RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 RASGEF1CQ8N431 466 aa14.81□□□□□ -0.04
UBE2D3-210ENST00000453744 SH3GL3Q99963 347 aa14.81□□□□□ -0.04
UBE2D3-210ENST00000453744 ZFP69BQ9UJL9 534 aa14.81□□□□□ -0.04
UBE2D3-210ENST00000453744 PITPNM2Q9BZ72 1349 aa14.81□□□□□ -0.04
UBE2D3-210ENST00000453744 KCPQ6ZWJ8 1503 aa14.8□□□□□ -0.04
UBE2D3-210ENST00000453744 HARSP12081 509 aaKnown RBP14.8□□□□□ -0.04
UBE2D3-210ENST00000453744 CHKAP35790 457 aa14.8□□□□□ -0.04
UBE2D3-210ENST00000453744 CERKLQ49MI3 558 aaPredicted RBP14.8□□□□□ -0.04
UBE2D3-210ENST00000453744 IZUMO3Q5VZ72 239 aa14.8□□□□□ -0.04
UBE2D3-210ENST00000453744 TTC27Q6P3X3 843 aa14.8□□□□□ -0.04
UBE2D3-210ENST00000453744 CCDC62Q6P9F0 684 aa14.8□□□□□ -0.04
UBE2D3-210ENST00000453744 SLC30A9Q6PML9 568 aa14.8□□□□□ -0.04
UBE2D3-210ENST00000453744 GRK7Q8WTQ7 553 aa14.8□□□□□ -0.04
UBE2D3-210ENST00000453744 UBN1Q9NPG3 1134 aa14.8□□□□□ -0.04
UBE2D3-210ENST00000453744 ZFATQ9P243 1243 aa14.8□□□□□ -0.04
UBE2D3-210ENST00000453744 LARSQ9P2J5 1176 aaKnown RBP14.8□□□□□ -0.04
UBE2D3-210ENST00000453744 COG5Q9UP83 839 aa14.8□□□□□ -0.04
UBE2D3-210ENST00000453744 TRAF3IP3Q9Y228 551 aa14.8□□□□□ -0.04
UBE2D3-210ENST00000453744 TISP43B9A030 160 aa14.8□□□□□ -0.04
UBE2D3-210ENST00000453744 PI4K2BG5E9Z4 385 aa14.8□□□□□ -0.04
UBE2D3-210ENST00000453744 DDX3YO15523 660 aaKnown RBP14.8□□□□□ -0.04
UBE2D3-210ENST00000453744 PIAS1O75925 651 aa14.8□□□□□ -0.04
UBE2D3-210ENST00000453744 RPA1P27694 616 aa14.8□□□□□ -0.04
UBE2D3-210ENST00000453744 SLC12A3P55017 1021 aa14.8□□□□□ -0.04
UBE2D3-210ENST00000453744 FAM98CQ17RN3 349 aaKnown RBP14.8□□□□□ -0.04
UBE2D3-210ENST00000453744 C6orf163Q5TEZ5 329 aa14.8□□□□□ -0.04
UBE2D3-210ENST00000453744 TRMT10CQ7L0Y3 403 aaKnown RBP14.8□□□□□ -0.04
UBE2D3-210ENST00000453744 SNF8Q96H20 258 aa14.8□□□□□ -0.04
UBE2D3-210ENST00000453744 RXFP1Q9HBX9 757 aa14.8□□□□□ -0.04
UBE2D3-210ENST00000453744 SLCO1B3Q9NPD5 702 aa14.8□□□□□ -0.04
UBE2D3-210ENST00000453744 COL5A2P05997 1499 aaPredicted RBP14.8□□□□□ -0.04
UBE2D3-210ENST00000453744 EPHB2P29323 1055 aa14.8□□□□□ -0.04
UBE2D3-210ENST00000453744 NPEPPSP55786 919 aa14.8□□□□□ -0.04
UBE2D3-210ENST00000453744 EAPPQ56P03 285 aaPredicted RBP14.8□□□□□ -0.04
UBE2D3-210ENST00000453744 MIGA2Q7L4E1 593 aa14.8□□□□□ -0.04
UBE2D3-210ENST00000453744 PIGWQ7Z7B1 504 aa14.8□□□□□ -0.04
UBE2D3-210ENST00000453744 CFAP61Q8NHU2 1237 aa14.8□□□□□ -0.04
UBE2D3-210ENST00000453744 WNT8AQ9H1J5 351 aa14.8□□□□□ -0.04
UBE2D3-210ENST00000453744 KIF1AQ12756 1690 aa14.8□□□□□ -0.04
UBE2D3-210ENST00000453744 AFF2P51816 1311 aa14.79□□□□□ -0.04
UBE2D3-210ENST00000453744 RPTORQ8N122 1335 aa14.79□□□□□ -0.04
UBE2D3-210ENST00000453744 MMP14P50281 582 aa14.79□□□□□ -0.04
UBE2D3-210ENST00000453744 DYNLT1P63172 113 aa14.79□□□□□ -0.04
UBE2D3-210ENST00000453744 RINT1Q6NUQ1 792 aa14.79□□□□□ -0.04
UBE2D3-210ENST00000453744 CRELD2Q6UXH1 353 aaPredicted RBP14.79□□□□□ -0.04
UBE2D3-210ENST00000453744 RTFDC1Q9BY42 306 aaPredicted RBP14.79□□□□□ -0.04
UBE2D3-210ENST00000453744 NAALADL1Q9UQQ1 740 aa14.79□□□□□ -0.04
UBE2D3-210ENST00000453744 CDH16O75309 829 aa14.79□□□□□ -0.04
UBE2D3-210ENST00000453744 BFSP1Q12934 665 aa14.79□□□□□ -0.04
UBE2D3-210ENST00000453744 DAB2IPQ5VWQ8 1189 aa14.79□□□□□ -0.04
UBE2D3-210ENST00000453744 ZDHHC24Q6UX98 284 aa14.79□□□□□ -0.04
UBE2D3-210ENST00000453744 SPOCK2Q92563 424 aa14.79□□□□□ -0.04
UBE2D3-210ENST00000453744 RBM15Q96T37 977 aaKnown RBP eCLIP14.79□□□□□ -0.042e-7■■■□□ 16.3
UBE2D3-210ENST00000453744 ARHGEF10LQ9HCE6 1279 aa14.79□□□□□ -0.04
UBE2D3-210ENST00000453744 CHST7Q9NS84 486 aa14.79□□□□□ -0.04
UBE2D3-210ENST00000453744 SCOCQ9UIL1 159 aa14.79□□□□□ -0.04
UBE2D3-210ENST00000453744 CCNL1Q9UK58 526 aaPredicted RBP14.79□□□□□ -0.04
UBE2D3-210ENST00000453744 LGR5O75473 907 aa14.79□□□□□ -0.04
UBE2D3-210ENST00000453744 GNAT1P11488 350 aa14.79□□□□□ -0.04
UBE2D3-210ENST00000453744 CD58P19256 250 aa14.79□□□□□ -0.04
UBE2D3-210ENST00000453744 HOXA7P31268 230 aaPredicted RBP14.79□□□□□ -0.04
UBE2D3-210ENST00000453744 VAMP7P51809 220 aa14.79□□□□□ -0.04
UBE2D3-210ENST00000453744 EMC10Q5UCC4 262 aa14.79□□□□□ -0.04
UBE2D3-210ENST00000453744 ANKMY2Q8IV38 441 aa14.79□□□□□ -0.04
UBE2D3-210ENST00000453744 MYLK2Q9H1R3 596 aa14.79□□□□□ -0.04
UBE2D3-210ENST00000453744 TRABDQ9H4I3 376 aa14.79□□□□□ -0.04
UBE2D3-210ENST00000453744 ASTN1O14525 1302 aa14.78□□□□□ -0.04
UBE2D3-210ENST00000453744 TXNDC9O14530 226 aa14.78□□□□□ -0.04
UBE2D3-210ENST00000453744 SLC16A3O15427 465 aaKnown RBP14.78□□□□□ -0.04
UBE2D3-210ENST00000453744 PPP1R11O60927 126 aaPredicted RBP14.78□□□□□ -0.04
UBE2D3-210ENST00000453744 EYA4O95677 639 aa14.78□□□□□ -0.04
UBE2D3-210ENST00000453744 TEKT4Q8WW24 435 aa14.78□□□□□ -0.04
UBE2D3-210ENST00000453744 DNAJC9Q8WXX5 260 aa14.78□□□□□ -0.04
UBE2D3-210ENST00000453744 SLC5A5Q92911 643 aa14.78□□□□□ -0.04
UBE2D3-210ENST00000453744 FAXDC2Q96IV6 333 aa14.78□□□□□ -0.04
UBE2D3-210ENST00000453744 ZNF570Q96NI8 536 aa14.78□□□□□ -0.04
UBE2D3-210ENST00000453744 ROPN1BQ9BZX4 212 aaPredicted RBP14.78□□□□□ -0.04
UBE2D3-210ENST00000453744 ROPN1Q9HAT0 212 aaPredicted RBP14.78□□□□□ -0.04
UBE2D3-210ENST00000453744 ZDHHC18Q9NUE0 388 aa14.78□□□□□ -0.04
UBE2D3-210ENST00000453744 PHTF1Q9UMS5 762 aa14.78□□□□□ -0.04
UBE2D3-210ENST00000453744 FAM47DPA6NHR8 397 aa14.78□□□□□ -0.04
UBE2D3-210ENST00000453744 BTNL10A8MVZ5 291 aa14.78□□□□□ -0.04
UBE2D3-210ENST00000453744 GYG2O15488 501 aa14.78□□□□□ -0.04
UBE2D3-210ENST00000453744 ENTPD5O75356 428 aa14.78□□□□□ -0.04
UBE2D3-210ENST00000453744 GPSM2P81274 684 aa14.78□□□□□ -0.04
UBE2D3-210ENST00000453744 CDR2Q01850 454 aa14.78□□□□□ -0.04
UBE2D3-210ENST00000453744 FAM102BQ5T8I3 360 aa14.78□□□□□ -0.04
UBE2D3-210ENST00000453744 BTNL9Q6UXG8 535 aa14.78□□□□□ -0.04
UBE2D3-210ENST00000453744 PPP1R14CQ8TAE6 165 aa14.78□□□□□ -0.04
UBE2D3-210ENST00000453744 MAGEC3Q8TD91 643 aa14.78□□□□□ -0.04
UBE2D3-210ENST00000453744 AGPAT3Q9NRZ7 376 aa14.78□□□□□ -0.04
UBE2D3-210ENST00000453744 ADAM22Q9P0K1 906 aa14.78□□□□□ -0.04
UBE2D3-210ENST00000453744 SLC12A4Q9UP95 1085 aa14.78□□□□□ -0.04
UBE2D3-210ENST00000453744 BCL9O00512 1426 aa14.78□□□□□ -0.04
UBE2D3-210ENST00000453744 RTN2O75298 545 aa14.78□□□□□ -0.04
UBE2D3-210ENST00000453744 CPA2P48052 419 aa14.78□□□□□ -0.04
UBE2D3-210ENST00000453744 MFAP3P55082 362 aa14.78□□□□□ -0.04
UBE2D3-210ENST00000453744 KLC1Q07866 573 aa14.78□□□□□ -0.04
UBE2D3-210ENST00000453744 RRP1BQ14684 758 aaKnown RBP14.78□□□□□ -0.04
UBE2D3-210ENST00000453744 TNS2Q63HR2 1409 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms