RNA–Protein interactions for RNA: ENST00000455385.6

SYPL1-202, Transcript of synaptophysin like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYPL1, Length 2,151 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-202ENST00000455385 TMEM174Q8WUU8 243 aa11.74□□□□□ -0.53
SYPL1-202ENST00000455385 SAAL1Q96ER3 474 aa11.74□□□□□ -0.53
SYPL1-202ENST00000455385 RNF39Q9H2S5 420 aa11.74□□□□□ -0.53
SYPL1-202ENST00000455385 TSPY26PQ9H489 355 aa11.74□□□□□ -0.53
SYPL1-202ENST00000455385 IL23AQ9NPF7 189 aa11.74□□□□□ -0.53
SYPL1-202ENST00000455385 RGS18Q9NS28 235 aa11.74□□□□□ -0.53
SYPL1-202ENST00000455385 HSPBP1Q9NZL4 362 aa11.74□□□□□ -0.53
SYPL1-202ENST00000455385 HES2Q9Y543 173 aa11.74□□□□□ -0.53
SYPL1-202ENST00000455385 LTBP2Q14767 1821 aa11.73□□□□□ -0.53
SYPL1-202ENST00000455385 BICDL2A1A5D9 508 aa11.73□□□□□ -0.53
SYPL1-202ENST00000455385 TNFSF9P41273 254 aa11.73□□□□□ -0.53
SYPL1-202ENST00000455385 MATR3P43243 847 aaKnown RBP eCLIP11.73□□□□□ -0.53
SYPL1-202ENST00000455385 RGS19P49795 217 aa11.73□□□□□ -0.53
SYPL1-202ENST00000455385 CYP2J2P51589 502 aa11.73□□□□□ -0.53
SYPL1-202ENST00000455385 OSTNP61366 133 aa11.73□□□□□ -0.53
SYPL1-202ENST00000455385 NOLC1Q14978 699 aaKnown RBP eCLIP11.73□□□□□ -0.53
SYPL1-202ENST00000455385 NFIL3Q16649 462 aa11.73□□□□□ -0.53
SYPL1-202ENST00000455385 FOXR2Q6PJQ5 311 aa11.73□□□□□ -0.53
SYPL1-202ENST00000455385 SLC9A9Q8IVB4 645 aa11.73□□□□□ -0.53
SYPL1-202ENST00000455385 DHX40Q8IX18 779 aaKnown RBP11.73□□□□□ -0.53
SYPL1-202ENST00000455385 ZC3H3Q8IXZ2 948 aaKnown RBP11.73□□□□□ -0.53
SYPL1-202ENST00000455385 THNSL1Q8IYQ7 743 aa11.73□□□□□ -0.53
SYPL1-202ENST00000455385 RDH13Q8NBN7 331 aa11.73□□□□□ -0.53
SYPL1-202ENST00000455385 SMG8Q8ND04 991 aaKnown RBP11.73□□□□□ -0.53
SYPL1-202ENST00000455385 GOLGA5Q8TBA6 731 aa11.73□□□□□ -0.53
SYPL1-202ENST00000455385 ENOX1Q8TC92 643 aaKnown RBP11.73□□□□□ -0.53
SYPL1-202ENST00000455385 MSTO1Q9BUK6 570 aa11.73□□□□□ -0.53
SYPL1-202ENST00000455385 TSPYL2Q9H2G4 693 aaPredicted RBP11.73□□□□□ -0.53
SYPL1-202ENST00000455385 CBX8Q9HC52 389 aa11.73□□□□□ -0.53
SYPL1-202ENST00000455385 CGNQ9P2M7 1197 aaKnown RBP11.73□□□□□ -0.53
SYPL1-202ENST00000455385 AGO2Q9UKV8 859 aaKnown RBP11.73□□□□□ -0.53
SYPL1-202ENST00000455385 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.72□□□□□ -0.53
SYPL1-202ENST00000455385 MEIS3P2A8K0S8 358 aa11.72□□□□□ -0.53
SYPL1-202ENST00000455385 C9IYK1 514 aa11.72□□□□□ -0.53
SYPL1-202ENST00000455385 MEFVO15553 781 aaPredicted RBP11.72□□□□□ -0.53
SYPL1-202ENST00000455385 CAPN15O75808 1086 aa11.72□□□□□ -0.53
SYPL1-202ENST00000455385 MCF2P10911 925 aa11.72□□□□□ -0.53
SYPL1-202ENST00000455385 NR2F2P24468 414 aa11.72□□□□□ -0.53
SYPL1-202ENST00000455385 ACOT2P49753 483 aa11.72□□□□□ -0.53
SYPL1-202ENST00000455385 FAM189BP81408 668 aa11.72□□□□□ -0.53
SYPL1-202ENST00000455385 FKBP3Q00688 224 aaKnown RBP11.72□□□□□ -0.53
SYPL1-202ENST00000455385 FPGSQ05932 587 aa11.72□□□□□ -0.53
SYPL1-202ENST00000455385 CNKSR3Q6P9H4 555 aa11.72□□□□□ -0.53
SYPL1-202ENST00000455385 IRF2BP1Q8IU81 584 aa11.72□□□□□ -0.53
SYPL1-202ENST00000455385 RPUSD2Q8IZ73 545 aaKnown RBP11.72□□□□□ -0.53
SYPL1-202ENST00000455385 APBB2Q92870 758 aa11.72□□□□□ -0.53
SYPL1-202ENST00000455385 CCDC51Q96ER9 411 aa11.72□□□□□ -0.53
SYPL1-202ENST00000455385 FBXL18Q96ME1 805 aa11.72□□□□□ -0.53
SYPL1-202ENST00000455385 TSG101Q99816 390 aa11.72□□□□□ -0.53
SYPL1-202ENST00000455385 BPIFA3Q9BQP9 254 aa11.72□□□□□ -0.53
SYPL1-202ENST00000455385 TRAIPQ9BWF2 469 aa11.72□□□□□ -0.53
SYPL1-202ENST00000455385 SRRTQ9BXP5 876 aaKnown RBP11.72□□□□□ -0.53
SYPL1-202ENST00000455385 FTHL17Q9BXU8 183 aa11.72□□□□□ -0.53
SYPL1-202ENST00000455385 HSD3B7Q9H2F3 369 aa11.72□□□□□ -0.53
SYPL1-202ENST00000455385 NXF3Q9H4D5 531 aaKnown RBP11.72□□□□□ -0.53
SYPL1-202ENST00000455385 FAM105AQ9NUU6 356 aa11.72□□□□□ -0.53
SYPL1-202ENST00000455385 PCDHB2Q9Y5E7 798 aa11.72□□□□□ -0.53
SYPL1-202ENST00000455385 TNRC18O15417 2968 aaPredicted RBP11.72□□□□□ -0.53
SYPL1-202ENST00000455385 A0A0U1RQF3 1178 aa11.72□□□□□ -0.53
SYPL1-202ENST00000455385 OGTO15294 1046 aa11.72□□□□□ -0.53
SYPL1-202ENST00000455385 AKAP3O75969 853 aa11.72□□□□□ -0.53
SYPL1-202ENST00000455385 ATF7P17544 494 aaPredicted RBP11.72□□□□□ -0.53
SYPL1-202ENST00000455385 WNT7BP56706 349 aa11.72□□□□□ -0.53
SYPL1-202ENST00000455385 PPIGQ13427 754 aaKnown RBP eCLIP11.72□□□□□ -0.53
SYPL1-202ENST00000455385 MYBPC2Q14324 1141 aa11.72□□□□□ -0.53
SYPL1-202ENST00000455385 SPATA1Q5VX52 437 aa11.72□□□□□ -0.53
SYPL1-202ENST00000455385 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.72□□□□□ -0.532e-6■■□□□ 14.1
SYPL1-202ENST00000455385 ZNF365Q70YC5 407 aa11.72□□□□□ -0.53
SYPL1-202ENST00000455385 LUZP1Q86V48 1076 aa11.72□□□□□ -0.53
SYPL1-202ENST00000455385 CBWD2Q8IUF1 395 aa11.72□□□□□ -0.53
SYPL1-202ENST00000455385 CSGALNACT2Q8N6G5 542 aa11.72□□□□□ -0.53
SYPL1-202ENST00000455385 AOPEPQ8N6M6 819 aa11.72□□□□□ -0.53
SYPL1-202ENST00000455385 XXYLT1Q8NBI6 393 aa11.72□□□□□ -0.53
SYPL1-202ENST00000455385 ADPGKQ9BRR6 497 aa11.72□□□□□ -0.53
SYPL1-202ENST00000455385 FAM213AQ9BRX8 229 aa11.72□□□□□ -0.53
SYPL1-202ENST00000455385 NAT10Q9H0A0 1025 aaKnown RBP11.72□□□□□ -0.53
SYPL1-202ENST00000455385 CXCL16Q9H2A7 254 aa11.72□□□□□ -0.53
SYPL1-202ENST00000455385 SAMSN1Q9NSI8 373 aaKnown RBP11.72□□□□□ -0.53
SYPL1-202ENST00000455385 IPPQ9Y573 584 aa11.72□□□□□ -0.53
SYPL1-202ENST00000455385 NR2E3Q9Y5X4 410 aa11.72□□□□□ -0.53
SYPL1-202ENST00000455385 EXTL3O43909 919 aa11.71□□□□□ -0.53
SYPL1-202ENST00000455385 EXOC3O60645 756 aa11.71□□□□□ -0.53
SYPL1-202ENST00000455385 ZNF623O75123 536 aa11.71□□□□□ -0.53
SYPL1-202ENST00000455385 STAG3L1P0CL83 205 aa11.71□□□□□ -0.53
SYPL1-202ENST00000455385 IKBKEQ14164 716 aa11.71□□□□□ -0.53
SYPL1-202ENST00000455385 DCAF4L1Q3SXM0 396 aa11.71□□□□□ -0.53
SYPL1-202ENST00000455385 HSP90AA4PQ58FG1 418 aa11.71□□□□□ -0.53
SYPL1-202ENST00000455385 TMEM240Q5SV17 173 aa11.71□□□□□ -0.53
SYPL1-202ENST00000455385 SLC24A5Q71RS6 500 aa11.71□□□□□ -0.53
SYPL1-202ENST00000455385 MRPL10Q7Z7H8 261 aaKnown RBP11.71□□□□□ -0.53
SYPL1-202ENST00000455385 ECHDC2Q86YB7 292 aa11.71□□□□□ -0.53
SYPL1-202ENST00000455385 CRIPAKQ8N1N5 446 aa11.71□□□□□ -0.53
SYPL1-202ENST00000455385 GPD1LQ8N335 351 aa11.71□□□□□ -0.53
SYPL1-202ENST00000455385 NOC3LQ8WTT2 800 aaKnown RBP11.71□□□□□ -0.53
SYPL1-202ENST00000455385 LPPQ93052 612 aa11.71□□□□□ -0.53
SYPL1-202ENST00000455385 FANCLQ9NW38 375 aa11.71□□□□□ -0.53
SYPL1-202ENST00000455385 SNTG2Q9NY99 539 aa11.71□□□□□ -0.53
SYPL1-202ENST00000455385 CPSF3Q9UKF6 684 aaKnown RBP11.71□□□□□ -0.53
SYPL1-202ENST00000455385 NFE2L3Q9Y4A8 694 aa11.71□□□□□ -0.53
SYPL1-202ENST00000455385 TTC3P53804 2025 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms