RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 CASP4P49662 377 aa16.5■□□□□ 0.23
CCNE1-203ENST00000444983 CCL23P55773 120 aa16.5■□□□□ 0.23
CCNE1-203ENST00000444983 MARSP56192 900 aaKnown RBP16.5■□□□□ 0.23
CCNE1-203ENST00000444983 NFX1Q12986 1120 aaKnown RBP16.5■□□□□ 0.23
CCNE1-203ENST00000444983 SLC27A1Q6PCB7 646 aa16.5■□□□□ 0.23
CCNE1-203ENST00000444983 CRELD2Q6UXH1 353 aaPredicted RBP16.5■□□□□ 0.23
CCNE1-203ENST00000444983 XXYLT1Q8NBI6 393 aa16.5■□□□□ 0.23
CCNE1-203ENST00000444983 RNF214Q8ND24 703 aa16.5■□□□□ 0.23
CCNE1-203ENST00000444983 CCDC51Q96ER9 411 aa16.5■□□□□ 0.23
CCNE1-203ENST00000444983 MKNK1Q9BUB5 465 aa16.5■□□□□ 0.23
CCNE1-203ENST00000444983 IFIH1Q9BYX4 1025 aaKnown RBP16.5■□□□□ 0.23
CCNE1-203ENST00000444983 ANKFY1Q9P2R3 1169 aa16.5■□□□□ 0.23
CCNE1-203ENST00000444983 AGO2Q9UKV8 859 aaKnown RBP16.5■□□□□ 0.23
CCNE1-203ENST00000444983 PIN4Q9Y237 131 aaKnown RBP16.5■□□□□ 0.23
CCNE1-203ENST00000444983 BECN2A8MW95 431 aa16.5■□□□□ 0.23
CCNE1-203ENST00000444983 CETN3O15182 167 aa16.5■□□□□ 0.23
CCNE1-203ENST00000444983 MGEA5O60502 916 aa16.5■□□□□ 0.23
CCNE1-203ENST00000444983 NOLC1Q14978 699 aaKnown RBP eCLIP16.5■□□□□ 0.23
CCNE1-203ENST00000444983 ZNF568Q3ZCX4 644 aa16.5■□□□□ 0.23
CCNE1-203ENST00000444983 MFSD5Q6N075 450 aa16.5■□□□□ 0.23
CCNE1-203ENST00000444983 NOC3LQ8WTT2 800 aaKnown RBP16.5■□□□□ 0.23
CCNE1-203ENST00000444983 TCHPQ9BT92 498 aa16.5■□□□□ 0.23
CCNE1-203ENST00000444983 MSTO1Q9BUK6 570 aa16.5■□□□□ 0.23
CCNE1-203ENST00000444983 FSD2A1L4K1 749 aa16.49■□□□□ 0.23
CCNE1-203ENST00000444983 OGTO15294 1046 aa16.49■□□□□ 0.23
CCNE1-203ENST00000444983 SLC16A3O15427 465 aaKnown RBP16.49■□□□□ 0.23
CCNE1-203ENST00000444983 EXTL3O43909 919 aa16.49■□□□□ 0.23
CCNE1-203ENST00000444983 FGFR1OPO95684 399 aaKnown RBP16.49■□□□□ 0.23
CCNE1-203ENST00000444983 LDHAP00338 332 aaKnown RBP16.49■□□□□ 0.23
CCNE1-203ENST00000444983 RFC2P35250 354 aa16.49■□□□□ 0.23
CCNE1-203ENST00000444983 CYP2J2P51589 502 aa16.49■□□□□ 0.23
CCNE1-203ENST00000444983 ZBTB41Q5SVQ8 909 aa16.49■□□□□ 0.23
CCNE1-203ENST00000444983 ZBTB33Q86T24 672 aa16.49■□□□□ 0.23
CCNE1-203ENST00000444983 RTN4RL1Q86UN2 441 aaPredicted RBP16.49■□□□□ 0.23
CCNE1-203ENST00000444983 GPD1LQ8N335 351 aa16.49■□□□□ 0.23
CCNE1-203ENST00000444983 DBF4BQ8NFT6 615 aa16.49■□□□□ 0.23
CCNE1-203ENST00000444983 SAAL1Q96ER3 474 aa16.49■□□□□ 0.23
CCNE1-203ENST00000444983 HTATIP2Q9BUP3 242 aa16.49■□□□□ 0.23
CCNE1-203ENST00000444983 EIF2AQ9BY44 585 aaKnown RBP16.49■□□□□ 0.23
CCNE1-203ENST00000444983 CPSF3Q9UKF6 684 aaKnown RBP16.49■□□□□ 0.23
CCNE1-203ENST00000444983 LTBP2Q14767 1821 aa16.48■□□□□ 0.23
CCNE1-203ENST00000444983 LRRC10BA6NIK2 292 aa16.48■□□□□ 0.23
CCNE1-203ENST00000444983 EXOC3O60645 756 aa16.48■□□□□ 0.23
CCNE1-203ENST00000444983 RAG1P15918 1043 aa16.48■□□□□ 0.23
CCNE1-203ENST00000444983 POU5F1Q01860 360 aaKnown RBP16.48■□□□□ 0.23
CCNE1-203ENST00000444983 SNRNP35Q16560 246 aaKnown RBP16.48■□□□□ 0.23
CCNE1-203ENST00000444983 TCTN1Q2MV58 587 aa16.48■□□□□ 0.23
CCNE1-203ENST00000444983 DCAF4L1Q3SXM0 396 aa16.48■□□□□ 0.23
CCNE1-203ENST00000444983 CEP120Q8N960 986 aa16.48■□□□□ 0.23
CCNE1-203ENST00000444983 ADPGKQ9BRR6 497 aa16.48■□□□□ 0.23
CCNE1-203ENST00000444983 FTHL17Q9BXU8 183 aa16.48■□□□□ 0.23
CCNE1-203ENST00000444983 KIAA1586Q9HCI6 787 aa16.48■□□□□ 0.23
CCNE1-203ENST00000444983 PRDM5Q9NQX1 630 aaPredicted RBP16.48■□□□□ 0.23
CCNE1-203ENST00000444983 ZNF623O75123 536 aa16.47■□□□□ 0.23
CCNE1-203ENST00000444983 GNA14O95837 355 aa16.47■□□□□ 0.23
CCNE1-203ENST00000444983 ATP1A3P13637 1013 aa16.47■□□□□ 0.23
CCNE1-203ENST00000444983 PSMC2P35998 433 aaKnown RBP16.47■□□□□ 0.23
CCNE1-203ENST00000444983 ACOT2P49753 483 aa16.47■□□□□ 0.23
CCNE1-203ENST00000444983 TPD52L1Q16890 204 aaPredicted RBP16.47■□□□□ 0.23
CCNE1-203ENST00000444983 TMEM132AQ24JP5 1023 aa16.47■□□□□ 0.23
CCNE1-203ENST00000444983 APTXQ7Z2E3 356 aaKnown RBP16.47■□□□□ 0.23
CCNE1-203ENST00000444983 FRMD5Q7Z6J6 570 aa16.47■□□□□ 0.23
CCNE1-203ENST00000444983 CBWD2Q8IUF1 395 aa16.47■□□□□ 0.23
CCNE1-203ENST00000444983 SMG8Q8ND04 991 aaKnown RBP16.47■□□□□ 0.23
CCNE1-203ENST00000444983 LINC01599Q8WXQ3 324 aa16.47■□□□□ 0.23
CCNE1-203ENST00000444983 APBB2Q92870 758 aa16.47■□□□□ 0.23
CCNE1-203ENST00000444983 MFSD14AQ96MC6 490 aa16.47■□□□□ 0.23
CCNE1-203ENST00000444983 RGS18Q9NS28 235 aa16.47■□□□□ 0.23
CCNE1-203ENST00000444983 ANK1P16157 1881 aa16.47■□□□□ 0.23
CCNE1-203ENST00000444983 A0A0U1RQF3 1178 aa16.46■□□□□ 0.23
CCNE1-203ENST00000444983 GOLGA8IPA6NC78 632 aa16.46■□□□□ 0.23
CCNE1-203ENST00000444983 GOLGA8JA6NMD2 632 aa16.46■□□□□ 0.23
CCNE1-203ENST00000444983 MEFVO15553 781 aaPredicted RBP16.46■□□□□ 0.23
CCNE1-203ENST00000444983 NPTXRO95502 500 aa16.46■□□□□ 0.23
CCNE1-203ENST00000444983 ADRB2P07550 413 aa16.46■□□□□ 0.23
CCNE1-203ENST00000444983 ZSCAN20P17040 1043 aaPredicted RBP16.46■□□□□ 0.23
CCNE1-203ENST00000444983 EEF1GP26641 437 aaKnown RBP16.46■□□□□ 0.23
CCNE1-203ENST00000444983 TNFSF9P41273 254 aa16.46■□□□□ 0.23
CCNE1-203ENST00000444983 GRM5P41594 1212 aa16.46■□□□□ 0.23
CCNE1-203ENST00000444983 FAM189BP81408 668 aa16.46■□□□□ 0.23
CCNE1-203ENST00000444983 SEZ6Q53EL9 994 aa16.46■□□□□ 0.23
CCNE1-203ENST00000444983 HSP90AA4PQ58FG1 418 aa16.46■□□□□ 0.23
CCNE1-203ENST00000444983 TCP11X2Q5H9J9 407 aa16.46■□□□□ 0.23
CCNE1-203ENST00000444983 CEP135Q66GS9 1140 aa16.46■□□□□ 0.23
CCNE1-203ENST00000444983 TWF2Q6IBS0 349 aaKnown RBP16.46■□□□□ 0.23
CCNE1-203ENST00000444983 TMEM192Q8IY95 271 aa16.46■□□□□ 0.23
CCNE1-203ENST00000444983 ADAM2Q99965 735 aa16.46■□□□□ 0.23
CCNE1-203ENST00000444983 FAM213AQ9BRX8 229 aa16.46■□□□□ 0.23
CCNE1-203ENST00000444983 TSPYL2Q9H2G4 693 aaPredicted RBP16.46■□□□□ 0.23
CCNE1-203ENST00000444983 FAM105AQ9NUU6 356 aa16.46■□□□□ 0.23
CCNE1-203ENST00000444983 FRMD4BQ9Y2L6 1034 aa16.46■□□□□ 0.23
CCNE1-203ENST00000444983 KCNJ18B7U540 433 aa16.46■□□□□ 0.23
CCNE1-203ENST00000444983 GOLGA6L19H0YKK7 550 aa16.46■□□□□ 0.23
CCNE1-203ENST00000444983 CSF2RAP15509 400 aa16.46■□□□□ 0.23
CCNE1-203ENST00000444983 MATR3P43243 847 aaKnown RBP eCLIP16.46■□□□□ 0.23
CCNE1-203ENST00000444983 KCNJ12Q14500 433 aa16.46■□□□□ 0.23
CCNE1-203ENST00000444983 KYAT1Q16773 422 aa16.46■□□□□ 0.23
CCNE1-203ENST00000444983 APBB1IPQ7Z5R6 666 aaPredicted RBP16.46■□□□□ 0.23
CCNE1-203ENST00000444983 MRPL10Q7Z7H8 261 aaKnown RBP16.46■□□□□ 0.23
CCNE1-203ENST00000444983 FAM114A1Q8IWE2 563 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms