RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 TMEM74BQ9NUR3 256 aa8.38□□□□□ -1.07
SSXP3-201ENST00000442971 DNAAF2Q9NVR5 837 aaKnown RBP8.38□□□□□ -1.07
SSXP3-201ENST00000442971 ANKHD1Q8IWZ3 2542 aaKnown RBP8.38□□□□□ -1.07
SSXP3-201ENST00000442971 NOTCH4Q99466 2003 aa8.37□□□□□ -1.07
SSXP3-201ENST00000442971 GPR182O15218 404 aa8.37□□□□□ -1.07
SSXP3-201ENST00000442971 TGM5O43548 720 aa8.37□□□□□ -1.07
SSXP3-201ENST00000442971 ZNF862O60290 1169 aa8.37□□□□□ -1.07
SSXP3-201ENST00000442971 DKK1O94907 266 aa8.37□□□□□ -1.07
SSXP3-201ENST00000442971 C1RP00736 705 aa8.37□□□□□ -1.07
SSXP3-201ENST00000442971 CFIP05156 583 aa8.37□□□□□ -1.07
SSXP3-201ENST00000442971 URODP06132 367 aa8.37□□□□□ -1.07
SSXP3-201ENST00000442971 NR3C2P08235 984 aa8.37□□□□□ -1.07
SSXP3-201ENST00000442971 TGFB3P10600 412 aa8.37□□□□□ -1.07
SSXP3-201ENST00000442971 EIF2AK2P19525 551 aaKnown RBP8.37□□□□□ -1.07
SSXP3-201ENST00000442971 UCNP55089 124 aa8.37□□□□□ -1.07
SSXP3-201ENST00000442971 GFPT1Q06210 699 aaPredicted RBP8.37□□□□□ -1.07
SSXP3-201ENST00000442971 ARHGEF16Q5VV41 709 aa8.37□□□□□ -1.07
SSXP3-201ENST00000442971 SYT12Q8IV01 421 aa8.37□□□□□ -1.07
SSXP3-201ENST00000442971 PLPP6Q8IY26 295 aa8.37□□□□□ -1.07
SSXP3-201ENST00000442971 RNF169Q8NCN4 708 aa8.37□□□□□ -1.07
SSXP3-201ENST00000442971 RGS22Q8NE09 1264 aa8.37□□□□□ -1.07
SSXP3-201ENST00000442971 FGF11Q92914 225 aa8.37□□□□□ -1.07
SSXP3-201ENST00000442971 MCRS1Q96EZ8 462 aa8.37□□□□□ -1.07
SSXP3-201ENST00000442971 HHIPQ96QV1 700 aa8.37□□□□□ -1.07
SSXP3-201ENST00000442971 DBNDD2Q9BQY9 259 aa8.37□□□□□ -1.07
SSXP3-201ENST00000442971 TOR4AQ9NXH8 423 aa8.37□□□□□ -1.07
SSXP3-201ENST00000442971 COL20A1Q9P218 1284 aa8.37□□□□□ -1.07
SSXP3-201ENST00000442971 SSX2IPQ9Y2D8 614 aa8.37□□□□□ -1.07
SSXP3-201ENST00000442971 AK5Q9Y6K8 562 aa8.37□□□□□ -1.07
SSXP3-201ENST00000442971 TNRC6BQ9UPQ9 1833 aaKnown RBP8.36□□□□□ -1.07
SSXP3-201ENST00000442971 CBFA2T3O75081 653 aa8.36□□□□□ -1.07
SSXP3-201ENST00000442971 ATP9AO75110 1047 aa8.36□□□□□ -1.07
SSXP3-201ENST00000442971 ATG13O75143 517 aa8.36□□□□□ -1.07
SSXP3-201ENST00000442971 DSC3Q14574 896 aa8.36□□□□□ -1.07
SSXP3-201ENST00000442971 NBR1Q14596 966 aa8.36□□□□□ -1.07
SSXP3-201ENST00000442971 BROXQ5VW32 411 aa8.36□□□□□ -1.07
SSXP3-201ENST00000442971 ZNF787Q6DD87 383 aa8.36□□□□□ -1.07
SSXP3-201ENST00000442971 TXNDC11Q6PKC3 985 aa8.36□□□□□ -1.07
SSXP3-201ENST00000442971 ECHDC2Q86YB7 292 aa8.36□□□□□ -1.07
SSXP3-201ENST00000442971 SYTL5Q8TDW5 730 aaPredicted RBP8.36□□□□□ -1.07
SSXP3-201ENST00000442971 TBC1D5Q92609 795 aa8.36□□□□□ -1.07
SSXP3-201ENST00000442971 TMEM176AQ96HP8 235 aa8.36□□□□□ -1.07
SSXP3-201ENST00000442971 APOL6Q9BWW8 343 aa8.36□□□□□ -1.07
SSXP3-201ENST00000442971 ANTXR1Q9H6X2 564 aa8.36□□□□□ -1.07
SSXP3-201ENST00000442971 ARMT1Q9H993 441 aa8.36□□□□□ -1.07
SSXP3-201ENST00000442971 GDE1Q9NZC3 331 aa8.36□□□□□ -1.07
SSXP3-201ENST00000442971 PNMA2Q9UL42 364 aa8.36□□□□□ -1.07
SSXP3-201ENST00000442971 KCNH3Q9ULD8 1083 aa8.36□□□□□ -1.07
SSXP3-201ENST00000442971 SLC6A14Q9UN76 642 aa8.36□□□□□ -1.07
SSXP3-201ENST00000442971 GINS2Q9Y248 185 aa8.36□□□□□ -1.07
SSXP3-201ENST00000442971 ITGB2P05107 769 aa8.35□□□□□ -1.07
SSXP3-201ENST00000442971 ATXN1LP0C7T5 689 aaKnown RBP8.35□□□□□ -1.07
SSXP3-201ENST00000442971 UBTFL1P0CB47 393 aaPredicted RBP8.35□□□□□ -1.07
SSXP3-201ENST00000442971 BCKDHBP21953 392 aa8.35□□□□□ -1.07
SSXP3-201ENST00000442971 FCARP24071 287 aa8.35□□□□□ -1.07
SSXP3-201ENST00000442971 SLC16A2P36021 539 aa8.35□□□□□ -1.07
SSXP3-201ENST00000442971 SOX9P48436 509 aa8.35□□□□□ -1.07
SSXP3-201ENST00000442971 IGBP1P78318 339 aa8.35□□□□□ -1.07
SSXP3-201ENST00000442971 MMRN1Q13201 1228 aa8.35□□□□□ -1.07
SSXP3-201ENST00000442971 DSG2Q14126 1118 aa8.35□□□□□ -1.07
SSXP3-201ENST00000442971 SMAD1Q15797 465 aaKnown RBP8.35□□□□□ -1.07
SSXP3-201ENST00000442971 USP39Q53GS9 565 aaKnown RBP8.35□□□□□ -1.07
SSXP3-201ENST00000442971 CTR9Q6PD62 1173 aa8.35□□□□□ -1.07
SSXP3-201ENST00000442971 LILRA6Q6PI73 481 aa8.35□□□□□ -1.07
SSXP3-201ENST00000442971 MMP21Q8N119 569 aa8.35□□□□□ -1.07
SSXP3-201ENST00000442971 STK11IPQ8N1F8 1099 aa8.35□□□□□ -1.07
SSXP3-201ENST00000442971 TMEM40Q8WWA1 233 aa8.35□□□□□ -1.07
SSXP3-201ENST00000442971 C8orf33Q9H7E9 229 aaPredicted RBP8.35□□□□□ -1.07
SSXP3-201ENST00000442971 NRDE2Q9H7Z3 1164 aa8.35□□□□□ -1.07
SSXP3-201ENST00000442971 RXFP1Q9HBX9 757 aa8.35□□□□□ -1.07
SSXP3-201ENST00000442971 ZFP14Q9HCL3 533 aa8.35□□□□□ -1.07
SSXP3-201ENST00000442971 CHST12Q9NRB3 414 aa8.35□□□□□ -1.07
SSXP3-201ENST00000442971 STARD5Q9NSY2 213 aa8.35□□□□□ -1.07
SSXP3-201ENST00000442971 POLR3BQ9NW08 1133 aaPredicted RBP8.35□□□□□ -1.07
SSXP3-201ENST00000442971 EBF1Q9UH73 591 aa8.35□□□□□ -1.07
SSXP3-201ENST00000442971 PCOLCE2Q9UKZ9 415 aa8.35□□□□□ -1.07
SSXP3-201ENST00000442971 POLIQ9UNA4 740 aa8.35□□□□□ -1.07
SSXP3-201ENST00000442971 BSNQ9UPA5 3926 aa8.35□□□□□ -1.07
SSXP3-201ENST00000442971 VWA8A3KMH1 1905 aa8.35□□□□□ -1.07
SSXP3-201ENST00000442971 PCDH15Q96QU1 1955 aa8.35□□□□□ -1.07
SSXP3-201ENST00000442971 SLC38A8A6NNN8 435 aa8.34□□□□□ -1.07
SSXP3-201ENST00000442971 B4E1Z4 1266 aa8.34□□□□□ -1.07
SSXP3-201ENST00000442971 TNFRSF10BO14763 440 aa8.34□□□□□ -1.07
SSXP3-201ENST00000442971 ZNF263O14978 683 aa8.34□□□□□ -1.07
SSXP3-201ENST00000442971 DIAPH2O60879 1101 aa8.34□□□□□ -1.07
SSXP3-201ENST00000442971 SOD2P04179 222 aa8.34□□□□□ -1.07
SSXP3-201ENST00000442971 C8BP07358 591 aa8.34□□□□□ -1.07
SSXP3-201ENST00000442971 HNRNPA1P09651 372 aaKnown RBP eCLIP8.34□□□□□ -1.07
SSXP3-201ENST00000442971 NUDT7P0C024 238 aa8.34□□□□□ -1.07
SSXP3-201ENST00000442971 PSMC3P17980 439 aa8.34□□□□□ -1.07
SSXP3-201ENST00000442971 SLC11A1P49279 550 aa8.34□□□□□ -1.07
SSXP3-201ENST00000442971 KPNA1P52294 538 aaPredicted RBP8.34□□□□□ -1.07
SSXP3-201ENST00000442971 PON2Q15165 354 aa8.34□□□□□ -1.07
SSXP3-201ENST00000442971 C6orf118Q5T5N4 469 aa8.34□□□□□ -1.07
SSXP3-201ENST00000442971 SLC9C2Q5TAH2 1124 aa8.34□□□□□ -1.07
SSXP3-201ENST00000442971 NME8Q8N427 588 aa8.34□□□□□ -1.07
SSXP3-201ENST00000442971 EXD3Q8N9H8 876 aa8.34□□□□□ -1.07
SSXP3-201ENST00000442971 FAM200AQ8TCP9 573 aa8.34□□□□□ -1.07
SSXP3-201ENST00000442971 CSGALNACT1Q8TDX6 532 aa8.34□□□□□ -1.07
SSXP3-201ENST00000442971 SNRNP27Q8WVK2 155 aaKnown RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms