RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 HES2Q9Y543 173 aa27.14■■□□□ 1.94
PMS1-214ENST00000446877 CTTNQ14247 550 aaKnown RBP27.13■■□□□ 1.93
PMS1-214ENST00000446877 USP41Q3LFD5 358 aa27.13■■□□□ 1.93
PMS1-214ENST00000446877 TPH2Q8IWU9 490 aa27.13■■□□□ 1.93
PMS1-214ENST00000446877 ZNF707Q96C28 371 aaPredicted RBP27.13■■□□□ 1.93
PMS1-214ENST00000446877 DYDC2Q96IM9 177 aa27.13■■□□□ 1.93
PMS1-214ENST00000446877 CPB2Q96IY4 423 aa27.13■■□□□ 1.93
PMS1-214ENST00000446877 NT5C3AQ9H0P0 336 aa27.13■■□□□ 1.93
PMS1-214ENST00000446877 TBC1D17Q9HA65 648 aa27.13■■□□□ 1.93
PMS1-214ENST00000446877 CHST7Q9NS84 486 aa27.13■■□□□ 1.93
PMS1-214ENST00000446877 MIOSQ9NXC5 875 aa27.13■■□□□ 1.93
PMS1-214ENST00000446877 ZDHHC7Q9NXF8 308 aa27.13■■□□□ 1.93
PMS1-214ENST00000446877 CDKL5O76039 1030 aa27.12■■□□□ 1.93
PMS1-214ENST00000446877 BAG4O95429 457 aaKnown RBP27.12■■□□□ 1.93
PMS1-214ENST00000446877 EFEMP2O95967 443 aa27.12■■□□□ 1.93
PMS1-214ENST00000446877 LMNAP02545 664 aaKnown RBP27.12■■□□□ 1.93
PMS1-214ENST00000446877 CYP4A11Q02928 519 aa27.12■■□□□ 1.93
PMS1-214ENST00000446877 SLFN12Q8IYM2 578 aa27.12■■□□□ 1.93
PMS1-214ENST00000446877 HAS1Q92839 578 aa27.12■■□□□ 1.93
PMS1-214ENST00000446877 PHF20Q9BVI0 1012 aa27.12■■□□□ 1.93
PMS1-214ENST00000446877 DENND4AQ7Z401 1863 aa27.12■■□□□ 1.93
PMS1-214ENST00000446877 TGM5O43548 720 aa27.11■■□□□ 1.93
PMS1-214ENST00000446877 LAMP2P13473 410 aa27.11■■□□□ 1.93
PMS1-214ENST00000446877 CREMQ03060 361 aa27.11■■□□□ 1.93
PMS1-214ENST00000446877 POU5F1BQ06416 359 aa27.11■■□□□ 1.93
PMS1-214ENST00000446877 PIK3AP1Q6ZUJ8 805 aa27.11■■□□□ 1.93
PMS1-214ENST00000446877 GPR65Q8IYL9 337 aa27.11■■□□□ 1.93
PMS1-214ENST00000446877 GPR152Q8TDT2 470 aa27.11■■□□□ 1.93
PMS1-214ENST00000446877 B3GALT6Q96L58 329 aa27.11■■□□□ 1.93
PMS1-214ENST00000446877 PRKD2Q9BZL6 878 aa27.11■■□□□ 1.93
PMS1-214ENST00000446877 F8W810 466 aa27.1■■□□□ 1.93
PMS1-214ENST00000446877 ZBTB39O15060 712 aa27.1■■□□□ 1.93
PMS1-214ENST00000446877 SPECC1Q5M775 1068 aa27.1■■□□□ 1.93
PMS1-214ENST00000446877 FUT10Q6P4F1 479 aa27.1■■□□□ 1.93
PMS1-214ENST00000446877 GET4Q7L5D6 327 aaPredicted RBP27.1■■□□□ 1.93
PMS1-214ENST00000446877 RIN2Q8WYP3 895 aaPredicted RBP27.1■■□□□ 1.93
PMS1-214ENST00000446877 CCDC43Q96MW1 224 aaKnown RBP27.1■■□□□ 1.93
PMS1-214ENST00000446877 GPR62Q9BZJ7 368 aa27.1■■□□□ 1.93
PMS1-214ENST00000446877 FNIP2Q9P278 1114 aa27.1■■□□□ 1.93
PMS1-214ENST00000446877 SIT1Q9Y3P8 196 aa27.1■■□□□ 1.93
PMS1-214ENST00000446877 EP300Q09472 2414 aaPredicted RBP27.09■■□□□ 1.93
PMS1-214ENST00000446877 TADA2AO75478 443 aa27.09■■□□□ 1.93
PMS1-214ENST00000446877 PHLDB3Q6NSJ2 640 aa27.09■■□□□ 1.93
PMS1-214ENST00000446877 POTEDQ86YR6 584 aa27.09■■□□□ 1.93
PMS1-214ENST00000446877 GLYCTKQ8IVS8 523 aa27.09■■□□□ 1.93
PMS1-214ENST00000446877 ARHGEF3Q9NR81 526 aa27.09■■□□□ 1.93
PMS1-214ENST00000446877 ADAM28Q9UKQ2 775 aa27.09■■□□□ 1.93
PMS1-214ENST00000446877 SLITRK3O94933 977 aa27.08■■□□□ 1.93
PMS1-214ENST00000446877 PAPLNO95428 1278 aa27.08■■□□□ 1.93
PMS1-214ENST00000446877 ARF4P18085 180 aaPredicted RBP27.08■■□□□ 1.93
PMS1-214ENST00000446877 AKAP5P24588 427 aa27.08■■□□□ 1.93
PMS1-214ENST00000446877 MBTD1Q05BQ5 628 aa27.08■■□□□ 1.93
PMS1-214ENST00000446877 IFNLR1Q8IU57 520 aaPredicted RBP27.08■■□□□ 1.93
PMS1-214ENST00000446877 TM6SF1Q9BZW5 370 aa27.08■■□□□ 1.93
PMS1-214ENST00000446877 NXF3Q9H4D5 531 aaKnown RBP27.08■■□□□ 1.93
PMS1-214ENST00000446877 XPNPEP1Q9NQW7 623 aa27.08■■□□□ 1.93
PMS1-214ENST00000446877 R4GN57 208 aa27.08■■□□□ 1.93
PMS1-214ENST00000446877 ZNF292O60281 2723 aa27.07■■□□□ 1.92
PMS1-214ENST00000446877 DGAT1O75907 488 aa27.07■■□□□ 1.92
PMS1-214ENST00000446877 DCNP07585 359 aaKnown RBP27.07■■□□□ 1.92
PMS1-214ENST00000446877 LILRA6Q6PI73 481 aa27.07■■□□□ 1.92
PMS1-214ENST00000446877 DCLRE1AQ6PJP8 1040 aa27.07■■□□□ 1.92
PMS1-214ENST00000446877 ZC3H14Q6PJT7 736 aaKnown RBP27.07■■□□□ 1.92
PMS1-214ENST00000446877 PDRG1Q9NUG6 133 aa27.07■■□□□ 1.92
PMS1-214ENST00000446877 PARP2Q9UGN5 583 aa27.07■■□□□ 1.92
PMS1-214ENST00000446877 ZFP37Q9Y6Q3 630 aaPredicted RBP27.07■■□□□ 1.92
PMS1-214ENST00000446877 DCHS1Q96JQ0 3298 aa27.07■■□□□ 1.92
PMS1-214ENST00000446877 ANHXE9PGG2 379 aa27.06■■□□□ 1.92
PMS1-214ENST00000446877 EPB41L2O43491 1005 aaKnown RBP27.06■■□□□ 1.92
PMS1-214ENST00000446877 ZMYND10O75800 440 aa27.06■■□□□ 1.92
PMS1-214ENST00000446877 RPL17P18621 184 aaKnown RBP27.06■■□□□ 1.92
PMS1-214ENST00000446877 FSHRP23945 695 aa27.06■■□□□ 1.92
PMS1-214ENST00000446877 SPIRE1Q08AE8 756 aa27.06■■□□□ 1.92
PMS1-214ENST00000446877 GRIK3Q13003 919 aa27.06■■□□□ 1.92
PMS1-214ENST00000446877 HTR4Q13639 388 aa27.06■■□□□ 1.92
PMS1-214ENST00000446877 CAPSQ13938 189 aa27.06■■□□□ 1.92
PMS1-214ENST00000446877 AMHR2Q16671 573 aa27.06■■□□□ 1.92
PMS1-214ENST00000446877 SLC27A1Q6PCB7 646 aa27.06■■□□□ 1.92
PMS1-214ENST00000446877 OXER1Q8TDS5 423 aa27.06■■□□□ 1.92
PMS1-214ENST00000446877 ASAP3Q8TDY4 903 aa27.06■■□□□ 1.92
PMS1-214ENST00000446877 SHDQ96IW2 340 aa27.06■■□□□ 1.92
PMS1-214ENST00000446877 EIF2AK1Q9BQI3 630 aaKnown RBP27.06■■□□□ 1.92
PMS1-214ENST00000446877 SLC2A4RGQ9NR83 387 aa27.06■■□□□ 1.92
PMS1-214ENST00000446877 ANKEF1Q9NU02 776 aa27.06■■□□□ 1.92
PMS1-214ENST00000446877 NUMBLQ9Y6R0 609 aa27.06■■□□□ 1.92
PMS1-214ENST00000446877 NPTXRO95502 500 aa27.05■■□□□ 1.92
PMS1-214ENST00000446877 ARL2P36404 184 aa27.05■■□□□ 1.92
PMS1-214ENST00000446877 GSTCDQ8NEC7 633 aa27.05■■□□□ 1.92
PMS1-214ENST00000446877 RABGGTAQ92696 567 aa27.05■■□□□ 1.92
PMS1-214ENST00000446877 HINFPQ9BQA5 517 aa27.05■■□□□ 1.92
PMS1-214ENST00000446877 NFKBIZQ9BYH8 718 aa27.05■■□□□ 1.92
PMS1-214ENST00000446877 KLK14Q9P0G3 267 aa27.05■■□□□ 1.92
PMS1-214ENST00000446877 PCDHA12Q9UN75 941 aa27.05■■□□□ 1.92
PMS1-214ENST00000446877 SF3B1O75533 1304 aaKnown RBP eCLIP27.05■■□□□ 1.92
PMS1-214ENST00000446877 C2orf16Q68DN1 1984 aa27.04■■□□□ 1.92
PMS1-214ENST00000446877 HSP90AA2PQ14568 343 aaPredicted RBP27.04■■□□□ 1.92
PMS1-214ENST00000446877 C1orf210Q8IVY1 113 aa27.04■■□□□ 1.92
PMS1-214ENST00000446877 A0A1B0GUA9 196 aa27.03■■□□□ 1.92
PMS1-214ENST00000446877 B4GALT5O43286 388 aa27.03■■□□□ 1.92
PMS1-214ENST00000446877 LYPLA2O95372 231 aa27.03■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms