RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 KLK14Q9P0G3 267 aa16.86■□□□□ 0.29
CHD3-205ENST00000449744 EFNA5P52803 228 aa16.85■□□□□ 0.29
CHD3-205ENST00000449744 CBX2Q14781 532 aaPredicted RBP16.85■□□□□ 0.29
CHD3-205ENST00000449744 PPFIBP1Q86W92 1011 aa16.85■□□□□ 0.29
CHD3-205ENST00000449744 RNF135Q8IUD6 432 aa16.85■□□□□ 0.29
CHD3-205ENST00000449744 SUSD6Q92537 303 aa16.85■□□□□ 0.29
CHD3-205ENST00000449744 RPGRIP1Q96KN7 1286 aa16.85■□□□□ 0.29
CHD3-205ENST00000449744 KIFC3Q9BVG8 833 aa16.85■□□□□ 0.29
CHD3-205ENST00000449744 COLEC11Q9BWP8 271 aa16.85■□□□□ 0.29
CHD3-205ENST00000449744 VN1R3Q9BXE9 311 aa16.85■□□□□ 0.29
CHD3-205ENST00000449744 PDZD7Q9H5P4 517 aa16.85■□□□□ 0.29
CHD3-205ENST00000449744 MRPL17Q9NRX2 175 aaKnown RBP16.85■□□□□ 0.29
CHD3-205ENST00000449744 SSX2IPQ9Y2D8 614 aa16.85■□□□□ 0.29
CHD3-205ENST00000449744 VWA3AA6NCI4 1184 aa16.84■□□□□ 0.29
CHD3-205ENST00000449744 SPDYE4A6NLX3 237 aa16.84■□□□□ 0.29
CHD3-205ENST00000449744 CCDC169A6NNP5 214 aa16.84■□□□□ 0.29
CHD3-205ENST00000449744 K7ERI5 159 aa16.84■□□□□ 0.29
CHD3-205ENST00000449744 SOD2P04179 222 aa16.84■□□□□ 0.29
CHD3-205ENST00000449744 URODP06132 367 aa16.84■□□□□ 0.29
CHD3-205ENST00000449744 KLRC2P26717 231 aa16.84■□□□□ 0.29
CHD3-205ENST00000449744 ITIH3Q06033 890 aa16.84■□□□□ 0.29
CHD3-205ENST00000449744 DSC1Q08554 894 aa16.84■□□□□ 0.29
CHD3-205ENST00000449744 GRIK3Q13003 919 aa16.84■□□□□ 0.29
CHD3-205ENST00000449744 PTPN14Q15678 1187 aa16.84■□□□□ 0.29
CHD3-205ENST00000449744 APBB1IPQ7Z5R6 666 aaPredicted RBP16.84■□□□□ 0.29
CHD3-205ENST00000449744 CDK5RAP3Q96JB5 506 aa16.84■□□□□ 0.29
CHD3-205ENST00000449744 DRC1Q96MC2 740 aa16.84■□□□□ 0.29
CHD3-205ENST00000449744 CCDC113Q9H0I3 377 aa16.84■□□□□ 0.29
CHD3-205ENST00000449744 NT5C3AQ9H0P0 336 aa16.84■□□□□ 0.29
CHD3-205ENST00000449744 DZANK1Q9NVP4 752 aa16.84■□□□□ 0.29
CHD3-205ENST00000449744 MARCH5Q9NX47 278 aa16.84■□□□□ 0.29
CHD3-205ENST00000449744 ZMYM2Q9UBW7 1377 aa16.84■□□□□ 0.29
CHD3-205ENST00000449744 TTLL13PA6NNM8 815 aa16.83■□□□□ 0.28
CHD3-205ENST00000449744 LOC730098B7Z3J9 87 aa16.83■□□□□ 0.28
CHD3-205ENST00000449744 C2CD2LO14523 706 aa16.83■□□□□ 0.28
CHD3-205ENST00000449744 HIP1RO75146 1068 aa16.83■□□□□ 0.28
CHD3-205ENST00000449744 PEX3P56589 373 aa16.83■□□□□ 0.28
CHD3-205ENST00000449744 DMP1Q13316 513 aaPredicted RBP16.83■□□□□ 0.28
CHD3-205ENST00000449744 ARL6IP4Q66PJ3 421 aaKnown RBP16.83■□□□□ 0.28
CHD3-205ENST00000449744 KIAA1841Q6NSI8 718 aa16.83■□□□□ 0.28
CHD3-205ENST00000449744 KCTD17Q8N5Z5 321 aa16.83■□□□□ 0.28
CHD3-205ENST00000449744 KLHL5Q96PQ7 755 aa16.83■□□□□ 0.28
CHD3-205ENST00000449744 MMTAG2Q9BU76 263 aaKnown RBP16.83■□□□□ 0.28
CHD3-205ENST00000449744 HERC2P3Q9BVR0 1158 aa16.83■□□□□ 0.28
CHD3-205ENST00000449744 ADAM7Q9H2U9 754 aa16.83■□□□□ 0.28
CHD3-205ENST00000449744 C11orf16Q9NQ32 467 aa16.83■□□□□ 0.28
CHD3-205ENST00000449744 SNTG2Q9NY99 539 aa16.83■□□□□ 0.28
CHD3-205ENST00000449744 DAXXQ9UER7 740 aaPredicted RBP16.83■□□□□ 0.28
CHD3-205ENST00000449744 MUTYHQ9UIF7 546 aa16.83■□□□□ 0.28
CHD3-205ENST00000449744 USP20Q9Y2K6 914 aa16.83■□□□□ 0.28
CHD3-205ENST00000449744 TDRD15B5MCY1 1934 aaKnown RBP16.82■□□□□ 0.28
CHD3-205ENST00000449744 PRR33A8MZF0 331 aa16.82■□□□□ 0.28
CHD3-205ENST00000449744 EPCAMP16422 314 aa16.82■□□□□ 0.28
CHD3-205ENST00000449744 GLUD2P49448 558 aa16.82■□□□□ 0.28
CHD3-205ENST00000449744 DCAF4L1Q3SXM0 396 aa16.82■□□□□ 0.28
CHD3-205ENST00000449744 RARS2Q5T160 578 aaKnown RBP16.82■□□□□ 0.28
CHD3-205ENST00000449744 ATF7IP2Q5U623 682 aa16.82■□□□□ 0.28
CHD3-205ENST00000449744 RINT1Q6NUQ1 792 aa16.82■□□□□ 0.28
CHD3-205ENST00000449744 BRAPQ7Z569 592 aa16.82■□□□□ 0.28
CHD3-205ENST00000449744 CABP7Q86V35 215 aa16.82■□□□□ 0.28
CHD3-205ENST00000449744 GSTCDQ8NEC7 633 aa16.82■□□□□ 0.28
CHD3-205ENST00000449744 SLC22A17Q8WUG5 538 aa16.82■□□□□ 0.28
CHD3-205ENST00000449744 RIPOR3Q96MK2 946 aa16.82■□□□□ 0.28
CHD3-205ENST00000449744 NECTIN4Q96NY8 510 aa16.82■□□□□ 0.28
CHD3-205ENST00000449744 PLIN2Q99541 437 aa16.82■□□□□ 0.28
CHD3-205ENST00000449744 RUSC1Q9BVN2 902 aa16.82■□□□□ 0.28
CHD3-205ENST00000449744 TIPINQ9BVW5 301 aa16.82■□□□□ 0.28
CHD3-205ENST00000449744 PHLPP2Q6ZVD8 1323 aa16.81■□□□□ 0.28
CHD3-205ENST00000449744 VPS37CA5D8V6 355 aaPredicted RBP16.81■□□□□ 0.28
CHD3-205ENST00000449744 TADA2AO75478 443 aa16.81■□□□□ 0.28
CHD3-205ENST00000449744 RECQL4O94761 1208 aa16.81■□□□□ 0.28
CHD3-205ENST00000449744 BMP15O95972 392 aa16.81■□□□□ 0.28
CHD3-205ENST00000449744 CNPP09543 421 aaKnown RBP16.81■□□□□ 0.28
CHD3-205ENST00000449744 PDCP20941 246 aa16.81■□□□□ 0.28
CHD3-205ENST00000449744 MTHFRP42898 656 aa16.81■□□□□ 0.28
CHD3-205ENST00000449744 NPTX2P47972 431 aa16.81■□□□□ 0.28
CHD3-205ENST00000449744 TUSC3Q13454 348 aa16.81■□□□□ 0.28
CHD3-205ENST00000449744 CUL4AQ13619 759 aa16.81■□□□□ 0.28
CHD3-205ENST00000449744 HERC4Q5GLZ8 1057 aaPredicted RBP16.81■□□□□ 0.28
CHD3-205ENST00000449744 HYIQ5T013 277 aa16.81■□□□□ 0.28
CHD3-205ENST00000449744 EEF1DP3Q658K8 133 aa16.81■□□□□ 0.28
CHD3-205ENST00000449744 C1orf186Q6ZWK4 172 aa16.81■□□□□ 0.28
CHD3-205ENST00000449744 KCNK18Q7Z418 384 aa16.81■□□□□ 0.28
CHD3-205ENST00000449744 FBXL18Q96ME1 805 aa16.81■□□□□ 0.28
CHD3-205ENST00000449744 PNMA5Q96PV4 448 aa16.81■□□□□ 0.28
CHD3-205ENST00000449744 C17orf75Q9HAS0 396 aa16.81■□□□□ 0.28
CHD3-205ENST00000449744 KMT5AQ9NQR1 393 aa16.81■□□□□ 0.28
CHD3-205ENST00000449744 KCNG1Q9UIX4 513 aa16.81■□□□□ 0.28
CHD3-205ENST00000449744 GDAQ9Y2T3 454 aa16.81■□□□□ 0.28
CHD3-205ENST00000449744 RBM19Q9Y4C8 960 aaKnown RBP16.81■□□□□ 0.28
CHD3-205ENST00000449744 LILRB3O75022 631 aa16.8■□□□□ 0.28
CHD3-205ENST00000449744 EDN1P05305 212 aa16.8■□□□□ 0.28
CHD3-205ENST00000449744 THP07101 528 aa16.8■□□□□ 0.28
CHD3-205ENST00000449744 ADH1AP07327 375 aa16.8■□□□□ 0.28
CHD3-205ENST00000449744 ATAT1Q5SQI0 421 aa16.8■□□□□ 0.28
CHD3-205ENST00000449744 NT5DC1Q5TFE4 455 aa16.8■□□□□ 0.28
CHD3-205ENST00000449744 FUT10Q6P4F1 479 aa16.8■□□□□ 0.28
CHD3-205ENST00000449744 TAS1R1Q7RTX1 841 aa16.8■□□□□ 0.28
CHD3-205ENST00000449744 C12orf76Q8N812 135 aaPredicted RBP16.8■□□□□ 0.28
CHD3-205ENST00000449744 SYT2Q8N9I0 419 aaPredicted RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms