RNA–Protein interactions for RNA: ENST00000455228.1

LINC01940-201, Transcript of long intergenic non-protein coding RNA 1940, humanhuman

TSL 2 BASIC

Gene LINC01940, Length 3,489 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01940-201ENST00000455228 CTTNBP2NLQ9P2B4 639 aa10.32□□□□□ -0.76
LINC01940-201ENST00000455228 DSEQ9UL01 958 aa10.32□□□□□ -0.76
LINC01940-201ENST00000455228 HEY1Q9Y5J3 304 aa10.32□□□□□ -0.76
LINC01940-201ENST00000455228 PAPPAQ13219 1627 aa10.32□□□□□ -0.76
LINC01940-201ENST00000455228 BCORQ6W2J9 1755 aa10.32□□□□□ -0.76
LINC01940-201ENST00000455228 USP17L3A6NCW0 530 aa10.32□□□□□ -0.76
LINC01940-201ENST00000455228 USP17L4A6NCW7 530 aa10.32□□□□□ -0.76
LINC01940-201ENST00000455228 SMCO2A6NFE2 343 aa10.32□□□□□ -0.76
LINC01940-201ENST00000455228 ASMTLO95671 621 aa10.32□□□□□ -0.76
LINC01940-201ENST00000455228 CYP1A1P04798 512 aaPredicted RBP10.32□□□□□ -0.76
LINC01940-201ENST00000455228 GNA11P29992 359 aa10.32□□□□□ -0.76
LINC01940-201ENST00000455228 P3H1Q32P28 736 aa10.32□□□□□ -0.76
LINC01940-201ENST00000455228 PDXDC1Q6P996 788 aa10.32□□□□□ -0.76
LINC01940-201ENST00000455228 AGMOQ6ZNB7 445 aa10.32□□□□□ -0.76
LINC01940-201ENST00000455228 USP17L1Q7RTZ2 530 aa10.32□□□□□ -0.76
LINC01940-201ENST00000455228 PIGWQ7Z7B1 504 aa10.32□□□□□ -0.76
LINC01940-201ENST00000455228 C11orf96Q7Z7L8 435 aa10.32□□□□□ -0.76
LINC01940-201ENST00000455228 OSTM1Q86WC4 334 aa10.32□□□□□ -0.76
LINC01940-201ENST00000455228 LILRB2Q8N423 598 aa10.32□□□□□ -0.76
LINC01940-201ENST00000455228 ARFGAP2Q8N6H7 521 aa10.32□□□□□ -0.76
LINC01940-201ENST00000455228 ZNF713Q8N859 430 aaPredicted RBP10.32□□□□□ -0.76
LINC01940-201ENST00000455228 CCDC63Q8NA47 563 aa10.32□□□□□ -0.76
LINC01940-201ENST00000455228 CCDC110Q8TBZ0 833 aa10.32□□□□□ -0.76
LINC01940-201ENST00000455228 FNDC8Q8TC99 324 aa10.32□□□□□ -0.76
LINC01940-201ENST00000455228 MAELQ96JY0 434 aaKnown RBP10.32□□□□□ -0.76
LINC01940-201ENST00000455228 FAM84BQ96KN1 310 aaPredicted RBP10.32□□□□□ -0.76
LINC01940-201ENST00000455228 ATP6V1G3Q96LB4 118 aa10.32□□□□□ -0.76
LINC01940-201ENST00000455228 PARVBQ9HBI1 364 aa10.32□□□□□ -0.76
LINC01940-201ENST00000455228 SEC63Q9UGP8 760 aaKnown RBP10.32□□□□□ -0.76
LINC01940-201ENST00000455228 PACSIN2Q9UNF0 486 aaPredicted RBP10.32□□□□□ -0.76
LINC01940-201ENST00000455228 E9PBE3 544 aa10.32□□□□□ -0.76
LINC01940-201ENST00000455228 GCOM1H8Y6P7 765 aaPredicted RBP10.32□□□□□ -0.76
LINC01940-201ENST00000455228 TRAF5O00463 557 aa10.32□□□□□ -0.76
LINC01940-201ENST00000455228 LCA5LO95447 670 aa10.32□□□□□ -0.76
LINC01940-201ENST00000455228 ADAMTS2O95450 1211 aa10.32□□□□□ -0.76
LINC01940-201ENST00000455228 MYZAPP0CAP1 466 aa10.32□□□□□ -0.76
LINC01940-201ENST00000455228 POTEJP0CG39 1038 aa10.32□□□□□ -0.76
LINC01940-201ENST00000455228 RAPGEF1Q13905 1077 aa10.32□□□□□ -0.76
LINC01940-201ENST00000455228 TMEM266Q2M3C6 531 aa10.32□□□□□ -0.76
LINC01940-201ENST00000455228 DENND2CQ68D51 928 aa10.32□□□□□ -0.76
LINC01940-201ENST00000455228 BBS5Q8N3I7 341 aa10.32□□□□□ -0.76
LINC01940-201ENST00000455228 ASAP3Q8TDY4 903 aa10.32□□□□□ -0.76
LINC01940-201ENST00000455228 VMP1Q96GC9 406 aa10.32□□□□□ -0.76
LINC01940-201ENST00000455228 C8orf48Q96LL4 319 aa10.32□□□□□ -0.76
LINC01940-201ENST00000455228 GDF3Q9NR23 364 aa10.32□□□□□ -0.76
LINC01940-201ENST00000455228 PLAAQ9Y263 795 aa10.32□□□□□ -0.76
LINC01940-201ENST00000455228 LRCH1Q9Y2L9 728 aa10.32□□□□□ -0.76
LINC01940-201ENST00000455228 NOX1Q9Y5S8 564 aa10.32□□□□□ -0.76
LINC01940-201ENST00000455228 FLT1P17948 1338 aa10.32□□□□□ -0.76
LINC01940-201ENST00000455228 SSU72P8A0A1W2PR75 194 aa10.31□□□□□ -0.76
LINC01940-201ENST00000455228 KLRF2D3W0D1 207 aa10.31□□□□□ -0.76
LINC01940-201ENST00000455228 PJA2O43164 708 aa10.31□□□□□ -0.76
LINC01940-201ENST00000455228 SSBP05455 408 aaKnown RBP eCLIP10.31□□□□□ -0.76
LINC01940-201ENST00000455228 HNRNPCP07910 306 aaKnown RBP eCLIP10.31□□□□□ -0.76
LINC01940-201ENST00000455228 PRDX5P30044 214 aa10.31□□□□□ -0.76
LINC01940-201ENST00000455228 RFC5P40937 340 aa10.31□□□□□ -0.76
LINC01940-201ENST00000455228 POLR2FP61218 127 aaKnown RBP10.31□□□□□ -0.76
LINC01940-201ENST00000455228 LRRC63Q05C16 580 aa10.31□□□□□ -0.76
LINC01940-201ENST00000455228 ITGA9Q13797 1035 aa10.31□□□□□ -0.76
LINC01940-201ENST00000455228 GRM4Q14833 912 aa10.31□□□□□ -0.76
LINC01940-201ENST00000455228 LRRC41Q15345 812 aa10.31□□□□□ -0.76
LINC01940-201ENST00000455228 CRY1Q16526 586 aa10.31□□□□□ -0.76
LINC01940-201ENST00000455228 SIGIRRQ6IA17 410 aa10.31□□□□□ -0.76
LINC01940-201ENST00000455228 UNC13DQ70J99 1090 aa10.31□□□□□ -0.76
LINC01940-201ENST00000455228 BRINP3Q76B58 766 aa10.31□□□□□ -0.76
LINC01940-201ENST00000455228 DDX42Q86XP3 938 aaKnown RBP eCLIP10.31□□□□□ -0.76
LINC01940-201ENST00000455228 ZNF384Q8TF68 577 aa10.31□□□□□ -0.76
LINC01940-201ENST00000455228 LARP4BQ92615 738 aaKnown RBP10.31□□□□□ -0.76
LINC01940-201ENST00000455228 DYNLL2Q96FJ2 89 aa10.31□□□□□ -0.76
LINC01940-201ENST00000455228 HIC2Q96JB3 615 aa10.31□□□□□ -0.76
LINC01940-201ENST00000455228 C1orf74Q96LT6 269 aa10.31□□□□□ -0.76
LINC01940-201ENST00000455228 KLHL4Q9C0H6 718 aa10.31□□□□□ -0.76
LINC01940-201ENST00000455228 CPVLQ9H3G5 476 aa10.31□□□□□ -0.76
LINC01940-201ENST00000455228 TFCP2L1Q9NZI6 479 aa10.31□□□□□ -0.76
LINC01940-201ENST00000455228 ECE2O60344 883 aa10.31□□□□□ -0.76
LINC01940-201ENST00000455228 SPATA31D3P0C874 917 aa10.31□□□□□ -0.76
LINC01940-201ENST00000455228 NAGAP17050 411 aa10.31□□□□□ -0.76
LINC01940-201ENST00000455228 CSTF2P33240 577 aaKnown RBP eCLIP10.31□□□□□ -0.76
LINC01940-201ENST00000455228 LAPTM5Q13571 262 aa10.31□□□□□ -0.76
LINC01940-201ENST00000455228 MTMR3Q13615 1198 aa10.31□□□□□ -0.76
LINC01940-201ENST00000455228 SPATA31D4Q6ZUB0 917 aa10.31□□□□□ -0.76
LINC01940-201ENST00000455228 DCLK2Q8N568 766 aa10.31□□□□□ -0.76
LINC01940-201ENST00000455228 DAGLBQ8NCG7 672 aa10.31□□□□□ -0.76
LINC01940-201ENST00000455228 PTCD2Q8WV60 388 aaKnown RBP10.31□□□□□ -0.76
LINC01940-201ENST00000455228 STARD8Q92502 1023 aa10.31□□□□□ -0.76
LINC01940-201ENST00000455228 RAB34Q9BZG1 259 aa10.31□□□□□ -0.76
LINC01940-201ENST00000455228 MAD2L2Q9UI95 211 aa10.31□□□□□ -0.76
LINC01940-201ENST00000455228 LNPEPQ9UIQ6 1025 aa10.31□□□□□ -0.76
LINC01940-201ENST00000455228 KIAA1257Q9ULG3 409 aa10.31□□□□□ -0.76
LINC01940-201ENST00000455228 NUP98P52948 1817 aa10.31□□□□□ -0.76
LINC01940-201ENST00000455228 MYMKA6NI61 221 aa10.31□□□□□ -0.76
LINC01940-201ENST00000455228 M0R2N6 131 aa10.31□□□□□ -0.76
LINC01940-201ENST00000455228 ZBED1O96006 694 aa10.31□□□□□ -0.76
LINC01940-201ENST00000455228 SERPING1P05155 500 aa10.31□□□□□ -0.76
LINC01940-201ENST00000455228 ALAS1P13196 640 aa10.31□□□□□ -0.76
LINC01940-201ENST00000455228 CD9P21926 228 aa10.31□□□□□ -0.76
LINC01940-201ENST00000455228 OCRLQ01968 901 aa10.31□□□□□ -0.76
LINC01940-201ENST00000455228 GUF1Q8N442 669 aaKnown RBP10.31□□□□□ -0.76
LINC01940-201ENST00000455228 GOLM1Q8NBJ4 401 aa10.31□□□□□ -0.76
LINC01940-201ENST00000455228 TBCKQ8TEA7 893 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms