RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 SFPQP23246 707 aaKnown RBP eCLIP27.08■■□□□ 1.93
RFFL-206ENST00000447669 GCLMP48507 274 aa27.08■■□□□ 1.93
RFFL-206ENST00000447669 GSDMDP57764 484 aa27.08■■□□□ 1.93
RFFL-206ENST00000447669 OSTNP61366 133 aa27.08■■□□□ 1.93
RFFL-206ENST00000447669 LMBRD2Q68DH5 695 aaPredicted RBP27.08■■□□□ 1.93
RFFL-206ENST00000447669 TSHZ1Q6ZSZ6 1077 aa27.08■■□□□ 1.93
RFFL-206ENST00000447669 PTPRHQ9HD43 1115 aa27.08■■□□□ 1.93
RFFL-206ENST00000447669 TRMT13Q9NUP7 481 aaKnown RBP27.08■■□□□ 1.93
RFFL-206ENST00000447669 PRMT7Q9NVM4 692 aaPredicted RBP27.08■■□□□ 1.93
RFFL-206ENST00000447669 PYCARDQ9ULZ3 195 aa27.08■■□□□ 1.93
RFFL-206ENST00000447669 TRIM21P19474 475 aaKnown RBP27.07■■□□□ 1.92
RFFL-206ENST00000447669 CYP24A1Q07973 514 aa27.07■■□□□ 1.92
RFFL-206ENST00000447669 SLFN12LQ6IEE8 588 aa27.07■■□□□ 1.92
RFFL-206ENST00000447669 ZNF410Q86VK4 478 aa27.07■■□□□ 1.92
RFFL-206ENST00000447669 DEFB118Q96PH6 123 aa27.07■■□□□ 1.92
RFFL-206ENST00000447669 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP27.07■■□□□ 1.92
RFFL-206ENST00000447669 DLATP10515 647 aaKnown RBP27.07■■□□□ 1.92
RFFL-206ENST00000447669 FMO5P49326 533 aa27.07■■□□□ 1.92
RFFL-206ENST00000447669 HS1BP3Q53T59 392 aa27.07■■□□□ 1.92
RFFL-206ENST00000447669 MFSD14AQ96MC6 490 aa27.07■■□□□ 1.92
RFFL-206ENST00000447669 LSM14BQ9BX40 385 aaKnown RBP27.07■■□□□ 1.92
RFFL-206ENST00000447669 TTYH3Q9C0H2 523 aa27.07■■□□□ 1.92
RFFL-206ENST00000447669 LRRIQ3A6PVS8 624 aaPredicted RBP27.06■■□□□ 1.92
RFFL-206ENST00000447669 AKR1B15C9JRZ8 316 aaPredicted RBP27.06■■□□□ 1.92
RFFL-206ENST00000447669 FAM189A1O60320 539 aa27.06■■□□□ 1.92
RFFL-206ENST00000447669 TSPAN1O60635 241 aa27.06■■□□□ 1.92
RFFL-206ENST00000447669 PROZP22891 400 aa27.06■■□□□ 1.92
RFFL-206ENST00000447669 CCZ1BP86790 482 aa27.06■■□□□ 1.92
RFFL-206ENST00000447669 CCZ1P86791 482 aaPredicted RBP27.06■■□□□ 1.92
RFFL-206ENST00000447669 ZNF568Q3ZCX4 644 aa27.06■■□□□ 1.92
RFFL-206ENST00000447669 TMEM192Q8IY95 271 aa27.06■■□□□ 1.92
RFFL-206ENST00000447669 THNSL1Q8IYQ7 743 aa27.06■■□□□ 1.92
RFFL-206ENST00000447669 PARD3BQ8TEW8 1205 aa27.06■■□□□ 1.92
RFFL-206ENST00000447669 UTP3Q9NQZ2 479 aaKnown RBP eCLIP27.06■■□□□ 1.929e-9■■■■■ 111.8
RFFL-206ENST00000447669 ZNF233A6NK53 670 aa27.06■■□□□ 1.92
RFFL-206ENST00000447669 CTSHP09668 335 aa27.06■■□□□ 1.92
RFFL-206ENST00000447669 PTGISQ16647 500 aa27.06■■□□□ 1.92
RFFL-206ENST00000447669 FAM187BQ17R55 369 aa27.06■■□□□ 1.92
RFFL-206ENST00000447669 GCOM2Q9BZD3 368 aaPredicted RBP27.06■■□□□ 1.92
RFFL-206ENST00000447669 RNF208Q9H0X6 261 aa27.06■■□□□ 1.92
RFFL-206ENST00000447669 PDE11AQ9HCR9 933 aa27.06■■□□□ 1.92
RFFL-206ENST00000447669 A0A1W2PQ45 241 aaPredicted RBP27.05■■□□□ 1.92
RFFL-206ENST00000447669 A0A1W2PQY0 241 aa27.05■■□□□ 1.92
RFFL-206ENST00000447669 MFAP3LO75121 409 aa27.05■■□□□ 1.92
RFFL-206ENST00000447669 NOL4O94818 638 aa27.05■■□□□ 1.92
RFFL-206ENST00000447669 MCL1Q07820 350 aa27.05■■□□□ 1.92
RFFL-206ENST00000447669 MPZL3Q6UWV2 235 aa27.05■■□□□ 1.92
RFFL-206ENST00000447669 C17orf53Q8N3J3 647 aaPredicted RBP27.05■■□□□ 1.92
RFFL-206ENST00000447669 ELMO3Q96BJ8 720 aa27.05■■□□□ 1.92
RFFL-206ENST00000447669 CDT1Q9H211 546 aa27.05■■□□□ 1.92
RFFL-206ENST00000447669 PDZD7Q9H5P4 517 aa27.05■■□□□ 1.92
RFFL-206ENST00000447669 MAPK13O15264 365 aa27.04■■□□□ 1.92
RFFL-206ENST00000447669 ERLIN2O94905 339 aa27.04■■□□□ 1.92
RFFL-206ENST00000447669 CCL5P13501 91 aa27.04■■□□□ 1.92
RFFL-206ENST00000447669 DARSP14868 501 aaKnown RBP27.04■■□□□ 1.92
RFFL-206ENST00000447669 NOLC1Q14978 699 aaKnown RBP eCLIP27.04■■□□□ 1.92
RFFL-206ENST00000447669 SRGAP1Q7Z6B7 1085 aa27.04■■□□□ 1.92
RFFL-206ENST00000447669 CCDC150Q8NCX0 1101 aa27.04■■□□□ 1.92
RFFL-206ENST00000447669 GLT1D1Q96MS3 346 aa27.04■■□□□ 1.92
RFFL-206ENST00000447669 OSBPL7Q9BZF2 842 aa27.04■■□□□ 1.92
RFFL-206ENST00000447669 TNFSF13BQ9Y275 285 aa27.04■■□□□ 1.92
RFFL-206ENST00000447669 CNTNAP2Q9UHC6 1331 aa27.04■■□□□ 1.92
RFFL-206ENST00000447669 PON1P27169 355 aa27.04■■□□□ 1.92
RFFL-206ENST00000447669 KRT9P35527 623 aa27.04■■□□□ 1.92
RFFL-206ENST00000447669 PPP2R3AQ06190 1150 aa27.04■■□□□ 1.92
RFFL-206ENST00000447669 SNX17Q15036 470 aa27.04■■□□□ 1.92
RFFL-206ENST00000447669 DPY19L2P1Q6NXN4 242 aa27.04■■□□□ 1.92
RFFL-206ENST00000447669 SERINC5Q86VE9 423 aa27.04■■□□□ 1.92
RFFL-206ENST00000447669 PAK6Q9NQU5 681 aaPredicted RBP27.04■■□□□ 1.92
RFFL-206ENST00000447669 RBAKQ9NYW8 714 aaPredicted RBP27.04■■□□□ 1.92
RFFL-206ENST00000447669 GCNT4Q9P109 453 aa27.04■■□□□ 1.92
RFFL-206ENST00000447669 ZKSCAN5Q9Y2L8 839 aa27.04■■□□□ 1.92
RFFL-206ENST00000447669 PTPRJQ12913 1337 aa27.03■■□□□ 1.92
RFFL-206ENST00000447669 HSPA8P11142 646 aaKnown RBP27.03■■□□□ 1.92
RFFL-206ENST00000447669 EIF4BP23588 611 aaKnown RBP27.03■■□□□ 1.92
RFFL-206ENST00000447669 HOXA11P31270 313 aaPredicted RBP27.03■■□□□ 1.92
RFFL-206ENST00000447669 LBX1P52954 281 aa27.03■■□□□ 1.92
RFFL-206ENST00000447669 EXOC3L4Q17RC7 722 aa27.03■■□□□ 1.92
RFFL-206ENST00000447669 ZNF516Q92618 1163 aa27.03■■□□□ 1.92
RFFL-206ENST00000447669 NLRC4Q9NPP4 1024 aa27.03■■□□□ 1.92
RFFL-206ENST00000447669 MOXD2PA6NHM9 499 aa27.02■■□□□ 1.92
RFFL-206ENST00000447669 SKILP12757 684 aa27.02■■□□□ 1.92
RFFL-206ENST00000447669 TAF2Q6P1X5 1199 aa27.02■■□□□ 1.92
RFFL-206ENST00000447669 GJB7Q6PEY0 223 aa27.02■■□□□ 1.92
RFFL-206ENST00000447669 CATSPER4Q7RTX7 472 aa27.02■■□□□ 1.92
RFFL-206ENST00000447669 FAM212AQ96EL1 285 aa27.02■■□□□ 1.92
RFFL-206ENST00000447669 TMEM117Q9H0C3 514 aa27.02■■□□□ 1.92
RFFL-206ENST00000447669 CAPN11Q9UMQ6 739 aa27.02■■□□□ 1.92
RFFL-206ENST00000447669 CDY2AQ9Y6F7 541 aa27.02■■□□□ 1.92
RFFL-206ENST00000447669 MYL7Q01449 175 aa27.02■■□□□ 1.92
RFFL-206ENST00000447669 SCARA3Q6AZY7 606 aa27.02■■□□□ 1.92
RFFL-206ENST00000447669 SESTD1Q86VW0 696 aa27.02■■□□□ 1.92
RFFL-206ENST00000447669 TMEM139Q8IV31 216 aa27.02■■□□□ 1.92
RFFL-206ENST00000447669 NEK11Q8NG66 645 aa27.02■■□□□ 1.92
RFFL-206ENST00000447669 PRIMPOLQ96LW4 560 aa27.02■■□□□ 1.92
RFFL-206ENST00000447669 TRPV6Q9H1D0 765 aa27.02■■□□□ 1.92
RFFL-206ENST00000447669 OGTO15294 1046 aa27.01■■□□□ 1.91
RFFL-206ENST00000447669 CHRNA1P02708 482 aa27.01■■□□□ 1.91
RFFL-206ENST00000447669 GBP6Q6ZN66 633 aa27.01■■□□□ 1.91
RFFL-206ENST00000447669 ARRDC4Q8NCT1 418 aa27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms