RNA–Protein interactions for RNA: ENST00000452375.5

COPS7B-216, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 4

Gene COPS7B, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-216ENST00000452375 INVSQ9Y283 1065 aa8.1□□□□□ -1.11
COPS7B-216ENST00000452375 XIRP2A4UGR9 3374 aa8.1□□□□□ -1.11
COPS7B-216ENST00000452375 MAST3O60307 1309 aa8.09□□□□□ -1.11
COPS7B-216ENST00000452375 FRAT2O75474 233 aaPredicted RBP8.09□□□□□ -1.11
COPS7B-216ENST00000452375 ZNF20P17024 532 aa8.09□□□□□ -1.11
COPS7B-216ENST00000452375 EPHB4P54760 987 aa8.09□□□□□ -1.11
COPS7B-216ENST00000452375 PPP2R5EQ16537 467 aa8.09□□□□□ -1.11
COPS7B-216ENST00000452375 CCDC57Q2TAC2 916 aa8.09□□□□□ -1.11
COPS7B-216ENST00000452375 TAF7LQ5H9L4 462 aa8.09□□□□□ -1.11
COPS7B-216ENST00000452375 CPZQ66K79 652 aa8.09□□□□□ -1.11
COPS7B-216ENST00000452375 VPS37DQ86XT2 251 aa8.09□□□□□ -1.11
COPS7B-216ENST00000452375 CHST13Q8NET6 341 aa8.09□□□□□ -1.11
COPS7B-216ENST00000452375 DNAAF4Q8WXU2 420 aa8.09□□□□□ -1.11
COPS7B-216ENST00000452375 C11orf84Q9BUA3 381 aaPredicted RBP8.09□□□□□ -1.11
COPS7B-216ENST00000452375 TXNRD2Q9NNW7 524 aa8.09□□□□□ -1.11
COPS7B-216ENST00000452375 GPRC5CQ9NQ84 441 aa8.09□□□□□ -1.11
COPS7B-216ENST00000452375 MORF4L1Q9UBU8 362 aa8.09□□□□□ -1.11
COPS7B-216ENST00000452375 REV3LO60673 3130 aa8.09□□□□□ -1.11
COPS7B-216ENST00000452375 TRIM43BA6NCK2 446 aa8.08□□□□□ -1.12
COPS7B-216ENST00000452375 DDTLA6NHG4 134 aaPredicted RBP8.08□□□□□ -1.12
COPS7B-216ENST00000452375 CTNND1O60716 968 aaKnown RBP8.08□□□□□ -1.12
COPS7B-216ENST00000452375 PLATP00750 562 aa8.08□□□□□ -1.12
COPS7B-216ENST00000452375 ZKSCAN1P17029 563 aaPredicted RBP8.08□□□□□ -1.12
COPS7B-216ENST00000452375 ITGB8P26012 769 aa8.08□□□□□ -1.12
COPS7B-216ENST00000452375 THBS2P35442 1172 aa8.08□□□□□ -1.12
COPS7B-216ENST00000452375 RGS3P49796 1198 aa8.08□□□□□ -1.12
COPS7B-216ENST00000452375 MBLAC2Q68D91 279 aa8.08□□□□□ -1.12
COPS7B-216ENST00000452375 KRTAP5-3Q6L8H2 238 aa8.08□□□□□ -1.12
COPS7B-216ENST00000452375 ETV3LQ6ZN32 361 aa8.08□□□□□ -1.12
COPS7B-216ENST00000452375 TEX2Q8IWB9 1127 aa8.08□□□□□ -1.12
COPS7B-216ENST00000452375 LINC00482Q8N8I6 264 aa8.08□□□□□ -1.12
COPS7B-216ENST00000452375 TRIM43Q96BQ3 446 aaPredicted RBP8.08□□□□□ -1.12
COPS7B-216ENST00000452375 LRFN3Q9BTN0 628 aa8.08□□□□□ -1.12
COPS7B-216ENST00000452375 KRTAP3-1Q9BYR8 98 aa8.08□□□□□ -1.12
COPS7B-216ENST00000452375 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.08□□□□□ -1.12
COPS7B-216ENST00000452375 THEGQ9P2T0 379 aa8.08□□□□□ -1.12
COPS7B-216ENST00000452375 ST6GALNAC2Q9UJ37 374 aa8.08□□□□□ -1.12
COPS7B-216ENST00000452375 EFR3BQ9Y2G0 817 aa8.08□□□□□ -1.12
COPS7B-216ENST00000452375 ATP11BQ9Y2G3 1177 aa8.08□□□□□ -1.12
COPS7B-216ENST00000452375 SLC12A7Q9Y666 1083 aa8.08□□□□□ -1.12
COPS7B-216ENST00000452375 CHD9Q3L8U1 2897 aa8.07□□□□□ -1.12
COPS7B-216ENST00000452375 A0A1W2PQH9 124 aa8.07□□□□□ -1.12
COPS7B-216ENST00000452375 PLS3P13797 630 aa8.07□□□□□ -1.12
COPS7B-216ENST00000452375 PRDX5P30044 214 aa8.07□□□□□ -1.12
COPS7B-216ENST00000452375 HMGCS2P54868 508 aa8.07□□□□□ -1.12
COPS7B-216ENST00000452375 MRPS5P82675 430 aaKnown RBP8.07□□□□□ -1.12
COPS7B-216ENST00000452375 SPP2Q13103 211 aa8.07□□□□□ -1.12
COPS7B-216ENST00000452375 TRIM60Q495X7 471 aa8.07□□□□□ -1.12
COPS7B-216ENST00000452375 LRRC24Q50LG9 513 aa8.07□□□□□ -1.12
COPS7B-216ENST00000452375 CAVIN4Q5BKX8 364 aa8.07□□□□□ -1.12
COPS7B-216ENST00000452375 LIMS2Q7Z4I7 341 aa8.07□□□□□ -1.12
COPS7B-216ENST00000452375 ARHGEF39Q8N4T4 335 aa8.07□□□□□ -1.12
COPS7B-216ENST00000452375 VGLL2Q8N8G2 317 aa8.07□□□□□ -1.12
COPS7B-216ENST00000452375 SLC16A11Q8NCK7 471 aa8.07□□□□□ -1.12
COPS7B-216ENST00000452375 KLHL6Q8WZ60 621 aa8.07□□□□□ -1.12
COPS7B-216ENST00000452375 SNX27Q96L92 541 aa8.07□□□□□ -1.12
COPS7B-216ENST00000452375 C1QTNF1Q9BXJ1 281 aa8.07□□□□□ -1.12
COPS7B-216ENST00000452375 STK31Q9BXU1 1019 aa8.07□□□□□ -1.12
COPS7B-216ENST00000452375 PORCNQ9H237 461 aa8.07□□□□□ -1.12
COPS7B-216ENST00000452375 EPHX3Q9H6B9 360 aa8.07□□□□□ -1.12
COPS7B-216ENST00000452375 FLRT1Q9NZU1 646 aa8.07□□□□□ -1.12
COPS7B-216ENST00000452375 LRRFIP2Q9Y608 721 aaKnown RBP8.07□□□□□ -1.12
COPS7B-216ENST00000452375 RFX7Q2KHR2 1363 aa8.07□□□□□ -1.12
COPS7B-216ENST00000452375 DNM1LO00429 736 aa8.06□□□□□ -1.12
COPS7B-216ENST00000452375 KCNH1O95259 989 aa8.06□□□□□ -1.12
COPS7B-216ENST00000452375 ZNF16P17020 682 aaPredicted RBP8.06□□□□□ -1.12
COPS7B-216ENST00000452375 RPL13P26373 211 aaKnown RBP8.06□□□□□ -1.12
COPS7B-216ENST00000452375 SCRN1Q12765 414 aa8.06□□□□□ -1.12
COPS7B-216ENST00000452375 PAK2Q13177 524 aa8.06□□□□□ -1.12
COPS7B-216ENST00000452375 RRP1BQ14684 758 aaKnown RBP8.06□□□□□ -1.12
COPS7B-216ENST00000452375 GJC2Q5T442 439 aaPredicted RBP8.06□□□□□ -1.12
COPS7B-216ENST00000452375 BEND3Q5T5X7 828 aa8.06□□□□□ -1.12
COPS7B-216ENST00000452375 SLC39A5Q6ZMH5 540 aa8.06□□□□□ -1.12
COPS7B-216ENST00000452375 DCP2Q8IU60 420 aaKnown RBP8.06□□□□□ -1.12
COPS7B-216ENST00000452375 TRPV1Q8NER1 839 aa8.06□□□□□ -1.12
COPS7B-216ENST00000452375 PLEKHO2Q8TD55 490 aa8.06□□□□□ -1.12
COPS7B-216ENST00000452375 SOCS4Q8WXH5 440 aa8.06□□□□□ -1.12
COPS7B-216ENST00000452375 LPAR1Q92633 364 aa8.06□□□□□ -1.12
COPS7B-216ENST00000452375 TSR2Q969E8 191 aaKnown RBP8.06□□□□□ -1.12
COPS7B-216ENST00000452375 KAZALD1Q96I82 304 aa8.06□□□□□ -1.12
COPS7B-216ENST00000452375 RNPC3Q96LT9 517 aaKnown RBP8.06□□□□□ -1.12
COPS7B-216ENST00000452375 SAMD11Q96NU1 681 aa8.06□□□□□ -1.12
COPS7B-216ENST00000452375 P2RX7Q99572 595 aaKnown RBP8.06□□□□□ -1.12
COPS7B-216ENST00000452375 IDI2Q9BXS1 227 aa8.06□□□□□ -1.12
COPS7B-216ENST00000452375 CHMP4AQ9BY43 222 aa8.06□□□□□ -1.12
COPS7B-216ENST00000452375 AP5M1Q9H0R1 490 aa8.06□□□□□ -1.12
COPS7B-216ENST00000452375 DDX4Q9NQI0 724 aaKnown RBP8.06□□□□□ -1.12
COPS7B-216ENST00000452375 RBPJLQ9UBG7 517 aa8.06□□□□□ -1.12
COPS7B-216ENST00000452375 APEX2Q9UBZ4 518 aa8.06□□□□□ -1.12
COPS7B-216ENST00000452375 DDX20Q9UHI6 824 aaKnown RBP8.06□□□□□ -1.12
COPS7B-216ENST00000452375 AKT3Q9Y243 479 aa8.06□□□□□ -1.12
COPS7B-216ENST00000452375 MROH5Q6ZUA9 1318 aa8.05□□□□□ -1.12
COPS7B-216ENST00000452375 MYH13Q9UKX3 1938 aa8.05□□□□□ -1.12
COPS7B-216ENST00000452375 CHD7Q9P2D1 2997 aa8.05□□□□□ -1.12
COPS7B-216ENST00000452375 TRBV23OR9-2A0A075B6M9 112 aa8.05□□□□□ -1.12
COPS7B-216ENST00000452375 MROH6A6NGR9 719 aa8.05□□□□□ -1.12
COPS7B-216ENST00000452375 DDX3XO00571 662 aaKnown RBP eCLIP8.05□□□□□ -1.125e-8■■■□□ 17.9
COPS7B-216ENST00000452375 APAF1O14727 1248 aa8.05□□□□□ -1.12
COPS7B-216ENST00000452375 SGSM2O43147 1006 aa8.05□□□□□ -1.12
COPS7B-216ENST00000452375 ENTPD3O75355 529 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms