RNA–Protein interactions for RNA: ENST00000458085.6

CAPN13-203, Transcript of calpain 13, humanhuman

TSL 5

Gene CAPN13, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-203ENST00000458085 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.71■□□□□ 0.43
CAPN13-203ENST00000458085 SNX12Q9UMY4 172 aa17.71■□□□□ 0.43
CAPN13-203ENST00000458085 TRPC6Q9Y210 931 aa17.71■□□□□ 0.43
CAPN13-203ENST00000458085 IVNS1ABPQ9Y6Y0 642 aa17.71■□□□□ 0.43
CAPN13-203ENST00000458085 DOCK3Q8IZD9 2030 aa17.71■□□□□ 0.43
CAPN13-203ENST00000458085 PTPRJQ12913 1337 aa17.7■□□□□ 0.42
CAPN13-203ENST00000458085 CTAGE15A4D2H0 777 aa17.7■□□□□ 0.42
CAPN13-203ENST00000458085 CTAGE8P0CG41 777 aa17.7■□□□□ 0.42
CAPN13-203ENST00000458085 RFX1P22670 979 aa17.7■□□□□ 0.42
CAPN13-203ENST00000458085 KIF22Q14807 665 aa17.7■□□□□ 0.42
CAPN13-203ENST00000458085 CTAGE6Q86UF2 777 aa17.7■□□□□ 0.42
CAPN13-203ENST00000458085 CTAGE4Q8IX94 777 aa17.7■□□□□ 0.42
CAPN13-203ENST00000458085 PPM1KQ8N3J5 372 aa17.7■□□□□ 0.42
CAPN13-203ENST00000458085 PI4K2AQ9BTU6 479 aa17.7■□□□□ 0.42
CAPN13-203ENST00000458085 SMARCAD1Q9H4L7 1026 aa17.7■□□□□ 0.42
CAPN13-203ENST00000458085 TMEM134Q9H6X4 195 aa17.7■□□□□ 0.42
CAPN13-203ENST00000458085 ACP6Q9NPH0 428 aa17.7■□□□□ 0.42
CAPN13-203ENST00000458085 TMCO5BA8MYB1 307 aa17.7■□□□□ 0.42
CAPN13-203ENST00000458085 ANXA13P27216 316 aa17.7■□□□□ 0.42
CAPN13-203ENST00000458085 CXCR5P32302 372 aa17.7■□□□□ 0.42
CAPN13-203ENST00000458085 ABCD1P33897 745 aa17.7■□□□□ 0.42
CAPN13-203ENST00000458085 CLCN6P51797 869 aa17.7■□□□□ 0.42
CAPN13-203ENST00000458085 C10orf76Q5T2E6 689 aa17.7■□□□□ 0.42
CAPN13-203ENST00000458085 IER5Q5VY09 327 aa17.7■□□□□ 0.42
CAPN13-203ENST00000458085 MTERF4Q7Z6M4 381 aaKnown RBP17.7■□□□□ 0.42
CAPN13-203ENST00000458085 ABRAQ8N0Z2 381 aa17.7■□□□□ 0.42
CAPN13-203ENST00000458085 HELQQ8TDG4 1101 aa17.7■□□□□ 0.42
CAPN13-203ENST00000458085 PDE11AQ9HCR9 933 aa17.7■□□□□ 0.42
CAPN13-203ENST00000458085 TAS2R14Q9NYV8 317 aa17.7■□□□□ 0.42
CAPN13-203ENST00000458085 A0A0B4J269 797 aa17.69■□□□□ 0.42
CAPN13-203ENST00000458085 STRNO43815 780 aa17.69■□□□□ 0.42
CAPN13-203ENST00000458085 FTCDO95954 541 aa17.69■□□□□ 0.42
CAPN13-203ENST00000458085 HARSP12081 509 aaKnown RBP17.69■□□□□ 0.42
CAPN13-203ENST00000458085 GPC3P51654 580 aa17.69■□□□□ 0.42
CAPN13-203ENST00000458085 GRB14Q14449 540 aa17.69■□□□□ 0.42
CAPN13-203ENST00000458085 HSP90AA2PQ14568 343 aaPredicted RBP17.69■□□□□ 0.42
CAPN13-203ENST00000458085 VPS36Q86VN1 386 aa17.69■□□□□ 0.42
CAPN13-203ENST00000458085 GPR161Q8N6U8 529 aaKnown RBP17.69■□□□□ 0.42
CAPN13-203ENST00000458085 RNF149Q8NC42 400 aa17.69■□□□□ 0.42
CAPN13-203ENST00000458085 FBXL13Q8NEE6 735 aa17.69■□□□□ 0.42
CAPN13-203ENST00000458085 TATDN2Q93075 761 aa17.69■□□□□ 0.42
CAPN13-203ENST00000458085 MAP7D2Q96T17 732 aa17.69■□□□□ 0.42
CAPN13-203ENST00000458085 PARK7Q99497 189 aaKnown RBP17.69■□□□□ 0.42
CAPN13-203ENST00000458085 CCDC113Q9H0I3 377 aa17.69■□□□□ 0.42
CAPN13-203ENST00000458085 GOLPH3Q9H4A6 298 aa17.69■□□□□ 0.42
CAPN13-203ENST00000458085 ANKZF1Q9H8Y5 726 aa17.69■□□□□ 0.42
CAPN13-203ENST00000458085 VTA1Q9NP79 307 aa17.69■□□□□ 0.42
CAPN13-203ENST00000458085 ZNF446Q9NWS9 450 aa17.69■□□□□ 0.42
CAPN13-203ENST00000458085 RAB20Q9NX57 234 aa17.69■□□□□ 0.42
CAPN13-203ENST00000458085 DAAM1Q9Y4D1 1078 aa17.69■□□□□ 0.42
CAPN13-203ENST00000458085 ADGRA2Q96PE1 1338 aa17.69■□□□□ 0.42
CAPN13-203ENST00000458085 GRID2IPA4D2P6 1211 aa17.69■□□□□ 0.42
CAPN13-203ENST00000458085 MSCO60682 206 aa17.69■□□□□ 0.42
CAPN13-203ENST00000458085 MATR3P43243 847 aaKnown RBP eCLIP17.69■□□□□ 0.42
CAPN13-203ENST00000458085 CLCN3P51790 818 aa17.69■□□□□ 0.42
CAPN13-203ENST00000458085 PSMD6Q15008 389 aa17.69■□□□□ 0.42
CAPN13-203ENST00000458085 C15orf39Q6ZRI6 1047 aa17.69■□□□□ 0.42
CAPN13-203ENST00000458085 DPP9Q86TI2 863 aa17.69■□□□□ 0.42
CAPN13-203ENST00000458085 CREG2Q8IUH2 290 aa17.69■□□□□ 0.42
CAPN13-203ENST00000458085 AFG1LQ8WV93 481 aa17.69■□□□□ 0.42
CAPN13-203ENST00000458085 MAML3Q96JK9 1138 aa17.69■□□□□ 0.42
CAPN13-203ENST00000458085 OSBPL9Q96SU4 736 aa17.69■□□□□ 0.42
CAPN13-203ENST00000458085 MSTO1Q9BUK6 570 aa17.69■□□□□ 0.42
CAPN13-203ENST00000458085 PARD6BQ9BYG5 372 aa17.69■□□□□ 0.42
CAPN13-203ENST00000458085 PACSIN2Q9UNF0 486 aaPredicted RBP17.69■□□□□ 0.42
CAPN13-203ENST00000458085 PCDHGC5Q9Y5F6 944 aa17.69■□□□□ 0.42
CAPN13-203ENST00000458085 RBM47A0AV96 593 aaKnown RBP17.68■□□□□ 0.42
CAPN13-203ENST00000458085 RRP9O43818 475 aaKnown RBP17.68■□□□□ 0.42
CAPN13-203ENST00000458085 ITGBL1O95965 494 aaPredicted RBP17.68■□□□□ 0.42
CAPN13-203ENST00000458085 LGALS2P05162 132 aa17.68■□□□□ 0.42
CAPN13-203ENST00000458085 ZNF286BP0CG31 522 aa17.68■□□□□ 0.42
CAPN13-203ENST00000458085 GTF2H1P32780 548 aa17.68■□□□□ 0.42
CAPN13-203ENST00000458085 USP8P40818 1118 aa17.68■□□□□ 0.42
CAPN13-203ENST00000458085 GALCP54803 685 aa17.68■□□□□ 0.42
CAPN13-203ENST00000458085 HUNKP57058 714 aa17.68■□□□□ 0.42
CAPN13-203ENST00000458085 PRPF4BQ13523 1007 aaKnown RBP17.68■□□□□ 0.42
CAPN13-203ENST00000458085 FAM110CQ1W6H9 321 aa17.68■□□□□ 0.42
CAPN13-203ENST00000458085 CDCA2Q69YH5 1023 aaPredicted RBP17.68■□□□□ 0.42
CAPN13-203ENST00000458085 RHPN2Q8IUC4 686 aa17.68■□□□□ 0.42
CAPN13-203ENST00000458085 NPLOC4Q8TAT6 608 aa17.68■□□□□ 0.42
CAPN13-203ENST00000458085 PDCL3Q9H2J4 239 aa17.68■□□□□ 0.42
CAPN13-203ENST00000458085 SMARCAL1Q9NZC9 954 aa17.68■□□□□ 0.42
CAPN13-203ENST00000458085 EHD2Q9NZN4 543 aa17.68■□□□□ 0.42
CAPN13-203ENST00000458085 SUCLA2Q9P2R7 463 aaPredicted RBP17.68■□□□□ 0.42
CAPN13-203ENST00000458085 CPA4Q9UI42 421 aa17.68■□□□□ 0.42
CAPN13-203ENST00000458085 PPME1Q9Y570 386 aa17.68■□□□□ 0.42
CAPN13-203ENST00000458085 BTNL10A8MVZ5 291 aa17.68■□□□□ 0.42
CAPN13-203ENST00000458085 HBP1O60381 514 aa17.68■□□□□ 0.42
CAPN13-203ENST00000458085 SGPL1O95470 568 aa17.68■□□□□ 0.42
CAPN13-203ENST00000458085 GH1P01241 217 aa17.68■□□□□ 0.42
CAPN13-203ENST00000458085 H2AFZP0C0S5 128 aa17.68■□□□□ 0.42
CAPN13-203ENST00000458085 IGBP1P78318 339 aa17.68■□□□□ 0.42
CAPN13-203ENST00000458085 CLDN10P78369 228 aa17.68■□□□□ 0.42
CAPN13-203ENST00000458085 LAMC2Q13753 1193 aa17.68■□□□□ 0.42
CAPN13-203ENST00000458085 SCARA3Q6AZY7 606 aa17.68■□□□□ 0.42
CAPN13-203ENST00000458085 EFCAB12Q6NXP0 572 aa17.68■□□□□ 0.42
CAPN13-203ENST00000458085 H2AFVQ71UI9 128 aa17.68■□□□□ 0.42
CAPN13-203ENST00000458085 DHX38Q92620 1227 aaKnown RBP17.68■□□□□ 0.42
CAPN13-203ENST00000458085 KIAA1586Q9HCI6 787 aa17.68■□□□□ 0.42
CAPN13-203ENST00000458085 RBAKQ9NYW8 714 aaPredicted RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms