RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 TMEM105Q8N8V8 129 aa23.9■■□□□ 1.42
CPNE1-220ENST00000458038 KCNK12Q9HB15 430 aa23.9■■□□□ 1.42
CPNE1-220ENST00000458038 CHST7Q9NS84 486 aa23.9■■□□□ 1.42
CPNE1-220ENST00000458038 FAM86C1Q9NVL1 165 aa23.9■■□□□ 1.42
CPNE1-220ENST00000458038 VPS13AQ96RL7 3174 aa23.89■■□□□ 1.42
CPNE1-220ENST00000458038 CCDC195A0A1B0GUA6 201 aa23.89■■□□□ 1.41
CPNE1-220ENST00000458038 A0A1B0GUA9 196 aa23.89■■□□□ 1.41
CPNE1-220ENST00000458038 FAM205CA6NFA0 338 aa23.89■■□□□ 1.41
CPNE1-220ENST00000458038 EIF5BO60841 1220 aaKnown RBP23.89■■□□□ 1.41
CPNE1-220ENST00000458038 PAPLNO95428 1278 aa23.89■■□□□ 1.41
CPNE1-220ENST00000458038 SCNN1GP51170 649 aa23.89■■□□□ 1.41
CPNE1-220ENST00000458038 CREMQ03060 361 aa23.89■■□□□ 1.41
CPNE1-220ENST00000458038 TRIM29Q14134 588 aa23.89■■□□□ 1.41
CPNE1-220ENST00000458038 TAS1R1Q7RTX1 841 aa23.89■■□□□ 1.41
CPNE1-220ENST00000458038 ASAP3Q8TDY4 903 aa23.89■■□□□ 1.41
CPNE1-220ENST00000458038 GTF3C6Q969F1 213 aa23.89■■□□□ 1.41
CPNE1-220ENST00000458038 NXPE3Q969Y0 559 aa23.89■■□□□ 1.41
CPNE1-220ENST00000458038 PRIMPOLQ96LW4 560 aa23.89■■□□□ 1.41
CPNE1-220ENST00000458038 ZFP42Q96MM3 310 aa23.89■■□□□ 1.41
CPNE1-220ENST00000458038 SMOC2Q9H3U7 446 aa23.89■■□□□ 1.41
CPNE1-220ENST00000458038 WDR6Q9NNW5 1121 aaKnown RBP23.89■■□□□ 1.41
CPNE1-220ENST00000458038 FNIP2Q9P278 1114 aa23.89■■□□□ 1.41
CPNE1-220ENST00000458038 DUSP12Q9UNI6 340 aa23.89■■□□□ 1.41
CPNE1-220ENST00000458038 HES2Q9Y543 173 aa23.89■■□□□ 1.41
CPNE1-220ENST00000458038 PLXNA3P51805 1871 aa23.88■■□□□ 1.41
CPNE1-220ENST00000458038 GLRA2P23416 452 aa23.88■■□□□ 1.41
CPNE1-220ENST00000458038 TXKP42681 527 aa23.88■■□□□ 1.41
CPNE1-220ENST00000458038 GRIK3Q13003 919 aa23.88■■□□□ 1.41
CPNE1-220ENST00000458038 USP41Q3LFD5 358 aa23.88■■□□□ 1.41
CPNE1-220ENST00000458038 MCPH1Q8NEM0 835 aa23.88■■□□□ 1.41
CPNE1-220ENST00000458038 MTMR9Q96QG7 549 aa23.88■■□□□ 1.41
CPNE1-220ENST00000458038 MIOSQ9NXC5 875 aa23.88■■□□□ 1.41
CPNE1-220ENST00000458038 SPTBN4Q9H254 2564 aa23.87■■□□□ 1.41
CPNE1-220ENST00000458038 BTBD18B2RXH4 712 aa23.87■■□□□ 1.41
CPNE1-220ENST00000458038 NBL1P41271 181 aa23.87■■□□□ 1.41
CPNE1-220ENST00000458038 RTP3Q9BQQ7 232 aa23.87■■□□□ 1.41
CPNE1-220ENST00000458038 APOL6Q9BWW8 343 aa23.87■■□□□ 1.41
CPNE1-220ENST00000458038 NXF3Q9H4D5 531 aaKnown RBP23.87■■□□□ 1.41
CPNE1-220ENST00000458038 ZDHHC7Q9NXF8 308 aa23.87■■□□□ 1.41
CPNE1-220ENST00000458038 ADAM28Q9UKQ2 775 aa23.87■■□□□ 1.41
CPNE1-220ENST00000458038 DOCK8Q8NF50 2099 aa23.87■■□□□ 1.41
CPNE1-220ENST00000458038 ME3Q16798 604 aa23.86■■□□□ 1.41
CPNE1-220ENST00000458038 PPP4R3CPQ6ZMV5 832 aa23.86■■□□□ 1.41
CPNE1-220ENST00000458038 DIS3L2Q8IYB7 885 aaKnown RBP23.86■■□□□ 1.41
CPNE1-220ENST00000458038 NECAB1Q8N987 351 aa23.86■■□□□ 1.41
CPNE1-220ENST00000458038 PIGOQ8TEQ8 1089 aa23.86■■□□□ 1.41
CPNE1-220ENST00000458038 POLR3FQ9H1D9 316 aaPredicted RBP23.86■■□□□ 1.41
CPNE1-220ENST00000458038 TUFT1Q9NNX1 390 aa23.86■■□□□ 1.41
CPNE1-220ENST00000458038 PRMT7Q9NVM4 692 aaPredicted RBP23.86■■□□□ 1.41
CPNE1-220ENST00000458038 EPS15L1Q9UBC2 864 aa23.86■■□□□ 1.41
CPNE1-220ENST00000458038 FBXL21Q9UKT6 434 aa23.86■■□□□ 1.41
CPNE1-220ENST00000458038 CLUHO75153 1309 aa23.85■■□□□ 1.41
CPNE1-220ENST00000458038 AOC1P19801 751 aa23.85■■□□□ 1.41
CPNE1-220ENST00000458038 FAM187BQ17R55 369 aa23.85■■□□□ 1.41
CPNE1-220ENST00000458038 FUT10Q6P4F1 479 aa23.85■■□□□ 1.41
CPNE1-220ENST00000458038 NSUN7Q8NE18 718 aaKnown RBP23.85■■□□□ 1.41
CPNE1-220ENST00000458038 GSTCDQ8NEC7 633 aa23.85■■□□□ 1.41
CPNE1-220ENST00000458038 SMG7Q92540 1137 aaKnown RBP23.85■■□□□ 1.41
CPNE1-220ENST00000458038 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.85■■□□□ 1.41
CPNE1-220ENST00000458038 MYO15AQ9UKN7 3530 aa23.84■■□□□ 1.41
CPNE1-220ENST00000458038 WDR87Q6ZQQ6 2873 aa23.84■■□□□ 1.41
CPNE1-220ENST00000458038 NPTXRO95502 500 aa23.84■■□□□ 1.41
CPNE1-220ENST00000458038 AKAP5P24588 427 aa23.84■■□□□ 1.41
CPNE1-220ENST00000458038 GBP2P32456 591 aaPredicted RBP23.84■■□□□ 1.41
CPNE1-220ENST00000458038 ZBTB8OSQ8IWT0 167 aa23.84■■□□□ 1.41
CPNE1-220ENST00000458038 FLCNQ8NFG4 579 aa23.84■■□□□ 1.41
CPNE1-220ENST00000458038 FEZF2Q8TBJ5 459 aa23.84■■□□□ 1.41
CPNE1-220ENST00000458038 NACC1Q96RE7 527 aa23.84■■□□□ 1.41
CPNE1-220ENST00000458038 GPR62Q9BZJ7 368 aa23.84■■□□□ 1.41
CPNE1-220ENST00000458038 C2orf40Q9H1Z8 148 aa23.84■■□□□ 1.41
CPNE1-220ENST00000458038 WNT16Q9UBV4 365 aa23.84■■□□□ 1.41
CPNE1-220ENST00000458038 PARP2Q9UGN5 583 aa23.84■■□□□ 1.41
CPNE1-220ENST00000458038 LRRIQ4A6NIV6 560 aa23.83■■□□□ 1.41
CPNE1-220ENST00000458038 B4GALT5O43286 388 aa23.83■■□□□ 1.41
CPNE1-220ENST00000458038 USO1O60763 962 aaKnown RBP23.83■■□□□ 1.41
CPNE1-220ENST00000458038 DTNBO60941 627 aa23.83■■□□□ 1.41
CPNE1-220ENST00000458038 TADA2AO75478 443 aa23.83■■□□□ 1.41
CPNE1-220ENST00000458038 SAFBQ15424 915 aaKnown RBP eCLIP23.83■■□□□ 1.411e-17■■■■□ 20.2
CPNE1-220ENST00000458038 LILRA6Q6PI73 481 aa23.83■■□□□ 1.41
CPNE1-220ENST00000458038 POLR3CQ9BUI4 534 aaPredicted RBP23.83■■□□□ 1.41
CPNE1-220ENST00000458038 NT5C3AQ9H0P0 336 aa23.83■■□□□ 1.41
CPNE1-220ENST00000458038 FZD8Q9H461 694 aa23.83■■□□□ 1.41
CPNE1-220ENST00000458038 PIDD1Q9HB75 910 aa23.83■■□□□ 1.41
CPNE1-220ENST00000458038 SF3B1O75533 1304 aaKnown RBP eCLIP23.83■■□□□ 1.43e-7■■■■■ 90.2
CPNE1-220ENST00000458038 N4BP3O15049 544 aa23.82■■□□□ 1.4
CPNE1-220ENST00000458038 TGM5O43548 720 aa23.82■■□□□ 1.4
CPNE1-220ENST00000458038 N4BP1O75113 896 aaKnown RBP23.82■■□□□ 1.4
CPNE1-220ENST00000458038 RFPL2O75678 378 aa23.82■■□□□ 1.4
CPNE1-220ENST00000458038 SPATA31C1P0DKV0 1188 aa23.82■■□□□ 1.4
CPNE1-220ENST00000458038 ATP2B1P20020 1258 aa23.82■■□□□ 1.4
CPNE1-220ENST00000458038 ORC2Q13416 577 aaPredicted RBP23.82■■□□□ 1.4
CPNE1-220ENST00000458038 TUSC3Q13454 348 aa23.82■■□□□ 1.4
CPNE1-220ENST00000458038 HSP90AA2PQ14568 343 aaPredicted RBP23.82■■□□□ 1.4
CPNE1-220ENST00000458038 CDCA2Q69YH5 1023 aaPredicted RBP23.82■■□□□ 1.4
CPNE1-220ENST00000458038 CWF19L1Q69YN2 538 aaKnown RBP23.82■■□□□ 1.4
CPNE1-220ENST00000458038 PALB2Q86YC2 1186 aa23.82■■□□□ 1.4
CPNE1-220ENST00000458038 RIN2Q8WYP3 895 aaPredicted RBP23.82■■□□□ 1.4
CPNE1-220ENST00000458038 ZNF707Q96C28 371 aaPredicted RBP23.82■■□□□ 1.4
CPNE1-220ENST00000458038 PRKD2Q9BZL6 878 aa23.82■■□□□ 1.4
CPNE1-220ENST00000458038 ZFP37Q9Y6Q3 630 aaPredicted RBP23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms