RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 PRG3Q9Y2Y8 225 aaPredicted RBP11.78□□□□□ -0.52
DDX39A-203ENST00000454233 HCFC2Q9Y5Z7 792 aa11.78□□□□□ -0.52
DDX39A-203ENST00000454233 IRAK3Q9Y616 596 aa11.78□□□□□ -0.52
DDX39A-203ENST00000454233 XIRP2A4UGR9 3374 aa11.78□□□□□ -0.52
DDX39A-203ENST00000454233 PHLPP2Q6ZVD8 1323 aa11.78□□□□□ -0.52
DDX39A-203ENST00000454233 K7ERI5 159 aa11.77□□□□□ -0.53
DDX39A-203ENST00000454233 HIP1RO75146 1068 aa11.77□□□□□ -0.53
DDX39A-203ENST00000454233 URODP06132 367 aa11.77□□□□□ -0.53
DDX39A-203ENST00000454233 PEX3P56589 373 aa11.77□□□□□ -0.53
DDX39A-203ENST00000454233 DSC1Q08554 894 aa11.77□□□□□ -0.53
DDX39A-203ENST00000454233 GRIK3Q13003 919 aa11.77□□□□□ -0.53
DDX39A-203ENST00000454233 DMP1Q13316 513 aaPredicted RBP11.77□□□□□ -0.53
DDX39A-203ENST00000454233 DCAF4L1Q3SXM0 396 aa11.77□□□□□ -0.53
DDX39A-203ENST00000454233 TMEM31Q5JXX7 168 aa11.77□□□□□ -0.53
DDX39A-203ENST00000454233 HYIQ5T013 277 aa11.77□□□□□ -0.53
DDX39A-203ENST00000454233 RINT1Q6NUQ1 792 aa11.77□□□□□ -0.53
DDX39A-203ENST00000454233 KCNK18Q7Z418 384 aa11.77□□□□□ -0.53
DDX39A-203ENST00000454233 PPFIBP1Q86W92 1011 aa11.77□□□□□ -0.53
DDX39A-203ENST00000454233 KHSRPQ92945 711 aaKnown RBP eCLIP11.77□□□□□ -0.53
DDX39A-203ENST00000454233 AK8Q96MA6 479 aa11.77□□□□□ -0.53
DDX39A-203ENST00000454233 KIFC3Q9BVG8 833 aa11.77□□□□□ -0.53
DDX39A-203ENST00000454233 APOL5Q9BWW9 433 aa11.77□□□□□ -0.53
DDX39A-203ENST00000454233 PHF7Q9BWX1 381 aaPredicted RBP11.77□□□□□ -0.53
DDX39A-203ENST00000454233 C17orf75Q9HAS0 396 aa11.77□□□□□ -0.53
DDX39A-203ENST00000454233 MRPL17Q9NRX2 175 aaKnown RBP11.77□□□□□ -0.53
DDX39A-203ENST00000454233 DZANK1Q9NVP4 752 aa11.77□□□□□ -0.53
DDX39A-203ENST00000454233 MIOSQ9NXC5 875 aa11.77□□□□□ -0.53
DDX39A-203ENST00000454233 KCNG1Q9UIX4 513 aa11.77□□□□□ -0.53
DDX39A-203ENST00000454233 SSX2IPQ9Y2D8 614 aa11.77□□□□□ -0.53
DDX39A-203ENST00000454233 SPTBN5Q9NRC6 3674 aaKnown RBP11.77□□□□□ -0.53
DDX39A-203ENST00000454233 TTLL13PA6NNM8 815 aa11.76□□□□□ -0.53
DDX39A-203ENST00000454233 SLC26A4O43511 780 aa11.76□□□□□ -0.53
DDX39A-203ENST00000454233 DCXO43602 365 aa11.76□□□□□ -0.53
DDX39A-203ENST00000454233 SOD2P04179 222 aa11.76□□□□□ -0.53
DDX39A-203ENST00000454233 UBA7P41226 1012 aa11.76□□□□□ -0.53
DDX39A-203ENST00000454233 NPTX2P47972 431 aa11.76□□□□□ -0.53
DDX39A-203ENST00000454233 CBX2Q14781 532 aaPredicted RBP11.76□□□□□ -0.53
DDX39A-203ENST00000454233 PTPN14Q15678 1187 aa11.76□□□□□ -0.53
DDX39A-203ENST00000454233 ATF7IP2Q5U623 682 aa11.76□□□□□ -0.53
DDX39A-203ENST00000454233 CES5AQ6NT32 575 aa11.76□□□□□ -0.53
DDX39A-203ENST00000454233 SYCE2Q6PIF2 218 aa11.76□□□□□ -0.53
DDX39A-203ENST00000454233 C1orf186Q6ZWK4 172 aa11.76□□□□□ -0.53
DDX39A-203ENST00000454233 CABP7Q86V35 215 aa11.76□□□□□ -0.53
DDX39A-203ENST00000454233 RASSF8Q8NHQ8 419 aa11.76□□□□□ -0.53
DDX39A-203ENST00000454233 SUSD6Q92537 303 aa11.76□□□□□ -0.53
DDX39A-203ENST00000454233 CALML4Q96GE6 196 aa11.76□□□□□ -0.53
DDX39A-203ENST00000454233 PNMA5Q96PV4 448 aa11.76□□□□□ -0.53
DDX39A-203ENST00000454233 PLIN2Q99541 437 aa11.76□□□□□ -0.53
DDX39A-203ENST00000454233 RUSC1Q9BVN2 902 aa11.76□□□□□ -0.53
DDX39A-203ENST00000454233 HERC2P3Q9BVR0 1158 aa11.76□□□□□ -0.53
DDX39A-203ENST00000454233 VN1R3Q9BXE9 311 aa11.76□□□□□ -0.53
DDX39A-203ENST00000454233 S1PR5Q9H228 398 aa11.76□□□□□ -0.53
DDX39A-203ENST00000454233 TMEM134Q9H6X4 195 aa11.76□□□□□ -0.53
DDX39A-203ENST00000454233 KMT5AQ9NQR1 393 aa11.76□□□□□ -0.53
DDX39A-203ENST00000454233 MARCH5Q9NX47 278 aa11.76□□□□□ -0.53
DDX39A-203ENST00000454233 SNTG2Q9NY99 539 aa11.76□□□□□ -0.53
DDX39A-203ENST00000454233 KCND2Q9NZV8 630 aa11.76□□□□□ -0.53
DDX39A-203ENST00000454233 USP20Q9Y2K6 914 aa11.76□□□□□ -0.53
DDX39A-203ENST00000454233 RBM19Q9Y4C8 960 aaKnown RBP11.76□□□□□ -0.53
DDX39A-203ENST00000454233 TDRD15B5MCY1 1934 aaKnown RBP11.76□□□□□ -0.53
DDX39A-203ENST00000454233 SPDYE4A6NLX3 237 aa11.75□□□□□ -0.53
DDX39A-203ENST00000454233 RECQL4O94761 1208 aa11.75□□□□□ -0.53
DDX39A-203ENST00000454233 THP07101 528 aa11.75□□□□□ -0.53
DDX39A-203ENST00000454233 PLA2G4BP0C869 781 aa11.75□□□□□ -0.53
DDX39A-203ENST00000454233 COL9A1P20849 921 aa11.75□□□□□ -0.53
DDX39A-203ENST00000454233 GUCY2CP25092 1073 aa11.75□□□□□ -0.53
DDX39A-203ENST00000454233 KLRC2P26717 231 aa11.75□□□□□ -0.53
DDX39A-203ENST00000454233 LONP1P36776 959 aaKnown RBP11.75□□□□□ -0.53
DDX39A-203ENST00000454233 GLUD2P49448 558 aa11.75□□□□□ -0.53
DDX39A-203ENST00000454233 ITIH3Q06033 890 aa11.75□□□□□ -0.53
DDX39A-203ENST00000454233 SF3A1Q15459 793 aaKnown RBP11.75□□□□□ -0.53
DDX39A-203ENST00000454233 NT5DC1Q5TFE4 455 aa11.75□□□□□ -0.53
DDX39A-203ENST00000454233 EEF1DP3Q658K8 133 aa11.75□□□□□ -0.53
DDX39A-203ENST00000454233 KIAA1841Q6NSI8 718 aa11.75□□□□□ -0.53
DDX39A-203ENST00000454233 DAW1Q8N136 415 aa11.75□□□□□ -0.53
DDX39A-203ENST00000454233 SYT2Q8N9I0 419 aaPredicted RBP11.75□□□□□ -0.53
DDX39A-203ENST00000454233 GSTCDQ8NEC7 633 aa11.75□□□□□ -0.53
DDX39A-203ENST00000454233 INTS4Q96HW7 963 aaKnown RBP11.75□□□□□ -0.53
DDX39A-203ENST00000454233 RPGRIP1Q96KN7 1286 aa11.75□□□□□ -0.53
DDX39A-203ENST00000454233 KLHL5Q96PQ7 755 aa11.75□□□□□ -0.53
DDX39A-203ENST00000454233 MRPL4Q9BYD3 311 aaKnown RBP11.75□□□□□ -0.53
DDX39A-203ENST00000454233 TNFSF13BQ9Y275 285 aa11.75□□□□□ -0.53
DDX39A-203ENST00000454233 GDAQ9Y2T3 454 aa11.75□□□□□ -0.53
DDX39A-203ENST00000454233 LOC730098B7Z3J9 87 aa11.74□□□□□ -0.53
DDX39A-203ENST00000454233 K7ELQ4 463 aaPredicted RBP11.74□□□□□ -0.53
DDX39A-203ENST00000454233 C2CD2LO14523 706 aa11.74□□□□□ -0.53
DDX39A-203ENST00000454233 GPR37L1O60883 481 aa11.74□□□□□ -0.53
DDX39A-203ENST00000454233 TADA2AO75478 443 aa11.74□□□□□ -0.53
DDX39A-203ENST00000454233 EDN1P05305 212 aa11.74□□□□□ -0.53
DDX39A-203ENST00000454233 ADH1AP07327 375 aa11.74□□□□□ -0.53
DDX39A-203ENST00000454233 CNPP09543 421 aaKnown RBP11.74□□□□□ -0.53
DDX39A-203ENST00000454233 EPCAMP16422 314 aa11.74□□□□□ -0.53
DDX39A-203ENST00000454233 MTHFRP42898 656 aa11.74□□□□□ -0.53
DDX39A-203ENST00000454233 SMTNP53814 917 aa11.74□□□□□ -0.53
DDX39A-203ENST00000454233 RAD51AP2Q09MP3 1159 aa11.74□□□□□ -0.53
DDX39A-203ENST00000454233 STRN3Q13033 797 aa11.74□□□□□ -0.53
DDX39A-203ENST00000454233 MAPK7Q13164 816 aa11.74□□□□□ -0.53
DDX39A-203ENST00000454233 TUSC3Q13454 348 aa11.74□□□□□ -0.53
DDX39A-203ENST00000454233 TMEM119Q4V9L6 283 aa11.74□□□□□ -0.53
DDX39A-203ENST00000454233 RARS2Q5T160 578 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms