RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 IQCGQ9H095 443 aaKnown RBP10.06□□□□□ -0.8
SYNPO2-204ENST00000448416 UBN1Q9NPG3 1134 aa10.06□□□□□ -0.8
SYNPO2-204ENST00000448416 BMP2KQ9NSY1 1161 aaPredicted RBP10.06□□□□□ -0.8
SYNPO2-204ENST00000448416 SEPT11Q9NVA2 429 aaKnown RBP10.06□□□□□ -0.8
SYNPO2-204ENST00000448416 MTUS1Q9ULD2 1270 aa10.06□□□□□ -0.8
SYNPO2-204ENST00000448416 WASF2Q9Y6W5 498 aa10.06□□□□□ -0.8
SYNPO2-204ENST00000448416 UBR1Q8IWV7 1749 aa10.06□□□□□ -0.8
SYNPO2-204ENST00000448416 ATP8B3O60423 1300 aa10.06□□□□□ -0.8
SYNPO2-204ENST00000448416 ADGRA3Q8IWK6 1321 aa10.06□□□□□ -0.8
SYNPO2-204ENST00000448416 IGSF9BQ9UPX0 1349 aa10.06□□□□□ -0.8
SYNPO2-204ENST00000448416 TMEM110-MUSTN1A8MSY1 372 aa10.05□□□□□ -0.8
SYNPO2-204ENST00000448416 EDF1O60869 148 aaKnown RBP10.05□□□□□ -0.8
SYNPO2-204ENST00000448416 FGFR2P21802 821 aa10.05□□□□□ -0.8
SYNPO2-204ENST00000448416 COILP38432 576 aaPredicted RBP10.05□□□□□ -0.8
SYNPO2-204ENST00000448416 STAT1P42224 750 aa10.05□□□□□ -0.8
SYNPO2-204ENST00000448416 BCAMP50895 628 aa10.05□□□□□ -0.8
SYNPO2-204ENST00000448416 THOC5Q13769 683 aaKnown RBP10.05□□□□□ -0.8
SYNPO2-204ENST00000448416 DDB1Q16531 1140 aa10.05□□□□□ -0.8
SYNPO2-204ENST00000448416 TMEM266Q2M3C6 531 aa10.05□□□□□ -0.8
SYNPO2-204ENST00000448416 DCAF17Q5H9S7 520 aaPredicted RBP10.05□□□□□ -0.8
SYNPO2-204ENST00000448416 HAUS1Q96CS2 278 aa10.05□□□□□ -0.8
SYNPO2-204ENST00000448416 NMD3Q96D46 503 aaKnown RBP10.05□□□□□ -0.8
SYNPO2-204ENST00000448416 CLMNQ96JQ2 1002 aa10.05□□□□□ -0.8
SYNPO2-204ENST00000448416 CCDC77Q9BR77 488 aa10.05□□□□□ -0.8
SYNPO2-204ENST00000448416 ANGPTL2Q9UKU9 493 aa10.05□□□□□ -0.8
SYNPO2-204ENST00000448416 UMODL1Q5DID0 1318 aa10.05□□□□□ -0.8
SYNPO2-204ENST00000448416 CFAP69A5D8W1 941 aa10.05□□□□□ -0.8
SYNPO2-204ENST00000448416 PCP11498 1178 aaKnown RBP10.05□□□□□ -0.8
SYNPO2-204ENST00000448416 CTNNA2P26232 953 aa10.05□□□□□ -0.8
SYNPO2-204ENST00000448416 KRT79Q5XKE5 535 aa10.05□□□□□ -0.8
SYNPO2-204ENST00000448416 CCDC174Q6PII3 467 aa10.05□□□□□ -0.8
SYNPO2-204ENST00000448416 RFX8Q6ZV50 586 aa10.05□□□□□ -0.8
SYNPO2-204ENST00000448416 CLNKQ7Z7G1 428 aa10.05□□□□□ -0.8
SYNPO2-204ENST00000448416 C7orf43Q8WVR3 580 aa10.05□□□□□ -0.8
SYNPO2-204ENST00000448416 WDR60Q8WVS4 1066 aa10.05□□□□□ -0.8
SYNPO2-204ENST00000448416 FGFBP2Q9BYJ0 223 aa10.05□□□□□ -0.8
SYNPO2-204ENST00000448416 DDX43Q9NXZ2 648 aaKnown RBP10.05□□□□□ -0.8
SYNPO2-204ENST00000448416 ALG6Q9Y672 507 aa10.05□□□□□ -0.8
SYNPO2-204ENST00000448416 MAGEB2O15479 319 aa10.05□□□□□ -0.8
SYNPO2-204ENST00000448416 ZNF189O75820 626 aaPredicted RBP10.05□□□□□ -0.8
SYNPO2-204ENST00000448416 ALAS1P13196 640 aa10.05□□□□□ -0.8
SYNPO2-204ENST00000448416 LMNB1P20700 586 aa10.05□□□□□ -0.8
SYNPO2-204ENST00000448416 NR2F2P24468 414 aa10.05□□□□□ -0.8
SYNPO2-204ENST00000448416 CHKAP35790 457 aa10.05□□□□□ -0.8
SYNPO2-204ENST00000448416 DYNLL1P63167 89 aaKnown RBP10.05□□□□□ -0.8
SYNPO2-204ENST00000448416 DSG1Q02413 1049 aa10.05□□□□□ -0.8
SYNPO2-204ENST00000448416 TMED2Q15363 201 aa10.05□□□□□ -0.8
SYNPO2-204ENST00000448416 GJB7Q6PEY0 223 aa10.05□□□□□ -0.8
SYNPO2-204ENST00000448416 KCNK18Q7Z418 384 aa10.05□□□□□ -0.8
SYNPO2-204ENST00000448416 ZDHHC14Q8IZN3 488 aa10.05□□□□□ -0.8
SYNPO2-204ENST00000448416 LNX1Q8TBB1 728 aaPredicted RBP10.05□□□□□ -0.8
SYNPO2-204ENST00000448416 FNBP1Q96RU3 617 aa10.05□□□□□ -0.8
SYNPO2-204ENST00000448416 AAASQ9NRG9 546 aa10.05□□□□□ -0.8
SYNPO2-204ENST00000448416 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.05□□□□□ -0.8
SYNPO2-204ENST00000448416 ASIC3Q9UHC3 531 aa10.05□□□□□ -0.8
SYNPO2-204ENST00000448416 NUP188Q5SRE5 1749 aa10.05□□□□□ -0.8
SYNPO2-204ENST00000448416 ASMTLO95671 621 aa10.04□□□□□ -0.8
SYNPO2-204ENST00000448416 CETPP11597 493 aa10.04□□□□□ -0.8
SYNPO2-204ENST00000448416 PPP2R5CQ13362 524 aa10.04□□□□□ -0.8
SYNPO2-204ENST00000448416 R3HDM1Q15032 1099 aaKnown RBP10.04□□□□□ -0.8
SYNPO2-204ENST00000448416 ZNF568Q3ZCX4 644 aa10.04□□□□□ -0.8
SYNPO2-204ENST00000448416 SPDYAQ5MJ70 313 aa10.04□□□□□ -0.8
SYNPO2-204ENST00000448416 KRT35Q92764 455 aa10.04□□□□□ -0.8
SYNPO2-204ENST00000448416 ARHGEF26Q96DR7 871 aa10.04□□□□□ -0.8
SYNPO2-204ENST00000448416 POP1Q99575 1024 aaKnown RBP10.04□□□□□ -0.8
SYNPO2-204ENST00000448416 NPHS2Q9NP85 383 aa10.04□□□□□ -0.8
SYNPO2-204ENST00000448416 BARHL2Q9NY43 387 aa10.04□□□□□ -0.8
SYNPO2-204ENST00000448416 NCANO14594 1321 aa10.04□□□□□ -0.8
SYNPO2-204ENST00000448416 POTEMA6NI47 508 aa10.04□□□□□ -0.8
SYNPO2-204ENST00000448416 IRS4O14654 1257 aaPredicted RBP10.04□□□□□ -0.8
SYNPO2-204ENST00000448416 PABPC4LP0CB38 370 aaKnown RBP10.04□□□□□ -0.8
SYNPO2-204ENST00000448416 NAPAP54920 295 aa10.04□□□□□ -0.8
SYNPO2-204ENST00000448416 CBX3Q13185 183 aa10.04□□□□□ -0.8
SYNPO2-204ENST00000448416 CALCRLQ16602 461 aa10.04□□□□□ -0.8
SYNPO2-204ENST00000448416 HERC4Q5GLZ8 1057 aaPredicted RBP10.04□□□□□ -0.8
SYNPO2-204ENST00000448416 RBM26Q5T8P6 1007 aaKnown RBP10.04□□□□□ -0.8
SYNPO2-204ENST00000448416 FYB2Q5VWT5 728 aa10.04□□□□□ -0.8
SYNPO2-204ENST00000448416 KIF6Q6ZMV9 814 aa10.04□□□□□ -0.8
SYNPO2-204ENST00000448416 AGBL1Q96MI9 1066 aa10.04□□□□□ -0.8
SYNPO2-204ENST00000448416 SMC6Q96SB8 1091 aa10.04□□□□□ -0.8
SYNPO2-204ENST00000448416 RAB34Q9BZG1 259 aa10.04□□□□□ -0.8
SYNPO2-204ENST00000448416 ZHX3Q9H4I2 956 aa10.04□□□□□ -0.8
SYNPO2-204ENST00000448416 HSFX1Q9UBD0 423 aa10.04□□□□□ -0.8
SYNPO2-204ENST00000448416 AJAP1Q9UKB5 411 aaPredicted RBP10.04□□□□□ -0.8
SYNPO2-204ENST00000448416 DUOX1Q9NRD9 1551 aa10.04□□□□□ -0.8
SYNPO2-204ENST00000448416 HAUS5O94927 633 aa10.04□□□□□ -0.8
SYNPO2-204ENST00000448416 XRCC5P13010 732 aaKnown RBP10.04□□□□□ -0.8
SYNPO2-204ENST00000448416 PABPC4Q13310 644 aaKnown RBP eCLIP10.04□□□□□ -0.8
SYNPO2-204ENST00000448416 TMED1Q13445 227 aa10.04□□□□□ -0.8
SYNPO2-204ENST00000448416 DPY19L2P1Q6NXN4 242 aa10.04□□□□□ -0.8
SYNPO2-204ENST00000448416 MROH5Q6ZUA9 1318 aa10.04□□□□□ -0.8
SYNPO2-204ENST00000448416 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.04□□□□□ -0.8
SYNPO2-204ENST00000448416 TBCKQ8TEA7 893 aa10.04□□□□□ -0.8
SYNPO2-204ENST00000448416 SNRNP27Q8WVK2 155 aaKnown RBP10.04□□□□□ -0.8
SYNPO2-204ENST00000448416 NUDT12Q9BQG2 462 aa10.04□□□□□ -0.8
SYNPO2-204ENST00000448416 EMILIN3Q9NT22 766 aa10.04□□□□□ -0.8
SYNPO2-204ENST00000448416 CLIC5Q9NZA1 410 aa10.04□□□□□ -0.8
SYNPO2-204ENST00000448416 DCTN4Q9UJW0 460 aa10.04□□□□□ -0.8
SYNPO2-204ENST00000448416 PAIP2BQ9ULR5 123 aaKnown RBP10.04□□□□□ -0.8
SYNPO2-204ENST00000448416 SUGT1Q9Y2Z0 365 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms