RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 FAM151AQ8WW52 585 aa11.07□□□□□ -0.64
CTC1-202ENST00000449476 ZNRF3Q9ULT6 936 aa11.07□□□□□ -0.64
CTC1-202ENST00000449476 JCADQ9P266 1359 aa11.07□□□□□ -0.64
CTC1-202ENST00000449476 CHUKO15111 745 aa11.07□□□□□ -0.64
CTC1-202ENST00000449476 RAD51CO43502 376 aa11.07□□□□□ -0.64
CTC1-202ENST00000449476 ZBTB7AO95365 584 aa11.07□□□□□ -0.64
CTC1-202ENST00000449476 NR3C2P08235 984 aa11.07□□□□□ -0.64
CTC1-202ENST00000449476 STAT5BP51692 787 aa11.07□□□□□ -0.64
CTC1-202ENST00000449476 BCAR1P56945 870 aa11.07□□□□□ -0.64
CTC1-202ENST00000449476 COG2Q14746 738 aa11.07□□□□□ -0.64
CTC1-202ENST00000449476 APOBEC3FQ8IUX4 373 aaKnown RBP11.07□□□□□ -0.64
CTC1-202ENST00000449476 WDR75Q8IWA0 830 aaKnown RBP11.07□□□□□ -0.64
CTC1-202ENST00000449476 RNF149Q8NC42 400 aa11.07□□□□□ -0.64
CTC1-202ENST00000449476 RNF139Q8WU17 664 aa11.07□□□□□ -0.64
CTC1-202ENST00000449476 HNRNPLLQ8WVV9 542 aaKnown RBP11.07□□□□□ -0.64
CTC1-202ENST00000449476 NUDCD1Q96RS6 583 aa11.07□□□□□ -0.64
CTC1-202ENST00000449476 RIT2Q99578 217 aa11.07□□□□□ -0.64
CTC1-202ENST00000449476 DNAJC7Q99615 494 aa11.07□□□□□ -0.64
CTC1-202ENST00000449476 VCX3AQ9NNX9 186 aa11.07□□□□□ -0.64
CTC1-202ENST00000449476 FAM217BQ9NTX9 383 aaPredicted RBP11.07□□□□□ -0.64
CTC1-202ENST00000449476 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.07□□□□□ -0.64
CTC1-202ENST00000449476 PPARGC1AQ9UBK2 798 aaKnown RBP11.07□□□□□ -0.64
CTC1-202ENST00000449476 MID2Q9UJV3 735 aa11.07□□□□□ -0.64
CTC1-202ENST00000449476 MDH1P40925 334 aaKnown RBP11.06□□□□□ -0.64
CTC1-202ENST00000449476 KPNA2P52292 529 aaKnown RBP11.06□□□□□ -0.64
CTC1-202ENST00000449476 STX1BP61266 288 aa11.06□□□□□ -0.64
CTC1-202ENST00000449476 SEPT6Q14141 434 aa11.06□□□□□ -0.64
CTC1-202ENST00000449476 TTLL4Q14679 1199 aa11.06□□□□□ -0.64
CTC1-202ENST00000449476 FAM102AQ5T9C2 384 aaPredicted RBP11.06□□□□□ -0.64
CTC1-202ENST00000449476 CDKAL1Q5VV42 579 aa11.06□□□□□ -0.64
CTC1-202ENST00000449476 MMGT1Q8N4V1 131 aa11.06□□□□□ -0.64
CTC1-202ENST00000449476 SYN2Q92777 582 aaPredicted RBP11.06□□□□□ -0.64
CTC1-202ENST00000449476 CYP26B1Q9NR63 512 aa11.06□□□□□ -0.64
CTC1-202ENST00000449476 KLHL8Q9P2G9 620 aaPredicted RBP11.06□□□□□ -0.64
CTC1-202ENST00000449476 ZNF70Q9UC06 446 aaPredicted RBP11.06□□□□□ -0.64
CTC1-202ENST00000449476 SLC12A6Q9UHW9 1150 aa11.06□□□□□ -0.64
CTC1-202ENST00000449476 FIS1Q9Y3D6 152 aa11.06□□□□□ -0.64
CTC1-202ENST00000449476 FAM205AQ6ZU69 1335 aa11.06□□□□□ -0.64
CTC1-202ENST00000449476 A0A087X0T9 212 aa11.06□□□□□ -0.64
CTC1-202ENST00000449476 EIF3DO15371 548 aaKnown RBP eCLIP11.06□□□□□ -0.64
CTC1-202ENST00000449476 FAM228BP0C875 321 aa11.06□□□□□ -0.64
CTC1-202ENST00000449476 SLC1A1P43005 524 aa11.06□□□□□ -0.64
CTC1-202ENST00000449476 AP3M2P53677 418 aa11.06□□□□□ -0.64
CTC1-202ENST00000449476 TGS1Q96RS0 853 aaKnown RBP11.06□□□□□ -0.64
CTC1-202ENST00000449476 TEX13BQ9BXU2 312 aa11.06□□□□□ -0.64
CTC1-202ENST00000449476 CPSF3Q9UKF6 684 aaKnown RBP11.06□□□□□ -0.64
CTC1-202ENST00000449476 PI4K2BG5E9Z4 385 aa11.06□□□□□ -0.64
CTC1-202ENST00000449476 TMEM253P0C7T8 217 aa11.06□□□□□ -0.64
CTC1-202ENST00000449476 CIITAP33076 1130 aa11.06□□□□□ -0.64
CTC1-202ENST00000449476 EFNA5P52803 228 aa11.06□□□□□ -0.64
CTC1-202ENST00000449476 ILDR1Q86SU0 546 aaPredicted RBP11.06□□□□□ -0.64
CTC1-202ENST00000449476 TMEM143Q96AN5 459 aa11.06□□□□□ -0.64
CTC1-202ENST00000449476 MXRA8Q9BRK3 442 aa11.06□□□□□ -0.64
CTC1-202ENST00000449476 DDX56Q9NY93 547 aaKnown RBP11.06□□□□□ -0.64
CTC1-202ENST00000449476 DUSP10Q9Y6W6 482 aa11.06□□□□□ -0.64
CTC1-202ENST00000449476 ARHGEF37A1IGU5 675 aa11.05□□□□□ -0.64
CTC1-202ENST00000449476 HUS1O60921 280 aa11.05□□□□□ -0.64
CTC1-202ENST00000449476 ARSEP51690 589 aa11.05□□□□□ -0.64
CTC1-202ENST00000449476 NBPF9Q3BBW0 867 aa11.05□□□□□ -0.64
CTC1-202ENST00000449476 WDR72Q3MJ13 1102 aa11.05□□□□□ -0.64
CTC1-202ENST00000449476 PLA2G4FQ68DD2 849 aa11.05□□□□□ -0.64
CTC1-202ENST00000449476 RAB44Q7Z6P3 723 aaPredicted RBP11.05□□□□□ -0.64
CTC1-202ENST00000449476 DDX42Q86XP3 938 aaKnown RBP eCLIP11.05□□□□□ -0.64
CTC1-202ENST00000449476 USP38Q8NB14 1042 aa11.05□□□□□ -0.64
CTC1-202ENST00000449476 ATP11CQ8NB49 1132 aa11.05□□□□□ -0.64
CTC1-202ENST00000449476 CPA5Q8WXQ8 436 aa11.05□□□□□ -0.64
CTC1-202ENST00000449476 LRGUKQ96M69 825 aa11.05□□□□□ -0.64
CTC1-202ENST00000449476 SPATA33Q96N06 139 aa11.05□□□□□ -0.64
CTC1-202ENST00000449476 DCTN4Q9UJW0 460 aa11.05□□□□□ -0.64
CTC1-202ENST00000449476 INTUQ9ULD6 942 aa11.05□□□□□ -0.64
CTC1-202ENST00000449476 ALG6Q9Y672 507 aa11.05□□□□□ -0.64
CTC1-202ENST00000449476 KIAA0391O15091 583 aaKnown RBP11.05□□□□□ -0.64
CTC1-202ENST00000449476 PHF2O75151 1096 aa11.05□□□□□ -0.64
CTC1-202ENST00000449476 PLCB4Q15147 1175 aa11.05□□□□□ -0.64
CTC1-202ENST00000449476 KCTD17Q8N5Z5 321 aa11.05□□□□□ -0.64
CTC1-202ENST00000449476 PPWD1Q96BP3 646 aaKnown RBP11.05□□□□□ -0.64
CTC1-202ENST00000449476 OTUD5Q96G74 571 aa11.05□□□□□ -0.64
CTC1-202ENST00000449476 LRRC37BQ96QE4 947 aa11.05□□□□□ -0.64
CTC1-202ENST00000449476 PNKPQ96T60 521 aa11.05□□□□□ -0.64
CTC1-202ENST00000449476 LACRTQ9GZZ8 138 aa11.05□□□□□ -0.64
CTC1-202ENST00000449476 EHD2Q9NZN4 543 aa11.05□□□□□ -0.64
CTC1-202ENST00000449476 MROH1Q8NDA8 1641 aa11.05□□□□□ -0.64
CTC1-202ENST00000449476 SKIP12755 728 aa11.05□□□□□ -0.64
CTC1-202ENST00000449476 MUM1L1Q5H9M0 696 aa11.05□□□□□ -0.64
CTC1-202ENST00000449476 GJB7Q6PEY0 223 aa11.05□□□□□ -0.64
CTC1-202ENST00000449476 BEST2Q8NFU1 509 aa11.05□□□□□ -0.64
CTC1-202ENST00000449476 OR2W6PQ8NHA6 318 aa11.05□□□□□ -0.64
CTC1-202ENST00000449476 POLR3CQ9BUI4 534 aaPredicted RBP11.05□□□□□ -0.64
CTC1-202ENST00000449476 USH1CQ9Y6N9 552 aa11.05□□□□□ -0.64
CTC1-202ENST00000449476 MSH4O15457 936 aa11.05□□□□□ -0.64
CTC1-202ENST00000449476 GYG2O15488 501 aa11.05□□□□□ -0.64
CTC1-202ENST00000449476 SLC4A1P02730 911 aa11.05□□□□□ -0.64
CTC1-202ENST00000449476 CDH6P55285 790 aa11.05□□□□□ -0.64
CTC1-202ENST00000449476 NPEPPSP55786 919 aa11.05□□□□□ -0.64
CTC1-202ENST00000449476 NFIAQ12857 509 aa11.05□□□□□ -0.64
CTC1-202ENST00000449476 FIGNQ5HY92 759 aa11.05□□□□□ -0.64
CTC1-202ENST00000449476 EARS2Q5JPH6 523 aaKnown RBP11.05□□□□□ -0.64
CTC1-202ENST00000449476 TWF2Q6IBS0 349 aaKnown RBP11.05□□□□□ -0.64
CTC1-202ENST00000449476 CENPPQ6IPU0 288 aa11.05□□□□□ -0.64
CTC1-202ENST00000449476 RWDD4Q6NW29 188 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms