-201ENST00000459274 TBXAS1P24557 533 aaPredicted RBP6.32□□□□□ -1.4
RNU1-88P-201ENST00000459274 CTGFP29279 349 aa6.32□□□□□ -1.4
RNU1-88P-201ENST00000459274 USP8P40818 1118 aa6.32□□□□□ -1.4
RNU1-88P-201ENST00000459274 STAT1P42224 750 aa6.32□□□□□ -1.4
RNU1-88P-201ENST00000459274 PIK3CAP42336 1068 aa6.32□□□□□ -1.4
RNU1-88P-201ENST00000459274 ACOT2P49753 483 aa6.32□□□□□ -1.4
RNU1-88P-201ENST00000459274 RAB27AP51159 221 aa6.32□□□□□ -1.4
RNU1-88P-201ENST00000459274 ADKP55263 362 aaKnown RBP6.32□□□□□ -1.4
RNU1-88P-201ENST00000459274 BPIFB4P59827 614 aa6.32□□□□□ -1.4
RNU1-88P-201ENST00000459274 POLR2FP61218 127 aaKnown RBP6.32□□□□□ -1.4
RNU1-88P-201ENST00000459274 NKX3-2P78367 333 aa6.32□□□□□ -1.4
RNU1-88P-201ENST00000459274 MRPS6P82932 125 aaKnown RBP6.32□□□□□ -1.4
RNU1-88P-201ENST00000459274 CYP24A1Q07973 514 aa6.32□□□□□ -1.4
RNU1-88P-201ENST00000459274 RBL2Q08999 1139 aa6.32□□□□□ -1.4
RNU1-88P-201ENST00000459274 KCNA1Q09470 495 aa6.32□□□□□ -1.4
RNU1-88P-201ENST00000459274 TMEM62Q0P6H9 643 aa6.32□□□□□ -1.4
RNU1-88P-201ENST00000459274 PAK2Q13177 524 aa6.32□□□□□ -1.4
RNU1-88P-201ENST00000459274 TDRD12Q587J7 1177 aaKnown RBP6.32□□□□□ -1.4
RNU1-88P-201ENST00000459274 FIGNQ5HY92 759 aa6.32□□□□□ -1.4
RNU1-88P-201ENST00000459274 CDCA2Q69YH5 1023 aaPredicted RBP6.32□□□□□ -1.4
RNU1-88P-201ENST00000459274 FBXO46Q6PJ61 603 aaPredicted RBP6.32□□□□□ -1.4
RNU1-88P-201ENST00000459274 LRRC55Q6ZSA7 311 aa6.32□□□□□ -1.4
RNU1-88P-201ENST00000459274 RRAGAQ7L523 313 aa6.32□□□□□ -1.4
RNU1-88P-201ENST00000459274 KIAA1328Q86T90 577 aa6.32□□□□□ -1.4
RNU1-88P-201ENST00000459274 SESTD1Q86VW0 696 aa6.32□□□□□ -1.4
RNU1-88P-201ENST00000459274 IFNLR1Q8IU57 520 aaPredicted RBP6.32□□□□□ -1.4
RNU1-88P-201ENST00000459274 WDR49Q8IV35 697 aa6.32□□□□□ -1.4
RNU1-88P-201ENST00000459274 KIAA0319LQ8IZA0 1049 aa6.32□□□□□ -1.4
RNU1-88P-201ENST00000459274 TTC39CQ8N584 583 aa6.32□□□□□ -1.4
RNU1-88P-201ENST00000459274 GLIS3Q8NEA6 775 aa6.32□□□□□ -1.4
RNU1-88P-201ENST00000459274 CAGE1Q8TC20 777 aa6.32□□□□□ -1.4
RNU1-88P-201ENST00000459274 BSNDQ8WZ55 320 aa6.32□□□□□ -1.4
RNU1-88P-201ENST00000459274 KCNN1Q92952 543 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms