RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 MBTPS2O43462 519 aa16.05■□□□□ 0.16
HSPG2-207ENST00000453796 EFEMP2O95967 443 aa16.05■□□□□ 0.16
HSPG2-207ENST00000453796 UBA7P41226 1012 aa16.05■□□□□ 0.16
HSPG2-207ENST00000453796 NDUFV1P49821 464 aa16.05■□□□□ 0.16
HSPG2-207ENST00000453796 RBM10P98175 930 aaKnown RBP16.05■□□□□ 0.16
HSPG2-207ENST00000453796 DMP1Q13316 513 aaPredicted RBP16.05■□□□□ 0.16
HSPG2-207ENST00000453796 SMC1AQ14683 1233 aaKnown RBP16.05■□□□□ 0.16
HSPG2-207ENST00000453796 TMEM184AQ6ZMB5 413 aa16.05■□□□□ 0.16
HSPG2-207ENST00000453796 HACE1Q8IYU2 909 aa16.05■□□□□ 0.16
HSPG2-207ENST00000453796 VPS52Q8N1B4 723 aa16.05■□□□□ 0.16
HSPG2-207ENST00000453796 MRPL43Q8N983 215 aaKnown RBP16.05■□□□□ 0.16
HSPG2-207ENST00000453796 CDK5RAP3Q96JB5 506 aa16.05■□□□□ 0.16
HSPG2-207ENST00000453796 NTPCRQ9BSD7 190 aaKnown RBP16.05■□□□□ 0.16
HSPG2-207ENST00000453796 CCSER1Q9C0I3 900 aa16.05■□□□□ 0.16
HSPG2-207ENST00000453796 ZSCAN16Q9H4T2 348 aaPredicted RBP16.05■□□□□ 0.16
HSPG2-207ENST00000453796 MARCH5Q9NX47 278 aa16.05■□□□□ 0.16
HSPG2-207ENST00000453796 DAXXQ9UER7 740 aaPredicted RBP16.05■□□□□ 0.16
HSPG2-207ENST00000453796 FAN1Q9Y2M0 1017 aa16.05■□□□□ 0.16
HSPG2-207ENST00000453796 SRPRBQ9Y5M8 271 aaKnown RBP16.05■□□□□ 0.16
HSPG2-207ENST00000453796 IRAK3Q9Y616 596 aa16.05■□□□□ 0.16
HSPG2-207ENST00000453796 PDCD11Q14690 1871 aaKnown RBP16.05■□□□□ 0.16
HSPG2-207ENST00000453796 C2orf71A6NGG8 1288 aa16.04■□□□□ 0.16
HSPG2-207ENST00000453796 CCDC169A6NNP5 214 aa16.04■□□□□ 0.16
HSPG2-207ENST00000453796 SFI1A8K8P3 1242 aa16.04■□□□□ 0.16
HSPG2-207ENST00000453796 K7ERI5 159 aa16.04■□□□□ 0.16
HSPG2-207ENST00000453796 ALDH2P05091 517 aa16.04■□□□□ 0.16
HSPG2-207ENST00000453796 CTSAP10619 480 aa16.04■□□□□ 0.16
HSPG2-207ENST00000453796 LIG1P18858 919 aa16.04■□□□□ 0.16
HSPG2-207ENST00000453796 PLCG1P19174 1290 aa16.04■□□□□ 0.16
HSPG2-207ENST00000453796 RAD51AP2Q09MP3 1159 aa16.04■□□□□ 0.16
HSPG2-207ENST00000453796 COASYQ13057 564 aa16.04■□□□□ 0.16
HSPG2-207ENST00000453796 KARSQ15046 597 aaKnown RBP16.04■□□□□ 0.16
HSPG2-207ENST00000453796 ATF7IP2Q5U623 682 aa16.04■□□□□ 0.16
HSPG2-207ENST00000453796 USP49Q70CQ1 688 aa16.04■□□□□ 0.16
HSPG2-207ENST00000453796 RNF168Q8IYW5 571 aaPredicted RBP16.04■□□□□ 0.16
HSPG2-207ENST00000453796 SMRP1Q8NCR6 262 aa16.04■□□□□ 0.16
HSPG2-207ENST00000453796 SPIRE2Q8WWL2 714 aa16.04■□□□□ 0.16
HSPG2-207ENST00000453796 CALML4Q96GE6 196 aa16.04■□□□□ 0.16
HSPG2-207ENST00000453796 FAM193BQ96PV7 902 aaPredicted RBP16.04■□□□□ 0.16
HSPG2-207ENST00000453796 USP28Q96RU2 1077 aa16.04■□□□□ 0.16
HSPG2-207ENST00000453796 ACO2Q99798 780 aaKnown RBP16.04■□□□□ 0.16
HSPG2-207ENST00000453796 ADPGKQ9BRR6 497 aa16.04■□□□□ 0.16
HSPG2-207ENST00000453796 CD320Q9NPF0 282 aa16.04■□□□□ 0.16
HSPG2-207ENST00000453796 KMT5AQ9NQR1 393 aa16.04■□□□□ 0.16
HSPG2-207ENST00000453796 SNTG2Q9NY99 539 aa16.04■□□□□ 0.16
HSPG2-207ENST00000453796 CD207Q9UJ71 328 aa16.04■□□□□ 0.16
HSPG2-207ENST00000453796 BARX2Q9UMQ3 279 aaPredicted RBP16.04■□□□□ 0.16
HSPG2-207ENST00000453796 TNFSF13BQ9Y275 285 aa16.04■□□□□ 0.16
HSPG2-207ENST00000453796 BDP1A6H8Y1 2624 aa16.04■□□□□ 0.16
HSPG2-207ENST00000453796 NPHP3-ACAD11A0A0J9YXS1 232 aa16.03■□□□□ 0.16
HSPG2-207ENST00000453796 ABLIM1O14639 778 aa16.03■□□□□ 0.16
HSPG2-207ENST00000453796 PTGESO14684 152 aa16.03■□□□□ 0.16
HSPG2-207ENST00000453796 SSBP05455 408 aaKnown RBP eCLIP16.03■□□□□ 0.16
HSPG2-207ENST00000453796 PLS3P13797 630 aa16.03■□□□□ 0.16
HSPG2-207ENST00000453796 MARCKSP29966 332 aaPredicted RBP16.03■□□□□ 0.16
HSPG2-207ENST00000453796 GRIK3Q13003 919 aa16.03■□□□□ 0.16
HSPG2-207ENST00000453796 SMAD4Q13485 552 aaKnown RBP16.03■□□□□ 0.16
HSPG2-207ENST00000453796 SMAD2Q15796 467 aaKnown RBP16.03■□□□□ 0.16
HSPG2-207ENST00000453796 CLUL1Q15846 466 aa16.03■□□□□ 0.16
HSPG2-207ENST00000453796 DCAF4L1Q3SXM0 396 aa16.03■□□□□ 0.16
HSPG2-207ENST00000453796 HSCBQ8IWL3 235 aa16.03■□□□□ 0.16
HSPG2-207ENST00000453796 KCNN1Q92952 543 aa16.03■□□□□ 0.16
HSPG2-207ENST00000453796 EPSTI1Q96J88 318 aa16.03■□□□□ 0.16
HSPG2-207ENST00000453796 CXCL16Q9H2A7 254 aa16.03■□□□□ 0.16
HSPG2-207ENST00000453796 PTPRHQ9HD43 1115 aa16.03■□□□□ 0.16
HSPG2-207ENST00000453796 KLK14Q9P0G3 267 aa16.03■□□□□ 0.16
HSPG2-207ENST00000453796 PARP2Q9UGN5 583 aa16.03■□□□□ 0.16
HSPG2-207ENST00000453796 RBM19Q9Y4C8 960 aaKnown RBP16.03■□□□□ 0.16
HSPG2-207ENST00000453796 PLXNA3P51805 1871 aa16.03■□□□□ 0.16
HSPG2-207ENST00000453796 F8W810 466 aa16.02■□□□□ 0.16
HSPG2-207ENST00000453796 SLC16A4O15374 487 aa16.02■□□□□ 0.16
HSPG2-207ENST00000453796 RECQL4O94761 1208 aa16.02■□□□□ 0.16
HSPG2-207ENST00000453796 CXCL14O95715 111 aa16.02■□□□□ 0.16
HSPG2-207ENST00000453796 PROZP22891 400 aa16.02■□□□□ 0.16
HSPG2-207ENST00000453796 NASPP49321 788 aaPredicted RBP16.02■□□□□ 0.16
HSPG2-207ENST00000453796 CACNB1Q02641 598 aaPredicted RBP16.02■□□□□ 0.16
HSPG2-207ENST00000453796 MCM6Q14566 821 aa16.02■□□□□ 0.16
HSPG2-207ENST00000453796 SLC39A14Q15043 492 aa16.02■□□□□ 0.16
HSPG2-207ENST00000453796 NAB2Q15742 525 aa16.02■□□□□ 0.16
HSPG2-207ENST00000453796 TMEM132AQ24JP5 1023 aa16.02■□□□□ 0.16
HSPG2-207ENST00000453796 SPECC1Q5M775 1068 aa16.02■□□□□ 0.16
HSPG2-207ENST00000453796 TMEM161BQ8NDZ6 487 aa16.02■□□□□ 0.16
HSPG2-207ENST00000453796 AUTS2Q8WXX7 1259 aa16.02■□□□□ 0.16
HSPG2-207ENST00000453796 RAD54LQ92698 747 aa16.02■□□□□ 0.16
HSPG2-207ENST00000453796 CLIC6Q96NY7 704 aa16.02■□□□□ 0.16
HSPG2-207ENST00000453796 REEP2Q9BRK0 252 aa16.02■□□□□ 0.16
HSPG2-207ENST00000453796 STK39Q9UEW8 545 aa16.02■□□□□ 0.16
HSPG2-207ENST00000453796 ODF2LQ9ULJ1 636 aa16.02■□□□□ 0.16
HSPG2-207ENST00000453796 FAM50BQ9Y247 325 aa16.02■□□□□ 0.16
HSPG2-207ENST00000453796 VWA8A3KMH1 1905 aa16.02■□□□□ 0.15
HSPG2-207ENST00000453796 MTCL1Q9Y4B5 1905 aaKnown RBP16.02■□□□□ 0.15
HSPG2-207ENST00000453796 LILRB3O75022 631 aa16.01■□□□□ 0.15
HSPG2-207ENST00000453796 CLASP2O75122 1294 aaKnown RBP16.01■□□□□ 0.15
HSPG2-207ENST00000453796 OR1G1P47890 313 aa16.01■□□□□ 0.15
HSPG2-207ENST00000453796 ZNF131P52739 623 aa16.01■□□□□ 0.15
HSPG2-207ENST00000453796 NCKAP1LP55160 1127 aa16.01■□□□□ 0.15
HSPG2-207ENST00000453796 CEBPZQ03701 1054 aaKnown RBP16.01■□□□□ 0.15
HSPG2-207ENST00000453796 PTPN14Q15678 1187 aa16.01■□□□□ 0.15
HSPG2-207ENST00000453796 GPBP1Q86WP2 473 aa16.01■□□□□ 0.15
HSPG2-207ENST00000453796 LARP4BQ92615 738 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms