RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 TNMDQ9H2S6 317 aa4.32□□□□□ -1.72
UBR3-206ENST00000444475 EHD1Q9H4M9 534 aa4.32□□□□□ -1.72
UBR3-206ENST00000444475 HOMER3Q9NSC5 361 aa4.32□□□□□ -1.72
UBR3-206ENST00000444475 WHRNQ9P202 907 aa4.32□□□□□ -1.72
UBR3-206ENST00000444475 MAPKBP1O60336 1514 aa4.31□□□□□ -1.72
UBR3-206ENST00000444475 PRDM2Q13029 1718 aa4.31□□□□□ -1.72
UBR3-206ENST00000444475 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.31□□□□□ -1.72
UBR3-206ENST00000444475 TRIM43BA6NCK2 446 aa4.31□□□□□ -1.72
UBR3-206ENST00000444475 GOLGA6L3A6NEY3 463 aa4.31□□□□□ -1.72
UBR3-206ENST00000444475 UBAP1LF5GYI3 381 aa4.31□□□□□ -1.72
UBR3-206ENST00000444475 VWA5AO00534 786 aa4.31□□□□□ -1.72
UBR3-206ENST00000444475 MTSS1O43312 755 aa4.31□□□□□ -1.72
UBR3-206ENST00000444475 TGM5O43548 720 aa4.31□□□□□ -1.72
UBR3-206ENST00000444475 SNRPA1P09661 255 aaKnown RBP4.31□□□□□ -1.72
UBR3-206ENST00000444475 MAPK3P27361 379 aaPredicted RBP4.31□□□□□ -1.72
UBR3-206ENST00000444475 TNFRSF8P28908 595 aa4.31□□□□□ -1.72
UBR3-206ENST00000444475 CIITAP33076 1130 aa4.31□□□□□ -1.72
UBR3-206ENST00000444475 GNL1P36915 607 aaPredicted RBP4.31□□□□□ -1.72
UBR3-206ENST00000444475 USP11P51784 963 aa4.31□□□□□ -1.72
UBR3-206ENST00000444475 ZNF41P51814 821 aaPredicted RBP4.31□□□□□ -1.72
UBR3-206ENST00000444475 PRPF4BQ13523 1007 aaKnown RBP4.31□□□□□ -1.72
UBR3-206ENST00000444475 POLD3Q15054 466 aaPredicted RBP4.31□□□□□ -1.72
UBR3-206ENST00000444475 ANO6Q4KMQ2 910 aa4.31□□□□□ -1.72
UBR3-206ENST00000444475 BOLA3Q53S33 107 aa4.31□□□□□ -1.72
UBR3-206ENST00000444475 C1orf141Q5JVX7 400 aa4.31□□□□□ -1.72
UBR3-206ENST00000444475 AP1ARQ63HQ0 302 aa4.31□□□□□ -1.72
UBR3-206ENST00000444475 KLHDC10Q6PID8 442 aa4.31□□□□□ -1.72
UBR3-206ENST00000444475 ZNF438Q7Z4V0 828 aa4.31□□□□□ -1.72
UBR3-206ENST00000444475 NCAPG2Q86XI2 1143 aa4.31□□□□□ -1.72
UBR3-206ENST00000444475 SYTL1Q8IYJ3 562 aa4.31□□□□□ -1.72
UBR3-206ENST00000444475 TRIM43Q96BQ3 446 aaPredicted RBP4.31□□□□□ -1.72
UBR3-206ENST00000444475 C18orf8Q96DM3 657 aa4.31□□□□□ -1.72
UBR3-206ENST00000444475 EMILIN2Q9BXX0 1053 aa4.31□□□□□ -1.72
UBR3-206ENST00000444475 IL20Q9NYY1 176 aa4.31□□□□□ -1.72
UBR3-206ENST00000444475 HPS5Q9UPZ3 1129 aa4.31□□□□□ -1.72
UBR3-206ENST00000444475 INVSQ9Y283 1065 aa4.31□□□□□ -1.72
UBR3-206ENST00000444475 ASB3Q9Y575 518 aa4.31□□□□□ -1.72
UBR3-206ENST00000444475 MRFAP1Q9Y605 127 aa4.31□□□□□ -1.72
UBR3-206ENST00000444475 V9GYY5 206 aaPredicted RBP4.31□□□□□ -1.72
UBR3-206ENST00000444475 A0A1W2PPC4 97 aa4.31□□□□□ -1.72
UBR3-206ENST00000444475 hCG_1807616A0A1W2PRN6 198 aa4.31□□□□□ -1.72
UBR3-206ENST00000444475 A8MXE2 369 aa4.31□□□□□ -1.72
UBR3-206ENST00000444475 HNRNPCL2B2RXH8 293 aa4.31□□□□□ -1.72
UBR3-206ENST00000444475 NT5C1B-RDH14C9J2C7 533 aa4.31□□□□□ -1.72
UBR3-206ENST00000444475 SYNCRIPO60506 623 aaKnown RBP4.31□□□□□ -1.72
UBR3-206ENST00000444475 HNRNPCL1O60812 293 aaKnown RBP4.31□□□□□ -1.72
UBR3-206ENST00000444475 ATP5BP06576 529 aaKnown RBP4.31□□□□□ -1.72
UBR3-206ENST00000444475 HSPA1AP0DMV8 641 aaKnown RBP4.31□□□□□ -1.72
UBR3-206ENST00000444475 HSPA1BP0DMV9 641 aaKnown RBP4.31□□□□□ -1.72
UBR3-206ENST00000444475 SELPP16109 830 aa4.31□□□□□ -1.72
UBR3-206ENST00000444475 KELP23276 732 aa4.31□□□□□ -1.72
UBR3-206ENST00000444475 GRNP28799 593 aaKnown RBP4.31□□□□□ -1.72
UBR3-206ENST00000444475 NR2C2P49116 596 aa4.31□□□□□ -1.72
UBR3-206ENST00000444475 C19orf57Q0VDD7 668 aa4.31□□□□□ -1.72
UBR3-206ENST00000444475 ZBTB17Q13105 803 aa4.31□□□□□ -1.72
UBR3-206ENST00000444475 PTK2BQ14289 1009 aa4.31□□□□□ -1.72
UBR3-206ENST00000444475 ARID5BQ14865 1188 aa4.31□□□□□ -1.72
UBR3-206ENST00000444475 GEN1Q17RS7 908 aa4.31□□□□□ -1.72
UBR3-206ENST00000444475 CTXN3Q4LDR2 81 aa4.31□□□□□ -1.72
UBR3-206ENST00000444475 ODF2Q5BJF6 829 aa4.31□□□□□ -1.72
UBR3-206ENST00000444475 DZIP1Q86YF9 867 aaKnown RBP4.31□□□□□ -1.72
UBR3-206ENST00000444475 SLC4A11Q8NBS3 891 aa4.31□□□□□ -1.72
UBR3-206ENST00000444475 AUTS2Q8WXX7 1259 aa4.31□□□□□ -1.72
UBR3-206ENST00000444475 CTNNBL1Q8WYA6 563 aaPredicted RBP4.31□□□□□ -1.72
UBR3-206ENST00000444475 KRT35Q92764 455 aa4.31□□□□□ -1.72
UBR3-206ENST00000444475 MVB12AQ96EY5 273 aa4.31□□□□□ -1.72
UBR3-206ENST00000444475 PCDHGB4Q9UN71 923 aa4.31□□□□□ -1.72
UBR3-206ENST00000444475 DDX49Q9Y6V7 483 aaKnown RBP4.31□□□□□ -1.72
UBR3-206ENST00000444475 EIF4G3O43432 1585 aaKnown RBP4.31□□□□□ -1.72
UBR3-206ENST00000444475 ARPC4-TTLL3A0A0A6YYG9 625 aa4.31□□□□□ -1.72
UBR3-206ENST00000444475 TNFRSF10CO14798 259 aa4.31□□□□□ -1.72
UBR3-206ENST00000444475 RNGTTO60942 597 aaKnown RBP4.31□□□□□ -1.72
UBR3-206ENST00000444475 SIN3BO75182 1162 aa4.31□□□□□ -1.72
UBR3-206ENST00000444475 C5AR1P21730 350 aa4.31□□□□□ -1.72
UBR3-206ENST00000444475 TM4SF1P30408 202 aa4.31□□□□□ -1.72
UBR3-206ENST00000444475 ACAA2P42765 397 aaKnown RBP4.31□□□□□ -1.72
UBR3-206ENST00000444475 NEUROD1Q13562 356 aa4.31□□□□□ -1.72
UBR3-206ENST00000444475 C15orf59Q2T9L4 293 aaPredicted RBP4.31□□□□□ -1.72
UBR3-206ENST00000444475 GNPTABQ3T906 1256 aa4.31□□□□□ -1.72
UBR3-206ENST00000444475 CYP4A22Q5TCH4 519 aa4.31□□□□□ -1.72
UBR3-206ENST00000444475 USP45Q70EL2 814 aa4.31□□□□□ -1.72
UBR3-206ENST00000444475 WNK4Q96J92 1243 aa4.31□□□□□ -1.72
UBR3-206ENST00000444475 CNPPD1Q9BV87 410 aa4.31□□□□□ -1.72
UBR3-206ENST00000444475 DNAI2Q9GZS0 605 aa4.31□□□□□ -1.72
UBR3-206ENST00000444475 PAIP1Q9H074 479 aaKnown RBP4.31□□□□□ -1.72
UBR3-206ENST00000444475 C1orf21Q9H246 121 aa4.31□□□□□ -1.72
UBR3-206ENST00000444475 ELP3Q9H9T3 547 aa4.31□□□□□ -1.72
UBR3-206ENST00000444475 ADD3Q9UEY8 706 aaKnown RBP4.31□□□□□ -1.72
UBR3-206ENST00000444475 PRODHO43272 600 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 FSBPO95073 299 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 CSPG5O95196 566 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 ASGR1P07306 291 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 ALOX15P16050 662 aaPredicted RBP4.3□□□□□ -1.72
UBR3-206ENST00000444475 JAK1P23458 1154 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 IDUAP35475 653 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 MMP16P51512 607 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 IL2P60568 153 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 PRKCZQ05513 592 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 ZBTB16Q05516 673 aa4.3□□□□□ -1.72
UBR3-206ENST00000444475 RUNX1T1Q06455 604 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms