RNA–Protein interactions for RNA: ENST00000447995.2

PTPN12-208, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-208ENST00000447995 ERCC6LQ2NKX8 1250 aa4.48□□□□□ -1.69
PTPN12-208ENST00000447995 CERKLQ49MI3 558 aaPredicted RBP4.48□□□□□ -1.69
PTPN12-208ENST00000447995 TMEM119Q4V9L6 283 aa4.48□□□□□ -1.69
PTPN12-208ENST00000447995 HYIQ5T013 277 aa4.48□□□□□ -1.69
PTPN12-208ENST00000447995 HAUS3Q68CZ6 603 aa4.48□□□□□ -1.69
PTPN12-208ENST00000447995 SLFN13Q68D06 897 aa4.48□□□□□ -1.69
PTPN12-208ENST00000447995 ZNF772Q68DY9 489 aaPredicted RBP4.48□□□□□ -1.69
PTPN12-208ENST00000447995 CENPPQ6IPU0 288 aa4.48□□□□□ -1.69
PTPN12-208ENST00000447995 APOBEC3HQ6NTF7 200 aaKnown RBP4.48□□□□□ -1.69
PTPN12-208ENST00000447995 FBXO38Q6PIJ6 1188 aa4.48□□□□□ -1.69
PTPN12-208ENST00000447995 TMCO3Q6UWJ1 677 aa4.48□□□□□ -1.69
PTPN12-208ENST00000447995 RAD9BQ6WBX8 426 aa4.48□□□□□ -1.69
PTPN12-208ENST00000447995 ZNF662Q6ZS27 426 aa4.48□□□□□ -1.69
PTPN12-208ENST00000447995 TMEM179Q6ZVK1 233 aa4.48□□□□□ -1.69
PTPN12-208ENST00000447995 FAM214BQ7L5A3 538 aa4.48□□□□□ -1.69
PTPN12-208ENST00000447995 C2CD5Q86YS7 1000 aa4.48□□□□□ -1.69
PTPN12-208ENST00000447995 SULF2Q8IWU5 870 aa4.48□□□□□ -1.69
PTPN12-208ENST00000447995 SPACA3Q8IXA5 215 aa4.48□□□□□ -1.69
PTPN12-208ENST00000447995 CCDC65Q8IXS2 484 aa4.48□□□□□ -1.69
PTPN12-208ENST00000447995 SLFN12Q8IYM2 578 aa4.48□□□□□ -1.69
PTPN12-208ENST00000447995 CCDC170Q8IYT3 715 aa4.48□□□□□ -1.69
PTPN12-208ENST00000447995 ADGRF4Q8IZF3 695 aa4.48□□□□□ -1.69
PTPN12-208ENST00000447995 LRRC47Q8N1G4 583 aaKnown RBP4.48□□□□□ -1.69
PTPN12-208ENST00000447995 CERS5Q8N5B7 392 aa4.48□□□□□ -1.69
PTPN12-208ENST00000447995 GMCL1P1Q8NEA9 526 aa4.48□□□□□ -1.69
PTPN12-208ENST00000447995 BHLHE22Q8NFJ8 381 aaPredicted RBP4.48□□□□□ -1.69
PTPN12-208ENST00000447995 LARP4BQ92615 738 aaKnown RBP4.48□□□□□ -1.69
PTPN12-208ENST00000447995 RABGGTAQ92696 567 aa4.48□□□□□ -1.69
PTPN12-208ENST00000447995 ZNF622Q969S3 477 aaKnown RBP eCLIP4.48□□□□□ -1.693e-6■□□□□ 9.4
PTPN12-208ENST00000447995 COA7Q96BR5 231 aa4.48□□□□□ -1.69
PTPN12-208ENST00000447995 FAM84AQ96KN4 292 aa4.48□□□□□ -1.69
PTPN12-208ENST00000447995 CNOT6LQ96LI5 555 aaKnown RBP4.48□□□□□ -1.69
PTPN12-208ENST00000447995 ERGIC2Q96RQ1 377 aa4.48□□□□□ -1.69
PTPN12-208ENST00000447995 DNAJC7Q99615 494 aa4.48□□□□□ -1.69
PTPN12-208ENST00000447995 SLC38A3Q99624 504 aa4.48□□□□□ -1.69
PTPN12-208ENST00000447995 NAPGQ99747 312 aaPredicted RBP4.48□□□□□ -1.69
PTPN12-208ENST00000447995 DUSP9Q99956 384 aaKnown RBP4.48□□□□□ -1.69
PTPN12-208ENST00000447995 TUBGCP2Q9BSJ2 902 aa4.48□□□□□ -1.69
PTPN12-208ENST00000447995 DESI2Q9BSY9 194 aa4.48□□□□□ -1.69
PTPN12-208ENST00000447995 NOC4LQ9BVI4 516 aaKnown RBP4.48□□□□□ -1.69
PTPN12-208ENST00000447995 CARD6Q9BX69 1037 aa4.48□□□□□ -1.69
PTPN12-208ENST00000447995 EDEM3Q9BZQ6 932 aa4.48□□□□□ -1.69
PTPN12-208ENST00000447995 TSGA10Q9BZW7 698 aa4.48□□□□□ -1.69
PTPN12-208ENST00000447995 GBP3Q9H0R5 595 aa4.48□□□□□ -1.69
PTPN12-208ENST00000447995 HAUS4Q9H6D7 363 aa4.48□□□□□ -1.69
PTPN12-208ENST00000447995 EHMT1Q9H9B1 1298 aa4.48□□□□□ -1.69
PTPN12-208ENST00000447995 LZTFL1Q9NQ48 299 aa4.48□□□□□ -1.69
PTPN12-208ENST00000447995 DDX4Q9NQI0 724 aaKnown RBP4.48□□□□□ -1.69
PTPN12-208ENST00000447995 TMEM260Q9NX78 707 aa4.48□□□□□ -1.69
PTPN12-208ENST00000447995 TMOD2Q9NZR1 351 aa4.48□□□□□ -1.69
PTPN12-208ENST00000447995 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.48□□□□□ -1.69
PTPN12-208ENST00000447995 DDX25Q9UHL0 483 aaKnown RBP4.48□□□□□ -1.69
PTPN12-208ENST00000447995 CDC23Q9UJX2 597 aa4.48□□□□□ -1.69
PTPN12-208ENST00000447995 SNX11Q9Y5W9 270 aa4.48□□□□□ -1.69
PTPN12-208ENST00000447995 V9GYY5 206 aaPredicted RBP4.48□□□□□ -1.69
PTPN12-208ENST00000447995 NRXN2Q9P2S2 1712 aa4.48□□□□□ -1.69
PTPN12-208ENST00000447995 COL2A1P02458 1487 aaPredicted RBP4.48□□□□□ -1.69
PTPN12-208ENST00000447995 CDK5RAP2Q96SN8 1893 aa4.47□□□□□ -1.69
PTPN12-208ENST00000447995 CYP3A7-CYP3A51PA0A087WV96 503 aa4.47□□□□□ -1.69
PTPN12-208ENST00000447995 TTC26A0AVF1 554 aa4.47□□□□□ -1.69
PTPN12-208ENST00000447995 TRIM49BA6NDI0 452 aa4.47□□□□□ -1.69
PTPN12-208ENST00000447995 B4DLN1 442 aa4.47□□□□□ -1.69
PTPN12-208ENST00000447995 KRT86O43790 486 aa4.47□□□□□ -1.69
PTPN12-208ENST00000447995 ECE2O60344 883 aa4.47□□□□□ -1.69
PTPN12-208ENST00000447995 USO1O60763 962 aaKnown RBP4.47□□□□□ -1.69
PTPN12-208ENST00000447995 ERLIN1O75477 346 aa4.47□□□□□ -1.69
PTPN12-208ENST00000447995 NDUFA10O95299 355 aa4.47□□□□□ -1.69
PTPN12-208ENST00000447995 TDP2O95551 362 aa4.47□□□□□ -1.69
PTPN12-208ENST00000447995 IDEP14735 1019 aa4.47□□□□□ -1.69
PTPN12-208ENST00000447995 CYP3A7P24462 503 aa4.47□□□□□ -1.69
PTPN12-208ENST00000447995 MCM3P25205 808 aa4.47□□□□□ -1.69
PTPN12-208ENST00000447995 NTF4P34130 210 aa4.47□□□□□ -1.69
PTPN12-208ENST00000447995 RBM5P52756 815 aaKnown RBP eCLIP4.47□□□□□ -1.69
PTPN12-208ENST00000447995 EIF6P56537 245 aaKnown RBP4.47□□□□□ -1.69
PTPN12-208ENST00000447995 CHMP4BP1P59074 171 aa4.47□□□□□ -1.69
PTPN12-208ENST00000447995 ERVK-24P63145 666 aa4.47□□□□□ -1.69
PTPN12-208ENST00000447995 CBX1P83916 185 aa4.47□□□□□ -1.69
PTPN12-208ENST00000447995 ICA1Q05084 483 aa4.47□□□□□ -1.69
PTPN12-208ENST00000447995 CKAP4Q07065 602 aaKnown RBP4.47□□□□□ -1.69
PTPN12-208ENST00000447995 PDE4CQ08493 712 aa4.47□□□□□ -1.69
PTPN12-208ENST00000447995 STK4Q13043 487 aa4.47□□□□□ -1.69
PTPN12-208ENST00000447995 GPS2Q13227 327 aa4.47□□□□□ -1.69
PTPN12-208ENST00000447995 GRB10Q13322 594 aa4.47□□□□□ -1.69
PTPN12-208ENST00000447995 MTF1Q14872 753 aa4.47□□□□□ -1.69
PTPN12-208ENST00000447995 BRD3Q15059 726 aa4.47□□□□□ -1.69
PTPN12-208ENST00000447995 SPA17Q15506 151 aa4.47□□□□□ -1.69
PTPN12-208ENST00000447995 CDC37Q16543 378 aaPredicted RBP4.47□□□□□ -1.69
PTPN12-208ENST00000447995 MAN2A1Q16706 1144 aa4.47□□□□□ -1.69
PTPN12-208ENST00000447995 PTPN21Q16825 1174 aa4.47□□□□□ -1.69
PTPN12-208ENST00000447995 ABCB5Q2M3G0 1257 aa4.47□□□□□ -1.69
PTPN12-208ENST00000447995 QRICH1Q2TAL8 776 aa4.47□□□□□ -1.69
PTPN12-208ENST00000447995 KRTAP19-4Q3LI73 84 aa4.47□□□□□ -1.69
PTPN12-208ENST00000447995 VWA3BQ502W6 1294 aa4.47□□□□□ -1.69
PTPN12-208ENST00000447995 ZC3H12AQ5D1E8 599 aaKnown RBP4.47□□□□□ -1.69
PTPN12-208ENST00000447995 ZNF569Q5MCW4 686 aa4.47□□□□□ -1.69
PTPN12-208ENST00000447995 DACT2Q5SW24 774 aa4.47□□□□□ -1.69
PTPN12-208ENST00000447995 TEX35Q5T0J7 233 aa4.47□□□□□ -1.69
PTPN12-208ENST00000447995 UTP14CQ5TAP6 766 aaKnown RBP4.47□□□□□ -1.69
PTPN12-208ENST00000447995 ANKRD40Q6AI12 368 aa4.47□□□□□ -1.69
PTPN12-208ENST00000447995 IQCEQ6IPM2 695 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms