RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 CROTQ9UKG9 612 aa4.73□□□□□ -1.65
HMGB1P15-201ENST00000453854 FAM50BQ9Y247 325 aa4.73□□□□□ -1.65
HMGB1P15-201ENST00000453854 SIK3Q9Y2K2 1263 aa4.73□□□□□ -1.65
HMGB1P15-201ENST00000453854 AKR1B10O60218 316 aa4.72□□□□□ -1.65
HMGB1P15-201ENST00000453854 PLA2G1BP04054 148 aaKnown RBP4.72□□□□□ -1.65
HMGB1P15-201ENST00000453854 RPLP2P05387 115 aaKnown RBP4.72□□□□□ -1.65
HMGB1P15-201ENST00000453854 IFIT2P09913 472 aaKnown RBP4.72□□□□□ -1.65
HMGB1P15-201ENST00000453854 ZNF28P17035 718 aa4.72□□□□□ -1.65
HMGB1P15-201ENST00000453854 IL13P35225 146 aa4.72□□□□□ -1.65
HMGB1P15-201ENST00000453854 LIMS1P48059 325 aa4.72□□□□□ -1.65
HMGB1P15-201ENST00000453854 TM4SF4P48230 202 aa4.72□□□□□ -1.65
HMGB1P15-201ENST00000453854 HK3P52790 923 aa4.72□□□□□ -1.65
HMGB1P15-201ENST00000453854 SESN2P58004 480 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P15-201ENST00000453854 CDC42EP1Q00587 391 aa4.72□□□□□ -1.65
HMGB1P15-201ENST00000453854 DLX2Q07687 328 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P15-201ENST00000453854 NOMO1Q15155 1222 aa4.72□□□□□ -1.65
HMGB1P15-201ENST00000453854 UBE3CQ15386 1083 aa4.72□□□□□ -1.65
HMGB1P15-201ENST00000453854 ZNF827Q17R98 1081 aa4.72□□□□□ -1.65
HMGB1P15-201ENST00000453854 C4orf46Q504U0 113 aa4.72□□□□□ -1.65
HMGB1P15-201ENST00000453854 THEMIS2Q5TEJ8 643 aa4.72□□□□□ -1.65
HMGB1P15-201ENST00000453854 TMEM132EQ6IEE7 984 aa4.72□□□□□ -1.65
HMGB1P15-201ENST00000453854 SWSAP1Q6NVH7 229 aa4.72□□□□□ -1.65
HMGB1P15-201ENST00000453854 DARS2Q6PI48 645 aaKnown RBP4.72□□□□□ -1.65
HMGB1P15-201ENST00000453854 TOGARAM2Q6ZUX3 1019 aa4.72□□□□□ -1.65
HMGB1P15-201ENST00000453854 FAM129CQ86XR2 697 aa4.72□□□□□ -1.65
HMGB1P15-201ENST00000453854 TMEFF1Q8IYR6 380 aa4.72□□□□□ -1.65
HMGB1P15-201ENST00000453854 SPICE1Q8N0Z3 855 aa4.72□□□□□ -1.65
HMGB1P15-201ENST00000453854 KRT78Q8N1N4 520 aa4.72□□□□□ -1.65
HMGB1P15-201ENST00000453854 KLHDC4Q8TBB5 520 aa4.72□□□□□ -1.65
HMGB1P15-201ENST00000453854 PNISRQ8TF01 805 aaKnown RBP4.72□□□□□ -1.65
HMGB1P15-201ENST00000453854 KAT5Q92993 513 aa4.72□□□□□ -1.65
HMGB1P15-201ENST00000453854 GJA10Q969M2 543 aa4.72□□□□□ -1.65
HMGB1P15-201ENST00000453854 GFM2Q969S9 779 aaKnown RBP4.72□□□□□ -1.65
HMGB1P15-201ENST00000453854 ZBTB8AQ96BR9 441 aa4.72□□□□□ -1.65
HMGB1P15-201ENST00000453854 MRGPRX4Q96LA9 322 aa4.72□□□□□ -1.65
HMGB1P15-201ENST00000453854 ELAC2Q9BQ52 826 aaKnown RBP4.72□□□□□ -1.65
HMGB1P15-201ENST00000453854 MAF1Q9H063 256 aa4.72□□□□□ -1.65
HMGB1P15-201ENST00000453854 KATNBL1Q9H079 304 aa4.72□□□□□ -1.65
HMGB1P15-201ENST00000453854 BHMT2Q9H2M3 363 aa4.72□□□□□ -1.65
HMGB1P15-201ENST00000453854 SPATA6Q9NWH7 488 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P15-201ENST00000453854 CDC42EP3Q9UKI2 254 aa4.72□□□□□ -1.65
HMGB1P15-201ENST00000453854 PHTF1Q9UMS5 762 aa4.72□□□□□ -1.65
HMGB1P15-201ENST00000453854 STXBP5LQ9Y2K9 1186 aa4.72□□□□□ -1.65
HMGB1P15-201ENST00000453854 PCDHA13Q9Y5I0 950 aa4.72□□□□□ -1.65
HMGB1P15-201ENST00000453854 NCANO14594 1321 aa4.72□□□□□ -1.65
HMGB1P15-201ENST00000453854 CAPN8A6NHC0 703 aa4.71□□□□□ -1.66
HMGB1P15-201ENST00000453854 GOLIM4O00461 696 aa4.71□□□□□ -1.66
HMGB1P15-201ENST00000453854 PRRG2O14669 202 aa4.71□□□□□ -1.66
HMGB1P15-201ENST00000453854 ENDOD1O94919 500 aa4.71□□□□□ -1.66
HMGB1P15-201ENST00000453854 HNRNPLP14866 589 aaKnown RBP eCLIP4.71□□□□□ -1.66
HMGB1P15-201ENST00000453854 HOXA5P20719 270 aa4.71□□□□□ -1.66
HMGB1P15-201ENST00000453854 RPL13P26373 211 aaKnown RBP4.71□□□□□ -1.66
HMGB1P15-201ENST00000453854 ALDH5A1P51649 535 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P15-201ENST00000453854 CACNB3P54284 484 aa4.71□□□□□ -1.66
HMGB1P15-201ENST00000453854 WNT3AP56704 352 aa4.71□□□□□ -1.66
HMGB1P15-201ENST00000453854 NKX6-1P78426 367 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P15-201ENST00000453854 CAP1Q01518 475 aa4.71□□□□□ -1.66
HMGB1P15-201ENST00000453854 SMAD4Q13485 552 aaKnown RBP4.71□□□□□ -1.66
HMGB1P15-201ENST00000453854 KIAA0753Q2KHM9 967 aa4.71□□□□□ -1.66
HMGB1P15-201ENST00000453854 LCE5AQ5TCM9 118 aa4.71□□□□□ -1.66
HMGB1P15-201ENST00000453854 CCDC149Q6ZUS6 474 aa4.71□□□□□ -1.66
HMGB1P15-201ENST00000453854 CLEC14AQ86T13 490 aa4.71□□□□□ -1.66
HMGB1P15-201ENST00000453854 DRC7Q8IY82 874 aa4.71□□□□□ -1.66
HMGB1P15-201ENST00000453854 PLBD2Q8NHP8 589 aa4.71□□□□□ -1.66
HMGB1P15-201ENST00000453854 FNIP1Q8TF40 1166 aa4.71□□□□□ -1.66
HMGB1P15-201ENST00000453854 RGMAQ96B86 450 aa4.71□□□□□ -1.66
HMGB1P15-201ENST00000453854 CYFIP2Q96F07 1278 aa4.71□□□□□ -1.66
HMGB1P15-201ENST00000453854 CDK5RAP3Q96JB5 506 aa4.71□□□□□ -1.66
HMGB1P15-201ENST00000453854 SAMD11Q96NU1 681 aa4.71□□□□□ -1.66
HMGB1P15-201ENST00000453854 KRTAP9-3Q9BYQ3 159 aa4.71□□□□□ -1.66
HMGB1P15-201ENST00000453854 BCO1Q9HAY6 547 aa4.71□□□□□ -1.66
HMGB1P15-201ENST00000453854 EPB41L4AQ9HCS5 686 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P15-201ENST00000453854 RAPGEFL1Q9UHV5 662 aa4.71□□□□□ -1.66
HMGB1P15-201ENST00000453854 TAGLN3Q9UI15 199 aa4.71□□□□□ -1.66
HMGB1P15-201ENST00000453854 POLHQ9Y253 713 aa4.71□□□□□ -1.66
HMGB1P15-201ENST00000453854 IFRD1O00458 451 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P15-201ENST00000453854 FRS3O43559 492 aa4.7□□□□□ -1.66
HMGB1P15-201ENST00000453854 SH3BP5O60239 455 aa4.7□□□□□ -1.66
HMGB1P15-201ENST00000453854 FTLP02792 175 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P15-201ENST00000453854 SERPINB3P29508 390 aa4.7□□□□□ -1.66
HMGB1P15-201ENST00000453854 ECHS1P30084 290 aa4.7□□□□□ -1.66
HMGB1P15-201ENST00000453854 BUD31P41223 144 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P15-201ENST00000453854 STAT5BP51692 787 aa4.7□□□□□ -1.66
HMGB1P15-201ENST00000453854 AK2P54819 239 aa4.7□□□□□ -1.66
HMGB1P15-201ENST00000453854 GPSM2P81274 684 aa4.7□□□□□ -1.66
HMGB1P15-201ENST00000453854 TARDBPQ13148 414 aaKnown RBP eCLIP4.7□□□□□ -1.66
HMGB1P15-201ENST00000453854 NOGQ13253 232 aa4.7□□□□□ -1.66
HMGB1P15-201ENST00000453854 CNN3Q15417 329 aaKnown RBP4.7□□□□□ -1.66
HMGB1P15-201ENST00000453854 RNF220Q5VTB9 566 aa4.7□□□□□ -1.66
HMGB1P15-201ENST00000453854 TRMT10BQ6PF06 316 aaKnown RBP4.7□□□□□ -1.66
HMGB1P15-201ENST00000453854 Q6ZUG5 572 aa4.7□□□□□ -1.66
HMGB1P15-201ENST00000453854 LARP4Q71RC2 724 aaKnown RBP eCLIP4.7□□□□□ -1.66
HMGB1P15-201ENST00000453854 MAEAQ7L5Y9 396 aa4.7□□□□□ -1.66
HMGB1P15-201ENST00000453854 DAAM2Q86T65 1068 aa4.7□□□□□ -1.66
HMGB1P15-201ENST00000453854 SAPCD2Q86UD0 394 aa4.7□□□□□ -1.66
HMGB1P15-201ENST00000453854 MORC1Q86VD1 984 aa4.7□□□□□ -1.66
HMGB1P15-201ENST00000453854 IFNL2Q8IZJ0 200 aa4.7□□□□□ -1.66
HMGB1P15-201ENST00000453854 LILRA3Q8N6C8 439 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P15-201ENST00000453854 NUDT10Q8NFP7 164 aa4.7□□□□□ -1.66
HMGB1P15-201ENST00000453854 NUDT11Q96G61 164 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms