RNA–Protein interactions for RNA: ENST00000448472.5

CHRD-205, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,547 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-205ENST00000448472 CCDC88AQ3V6T2 1871 aa16.94■□□□□ 0.3
CHRD-205ENST00000448472 GTPBP10A4D1E9 387 aaKnown RBP16.94■□□□□ 0.3
CHRD-205ENST00000448472 MAPK4P31152 587 aa16.94■□□□□ 0.3
CHRD-205ENST00000448472 PTGIRP43119 386 aa16.94■□□□□ 0.3
CHRD-205ENST00000448472 VAMP7P51809 220 aa16.94■□□□□ 0.3
CHRD-205ENST00000448472 CDC42EP5Q6NZY7 148 aa16.94■□□□□ 0.3
CHRD-205ENST00000448472 SEC14L1Q92503 715 aa16.94■□□□□ 0.3
CHRD-205ENST00000448472 NGLY1Q96IV0 654 aa16.94■□□□□ 0.3
CHRD-205ENST00000448472 YIPF3Q9GZM5 350 aa16.94■□□□□ 0.3
CHRD-205ENST00000448472 NCANO14594 1321 aa16.94■□□□□ 0.3
CHRD-205ENST00000448472 ENO4A6NNW6 628 aa16.94■□□□□ 0.3
CHRD-205ENST00000448472 RASA4BC9J798 803 aa16.94■□□□□ 0.3
CHRD-205ENST00000448472 RASA4O43374 803 aa16.94■□□□□ 0.3
CHRD-205ENST00000448472 MYBL1P10243 752 aa16.94■□□□□ 0.3
CHRD-205ENST00000448472 MSH2P43246 934 aa16.94■□□□□ 0.3
CHRD-205ENST00000448472 SPIRE1Q08AE8 756 aa16.94■□□□□ 0.3
CHRD-205ENST00000448472 SYDE2Q5VT97 1194 aa16.94■□□□□ 0.3
CHRD-205ENST00000448472 DAB2IPQ5VWQ8 1189 aa16.94■□□□□ 0.3
CHRD-205ENST00000448472 PRR5LQ6MZQ0 368 aa16.94■□□□□ 0.3
CHRD-205ENST00000448472 SLC47A2Q86VL8 602 aa16.94■□□□□ 0.3
CHRD-205ENST00000448472 C8orf37Q96NL8 207 aa16.94■□□□□ 0.3
CHRD-205ENST00000448472 CBWD1Q9BRT8 395 aa16.94■□□□□ 0.3
CHRD-205ENST00000448472 TTC7AQ9ULT0 858 aaPredicted RBP16.94■□□□□ 0.3
CHRD-205ENST00000448472 ITGA8P53708 1063 aa16.93■□□□□ 0.3
CHRD-205ENST00000448472 RBM26Q5T8P6 1007 aaKnown RBP16.93■□□□□ 0.3
CHRD-205ENST00000448472 KAZNQ674X7 775 aa16.93■□□□□ 0.3
CHRD-205ENST00000448472 ZNF720Q7Z2F6 126 aa16.93■□□□□ 0.3
CHRD-205ENST00000448472 ZDHHC14Q8IZN3 488 aa16.93■□□□□ 0.3
CHRD-205ENST00000448472 ZNF577Q9BSK1 485 aa16.93■□□□□ 0.3
CHRD-205ENST00000448472 DNAJC18Q9H819 358 aa16.93■□□□□ 0.3
CHRD-205ENST00000448472 SLC12A4Q9UP95 1085 aa16.93■□□□□ 0.3
CHRD-205ENST00000448472 GABPAQ06546 454 aa16.93■□□□□ 0.3
CHRD-205ENST00000448472 WNT8AQ9H1J5 351 aa16.93■□□□□ 0.3
CHRD-205ENST00000448472 PCDHAC2Q9Y5I4 1007 aa16.93■□□□□ 0.3
CHRD-205ENST00000448472 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.93■□□□□ 0.3
CHRD-205ENST00000448472 WDR91A4D1P6 747 aa16.93■□□□□ 0.3
CHRD-205ENST00000448472 RTN2O75298 545 aa16.93■□□□□ 0.3
CHRD-205ENST00000448472 SLITRK3O94933 977 aa16.93■□□□□ 0.3
CHRD-205ENST00000448472 PLCB3Q01970 1234 aa16.93■□□□□ 0.3
CHRD-205ENST00000448472 DNAJC3Q13217 504 aa16.93■□□□□ 0.3
CHRD-205ENST00000448472 MIGA2Q7L4E1 593 aa16.93■□□□□ 0.3
CHRD-205ENST00000448472 PRUNE1Q86TP1 453 aa16.93■□□□□ 0.3
CHRD-205ENST00000448472 CCHCR1Q8TD31 782 aa16.93■□□□□ 0.3
CHRD-205ENST00000448472 SAAL1Q96ER3 474 aa16.93■□□□□ 0.3
CHRD-205ENST00000448472 OLFML3Q9NRN5 406 aa16.93■□□□□ 0.3
CHRD-205ENST00000448472 CHST7Q9NS84 486 aa16.93■□□□□ 0.3
CHRD-205ENST00000448472 CNOT7Q9UIV1 285 aaKnown RBP16.93■□□□□ 0.3
CHRD-205ENST00000448472 PDHA1P08559 390 aa16.92■□□□□ 0.3
CHRD-205ENST00000448472 ZBTB48P10074 688 aaPredicted RBP16.92■□□□□ 0.3
CHRD-205ENST00000448472 ATP2A2P16615 1042 aaKnown RBP16.92■□□□□ 0.3
CHRD-205ENST00000448472 ARHGEF18Q6ZSZ5 1173 aa16.92■□□□□ 0.3
CHRD-205ENST00000448472 FITM2Q8N6M3 262 aa16.92■□□□□ 0.3
CHRD-205ENST00000448472 GBP7Q8N8V2 638 aaPredicted RBP16.92■□□□□ 0.3
CHRD-205ENST00000448472 CCDC17Q96LX7 622 aa16.92■□□□□ 0.3
CHRD-205ENST00000448472 TMEM237Q96Q45 408 aa16.92■□□□□ 0.3
CHRD-205ENST00000448472 NACC1Q96RE7 527 aa16.92■□□□□ 0.3
CHRD-205ENST00000448472 DBNDD1Q9H9R9 158 aa16.92■□□□□ 0.3
CHRD-205ENST00000448472 LARSQ9P2J5 1176 aaKnown RBP16.92■□□□□ 0.3
CHRD-205ENST00000448472 AFF2P51816 1311 aa16.92■□□□□ 0.3
CHRD-205ENST00000448472 ROBO1Q9Y6N7 1651 aa16.92■□□□□ 0.3
CHRD-205ENST00000448472 NDUFB10O96000 172 aa16.92■□□□□ 0.3
CHRD-205ENST00000448472 SERPINB2P05120 415 aa16.92■□□□□ 0.3
CHRD-205ENST00000448472 BMP3P12645 472 aa16.92■□□□□ 0.3
CHRD-205ENST00000448472 PPP3CAQ08209 521 aa16.92■□□□□ 0.3
CHRD-205ENST00000448472 ZC3H3Q8IXZ2 948 aaKnown RBP16.92■□□□□ 0.3
CHRD-205ENST00000448472 ERP27Q96DN0 273 aa16.92■□□□□ 0.3
CHRD-205ENST00000448472 RMDN2Q96LZ7 410 aa16.92■□□□□ 0.3
CHRD-205ENST00000448472 RNASELQ05823 741 aaKnown RBP16.92■□□□□ 0.3
CHRD-205ENST00000448472 MTM1Q13496 603 aa16.92■□□□□ 0.3
CHRD-205ENST00000448472 ABCB5Q2M3G0 1257 aa16.92■□□□□ 0.3
CHRD-205ENST00000448472 CAPRIN2Q6IMN6 1127 aaKnown RBP16.92■□□□□ 0.3
CHRD-205ENST00000448472 LXNQ9BS40 222 aa16.92■□□□□ 0.3
CHRD-205ENST00000448472 TXLNGYQ9BZA5 131 aa16.92■□□□□ 0.3
CHRD-205ENST00000448472 VPS37BQ9H9H4 285 aa16.92■□□□□ 0.3
CHRD-205ENST00000448472 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.91■□□□□ 0.3
CHRD-205ENST00000448472 GH2P01242 217 aa16.91■□□□□ 0.3
CHRD-205ENST00000448472 IL1R1P14778 569 aa16.91■□□□□ 0.3
CHRD-205ENST00000448472 TARSP26639 723 aaKnown RBP16.91■□□□□ 0.3
CHRD-205ENST00000448472 ZNF131P52739 623 aa16.91■□□□□ 0.3
CHRD-205ENST00000448472 NOP9Q86U38 636 aaKnown RBP16.91■□□□□ 0.3
CHRD-205ENST00000448472 FAM84AQ96KN4 292 aa16.91■□□□□ 0.3
CHRD-205ENST00000448472 PCDHB18PQ96TA0 734 aa16.91■□□□□ 0.3
CHRD-205ENST00000448472 UBAP1LF5GYI3 381 aa16.91■□□□□ 0.3
CHRD-205ENST00000448472 TBX3O15119 743 aa16.91■□□□□ 0.3
CHRD-205ENST00000448472 DRG2P55039 364 aaKnown RBP16.91■□□□□ 0.3
CHRD-205ENST00000448472 IL9RQ01113 521 aa16.91■□□□□ 0.3
CHRD-205ENST00000448472 RRP1BQ14684 758 aaKnown RBP16.91■□□□□ 0.3
CHRD-205ENST00000448472 CCDC6Q16204 474 aa16.91■□□□□ 0.3
CHRD-205ENST00000448472 PCYOX1Q9UHG3 505 aa16.91■□□□□ 0.3
CHRD-205ENST00000448472 DLEC1Q9Y238 1755 aa16.91■□□□□ 0.3
CHRD-205ENST00000448472 STRCP1A6NGW2 1772 aa16.91■□□□□ 0.3
CHRD-205ENST00000448472 BTNL9Q6UXG8 535 aa16.91■□□□□ 0.3
CHRD-205ENST00000448472 TRMT10CQ7L0Y3 403 aaKnown RBP16.91■□□□□ 0.3
CHRD-205ENST00000448472 C4orf33Q8N1A6 199 aa16.91■□□□□ 0.3
CHRD-205ENST00000448472 ZSWIM2Q8NEG5 633 aa16.91■□□□□ 0.3
CHRD-205ENST00000448472 DHX38Q92620 1227 aaKnown RBP16.91■□□□□ 0.3
CHRD-205ENST00000448472 KLHL11Q9NVR0 708 aa16.91■□□□□ 0.3
CHRD-205ENST00000448472 EIF3DO15371 548 aaKnown RBP eCLIP16.9■□□□□ 0.35e-6■□□□□ 8.9
CHRD-205ENST00000448472 IFNB1P01574 187 aa16.9■□□□□ 0.3
CHRD-205ENST00000448472 CCND1P24385 295 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms