RNA–Protein interactions for RNA: ENST00000454968.5

LINC00963-208, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best) BASIC

Gene LINC00963, Length 1,403 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-208ENST00000454968 GINS2Q9Y248 185 aa18.17■□□□□ 0.5
LINC00963-208ENST00000454968 FRMD4BQ9Y2L6 1034 aa18.17■□□□□ 0.5
LINC00963-208ENST00000454968 N4BP3O15049 544 aa18.16■□□□□ 0.5
LINC00963-208ENST00000454968 OGTO15294 1046 aa18.16■□□□□ 0.5
LINC00963-208ENST00000454968 TLR3O15455 904 aaKnown RBP18.16■□□□□ 0.5
LINC00963-208ENST00000454968 CDK11BP21127 795 aaKnown RBP18.16■□□□□ 0.5
LINC00963-208ENST00000454968 COPB1P53618 953 aaKnown RBP18.16■□□□□ 0.5
LINC00963-208ENST00000454968 CLDN10P78369 228 aa18.16■□□□□ 0.5
LINC00963-208ENST00000454968 PPP2R3AQ06190 1150 aa18.16■□□□□ 0.5
LINC00963-208ENST00000454968 BFSP2Q13515 415 aa18.16■□□□□ 0.5
LINC00963-208ENST00000454968 LPIN1Q14693 890 aa18.16■□□□□ 0.5
LINC00963-208ENST00000454968 SNRNP35Q16560 246 aaKnown RBP18.16■□□□□ 0.5
LINC00963-208ENST00000454968 MAN2A1Q16706 1144 aa18.16■□□□□ 0.5
LINC00963-208ENST00000454968 CEP135Q66GS9 1140 aa18.16■□□□□ 0.5
LINC00963-208ENST00000454968 INTS8Q75QN2 995 aaKnown RBP18.16■□□□□ 0.5
LINC00963-208ENST00000454968 CATSPER4Q7RTX7 472 aa18.16■□□□□ 0.5
LINC00963-208ENST00000454968 NECAB2Q7Z6G3 386 aa18.16■□□□□ 0.5
LINC00963-208ENST00000454968 FAM186BQ8IYM0 893 aa18.16■□□□□ 0.5
LINC00963-208ENST00000454968 CCDC155Q8N6L0 562 aa18.16■□□□□ 0.5
LINC00963-208ENST00000454968 TRAIPQ9BWF2 469 aa18.16■□□□□ 0.5
LINC00963-208ENST00000454968 OSBPL7Q9BZF2 842 aa18.16■□□□□ 0.5
LINC00963-208ENST00000454968 AGO3Q9H9G7 860 aaKnown RBP18.16■□□□□ 0.5
LINC00963-208ENST00000454968 CHST12Q9NRB3 414 aa18.16■□□□□ 0.5
LINC00963-208ENST00000454968 MAGEC2Q9UBF1 373 aaPredicted RBP18.16■□□□□ 0.5
LINC00963-208ENST00000454968 ARMCX3Q9UH62 379 aaPredicted RBP18.16■□□□□ 0.5
LINC00963-208ENST00000454968 TBX21Q9UL17 535 aa18.16■□□□□ 0.5
LINC00963-208ENST00000454968 PDCD11Q14690 1871 aaKnown RBP18.16■□□□□ 0.5
LINC00963-208ENST00000454968 TRIP11Q15643 1979 aa18.15■□□□□ 0.5
LINC00963-208ENST00000454968 ADRB2P07550 413 aa18.15■□□□□ 0.5
LINC00963-208ENST00000454968 CTSHP09668 335 aa18.15■□□□□ 0.5
LINC00963-208ENST00000454968 PRKCSHP14314 528 aaPredicted RBP18.15■□□□□ 0.5
LINC00963-208ENST00000454968 SELPP16109 830 aa18.15■□□□□ 0.5
LINC00963-208ENST00000454968 FGFR4P22455 802 aa18.15■□□□□ 0.5
LINC00963-208ENST00000454968 PBX1P40424 430 aa18.15■□□□□ 0.5
LINC00963-208ENST00000454968 TLE2Q04725 743 aa18.15■□□□□ 0.5
LINC00963-208ENST00000454968 GPNMBQ14956 572 aa18.15■□□□□ 0.5
LINC00963-208ENST00000454968 TRIM60Q495X7 471 aa18.15■□□□□ 0.5
LINC00963-208ENST00000454968 NOTUMQ6P988 496 aa18.15■□□□□ 0.5
LINC00963-208ENST00000454968 CBWD2Q8IUF1 395 aa18.15■□□□□ 0.5
LINC00963-208ENST00000454968 ANKRD20A12PQ8NF67 263 aa18.15■□□□□ 0.5
LINC00963-208ENST00000454968 SLC35C1Q96A29 364 aa18.15■□□□□ 0.5
LINC00963-208ENST00000454968 MSTO1Q9BUK6 570 aa18.15■□□□□ 0.5
LINC00963-208ENST00000454968 NOC4LQ9BVI4 516 aaKnown RBP18.15■□□□□ 0.5
LINC00963-208ENST00000454968 ANKFY1Q9P2R3 1169 aa18.15■□□□□ 0.5
LINC00963-208ENST00000454968 CPSF3Q9UKF6 684 aaKnown RBP18.15■□□□□ 0.5
LINC00963-208ENST00000454968 TET1Q8NFU7 2136 aa18.15■□□□□ 0.5
LINC00963-208ENST00000454968 LGALS16A8MUM7 142 aa18.15■□□□□ 0.5
LINC00963-208ENST00000454968 GPR182O15218 404 aa18.15■□□□□ 0.5
LINC00963-208ENST00000454968 PQBP1O60828 265 aaKnown RBP18.15■□□□□ 0.5
LINC00963-208ENST00000454968 RPS6KA5O75582 802 aa18.15■□□□□ 0.5
LINC00963-208ENST00000454968 ZNF75DP51815 510 aa18.15■□□□□ 0.5
LINC00963-208ENST00000454968 ATN1P54259 1190 aaPredicted RBP18.15■□□□□ 0.5
LINC00963-208ENST00000454968 UBASH3AP57075 661 aa18.15■□□□□ 0.5
LINC00963-208ENST00000454968 NCBP1Q09161 790 aaKnown RBP18.15■□□□□ 0.5
LINC00963-208ENST00000454968 BFSP1Q12934 665 aa18.15■□□□□ 0.5
LINC00963-208ENST00000454968 KYAT1Q16773 422 aa18.15■□□□□ 0.5
LINC00963-208ENST00000454968 DCAF4L1Q3SXM0 396 aa18.15■□□□□ 0.5
LINC00963-208ENST00000454968 ZNF568Q3ZCX4 644 aa18.15■□□□□ 0.5
LINC00963-208ENST00000454968 C1orf220Q5T0J3 134 aa18.15■□□□□ 0.5
LINC00963-208ENST00000454968 UBXN11Q5T124 520 aa18.15■□□□□ 0.5
LINC00963-208ENST00000454968 SLC27A1Q6PCB7 646 aa18.15■□□□□ 0.5
LINC00963-208ENST00000454968 LRRC8DQ7L1W4 858 aa18.15■□□□□ 0.5
LINC00963-208ENST00000454968 PLEKHO2Q8TD55 490 aa18.15■□□□□ 0.5
LINC00963-208ENST00000454968 TMC2Q8TDI7 906 aa18.15■□□□□ 0.5
LINC00963-208ENST00000454968 SAAL1Q96ER3 474 aa18.15■□□□□ 0.5
LINC00963-208ENST00000454968 CPB2Q96IY4 423 aa18.15■□□□□ 0.5
LINC00963-208ENST00000454968 PDLIM2Q96JY6 352 aa18.15■□□□□ 0.5
LINC00963-208ENST00000454968 XPO4Q9C0E2 1151 aaKnown RBP18.15■□□□□ 0.5
LINC00963-208ENST00000454968 IFNKQ9P0W0 207 aa18.15■□□□□ 0.5
LINC00963-208ENST00000454968 ST3GAL5Q9UNP4 418 aa18.15■□□□□ 0.5
LINC00963-208ENST00000454968 SCN5AQ14524 2016 aa18.14■□□□□ 0.49
LINC00963-208ENST00000454968 ZNF233A6NK53 670 aa18.14■□□□□ 0.49
LINC00963-208ENST00000454968 DCDC2CA8MYV0 355 aa18.14■□□□□ 0.49
LINC00963-208ENST00000454968 PMM2O15305 246 aa18.14■□□□□ 0.49
LINC00963-208ENST00000454968 SERPINC1P01008 464 aa18.14■□□□□ 0.49
LINC00963-208ENST00000454968 CYP24A1Q07973 514 aa18.14■□□□□ 0.49
LINC00963-208ENST00000454968 DSC3Q14574 896 aa18.14■□□□□ 0.49
LINC00963-208ENST00000454968 LRRC26Q2I0M4 334 aa18.14■□□□□ 0.49
LINC00963-208ENST00000454968 CCDC40Q4G0X9 1142 aa18.14■□□□□ 0.49
LINC00963-208ENST00000454968 VWA3BQ502W6 1294 aa18.14■□□□□ 0.49
LINC00963-208ENST00000454968 ZBTB41Q5SVQ8 909 aa18.14■□□□□ 0.49
LINC00963-208ENST00000454968 BRSK2Q8IWQ3 736 aa18.14■□□□□ 0.49
LINC00963-208ENST00000454968 PARD3BQ8TEW8 1205 aa18.14■□□□□ 0.49
LINC00963-208ENST00000454968 FAM213AQ9BRX8 229 aa18.14■□□□□ 0.49
LINC00963-208ENST00000454968 TAB2Q9NYJ8 693 aa18.14■□□□□ 0.49
LINC00963-208ENST00000454968 PADI3Q9ULW8 664 aa18.14■□□□□ 0.49
LINC00963-208ENST00000454968 GOLGA8IPA6NC78 632 aa18.13■□□□□ 0.49
LINC00963-208ENST00000454968 GOLGA8JA6NMD2 632 aa18.13■□□□□ 0.49
LINC00963-208ENST00000454968 CBFA2T2O43439 604 aa18.13■□□□□ 0.49
LINC00963-208ENST00000454968 PARNO95453 639 aaKnown RBP18.13■□□□□ 0.49
LINC00963-208ENST00000454968 ADCY5O95622 1261 aa18.13■□□□□ 0.49
LINC00963-208ENST00000454968 CDC25BP30305 580 aa18.13■□□□□ 0.49
LINC00963-208ENST00000454968 GRM5P41594 1212 aa18.13■□□□□ 0.49
LINC00963-208ENST00000454968 MTIF2P46199 727 aaKnown RBP18.13■□□□□ 0.49
LINC00963-208ENST00000454968 PSMD6Q15008 389 aa18.13■□□□□ 0.49
LINC00963-208ENST00000454968 TCHPQ9BT92 498 aa18.13■□□□□ 0.49
LINC00963-208ENST00000454968 TRIM5Q9C035 493 aa18.13■□□□□ 0.49
LINC00963-208ENST00000454968 TMX1Q9H3N1 280 aa18.13■□□□□ 0.49
LINC00963-208ENST00000454968 NDST4Q9H3R1 872 aa18.13■□□□□ 0.49
LINC00963-208ENST00000454968 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms