RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 EDC4Q6P2E9 1401 aaKnown RBP10.92□□□□□ -0.66
LIN54-202ENST00000442461 C1orf232A0A0U1RR37 186 aa10.92□□□□□ -0.66
LIN54-202ENST00000442461 KPNA7A9QM74 516 aa10.92□□□□□ -0.66
LIN54-202ENST00000442461 DDHD2O94830 711 aa10.92□□□□□ -0.66
LIN54-202ENST00000442461 TNNC2P02585 160 aa10.92□□□□□ -0.66
LIN54-202ENST00000442461 CDH3P22223 829 aa10.92□□□□□ -0.66
LIN54-202ENST00000442461 COPAP53621 1224 aa10.92□□□□□ -0.66
LIN54-202ENST00000442461 CDK17Q00537 523 aa10.92□□□□□ -0.66
LIN54-202ENST00000442461 OVGP1Q12889 678 aa10.92□□□□□ -0.66
LIN54-202ENST00000442461 STK4Q13043 487 aa10.92□□□□□ -0.66
LIN54-202ENST00000442461 MRPL28Q13084 256 aaKnown RBP10.92□□□□□ -0.66
LIN54-202ENST00000442461 MAPK7Q13164 816 aa10.92□□□□□ -0.66
LIN54-202ENST00000442461 PICALMQ13492 652 aa10.92□□□□□ -0.66
LIN54-202ENST00000442461 TRIM60Q495X7 471 aa10.92□□□□□ -0.66
LIN54-202ENST00000442461 EFHC1Q5JVL4 640 aa10.92□□□□□ -0.66
LIN54-202ENST00000442461 PI16Q6UXB8 463 aa10.92□□□□□ -0.66
LIN54-202ENST00000442461 ZC3H15Q8WU90 426 aaKnown RBP10.92□□□□□ -0.66
LIN54-202ENST00000442461 GLG1Q92896 1179 aa10.92□□□□□ -0.66
LIN54-202ENST00000442461 TBC1D10AQ9BXI6 508 aa10.92□□□□□ -0.66
LIN54-202ENST00000442461 MRGBPQ9NV56 204 aa10.92□□□□□ -0.66
LIN54-202ENST00000442461 MARCOQ9UEW3 520 aaPredicted RBP10.92□□□□□ -0.66
LIN54-202ENST00000442461 ANAPC7Q9UJX3 599 aa10.92□□□□□ -0.66
LIN54-202ENST00000442461 APPL1Q9UKG1 709 aa10.92□□□□□ -0.66
LIN54-202ENST00000442461 WDR64B1ANS9 1081 aa10.91□□□□□ -0.66
LIN54-202ENST00000442461 USP17L12C9JPN9 530 aa10.91□□□□□ -0.66
LIN54-202ENST00000442461 USP17L21D6R901 530 aa10.91□□□□□ -0.66
LIN54-202ENST00000442461 ENTPD5O75356 428 aa10.91□□□□□ -0.66
LIN54-202ENST00000442461 MFN2O95140 757 aa10.91□□□□□ -0.66
LIN54-202ENST00000442461 ITGA6P23229 1130 aa10.91□□□□□ -0.66
LIN54-202ENST00000442461 SKIV2L2P42285 1042 aaKnown RBP10.91□□□□□ -0.66
LIN54-202ENST00000442461 GPS1Q13098 491 aa10.91□□□□□ -0.66
LIN54-202ENST00000442461 RGS21Q2M5E4 152 aa10.91□□□□□ -0.66
LIN54-202ENST00000442461 THOC7Q6I9Y2 204 aaKnown RBP10.91□□□□□ -0.66
LIN54-202ENST00000442461 RSPH3Q86UC2 560 aa10.91□□□□□ -0.66
LIN54-202ENST00000442461 RFX6Q8HWS3 928 aa10.91□□□□□ -0.66
LIN54-202ENST00000442461 GLYCTKQ8IVS8 523 aa10.91□□□□□ -0.66
LIN54-202ENST00000442461 ST13P5Q8NFI4 369 aaPredicted RBP10.91□□□□□ -0.66
LIN54-202ENST00000442461 CCDC127Q96BQ5 260 aa10.91□□□□□ -0.66
LIN54-202ENST00000442461 FAM89AQ96GI7 184 aa10.91□□□□□ -0.66
LIN54-202ENST00000442461 FAXDC2Q96IV6 333 aa10.91□□□□□ -0.66
LIN54-202ENST00000442461 CYLDQ9NQC7 956 aa10.91□□□□□ -0.66
LIN54-202ENST00000442461 CNOT7Q9UIV1 285 aaKnown RBP10.91□□□□□ -0.66
LIN54-202ENST00000442461 ARHGEF37A1IGU5 675 aa10.91□□□□□ -0.66
LIN54-202ENST00000442461 EME2A4GXA9 379 aaPredicted RBP10.91□□□□□ -0.66
LIN54-202ENST00000442461 SFI1A8K8P3 1242 aa10.91□□□□□ -0.66
LIN54-202ENST00000442461 GOLGA8TH3BQL2 631 aa10.91□□□□□ -0.66
LIN54-202ENST00000442461 CLIC2O15247 247 aa10.91□□□□□ -0.66
LIN54-202ENST00000442461 ADCY6O43306 1168 aa10.91□□□□□ -0.66
LIN54-202ENST00000442461 DLATP10515 647 aaKnown RBP10.91□□□□□ -0.66
LIN54-202ENST00000442461 PCP11498 1178 aaKnown RBP10.91□□□□□ -0.66
LIN54-202ENST00000442461 TNNI1P19237 187 aa10.91□□□□□ -0.66
LIN54-202ENST00000442461 PAX3P23760 479 aa10.91□□□□□ -0.66
LIN54-202ENST00000442461 TNFRSF8P28908 595 aa10.91□□□□□ -0.66
LIN54-202ENST00000442461 STX3Q13277 289 aa10.91□□□□□ -0.66
LIN54-202ENST00000442461 SLC5A9Q2M3M2 681 aa10.91□□□□□ -0.66
LIN54-202ENST00000442461 RSBN1Q5VWQ0 802 aaPredicted RBP10.91□□□□□ -0.66
LIN54-202ENST00000442461 C16orf89Q6UX73 402 aa10.91□□□□□ -0.66
LIN54-202ENST00000442461 CYFIP1Q7L576 1253 aa10.91□□□□□ -0.66
LIN54-202ENST00000442461 TMC3Q7Z5M5 1100 aa10.91□□□□□ -0.66
LIN54-202ENST00000442461 GIPC2Q8TF65 315 aa10.91□□□□□ -0.66
LIN54-202ENST00000442461 DEPDC1BQ8WUY9 529 aa10.91□□□□□ -0.66
LIN54-202ENST00000442461 MTA3Q9BTC8 594 aa10.91□□□□□ -0.66
LIN54-202ENST00000442461 LGR6Q9HBX8 967 aa10.91□□□□□ -0.66
LIN54-202ENST00000442461 PHF8Q9UPP1 1060 aa10.91□□□□□ -0.66
LIN54-202ENST00000442461 HPSEQ9Y251 543 aa10.91□□□□□ -0.66
LIN54-202ENST00000442461 HNRNPCL2B2RXH8 293 aa10.91□□□□□ -0.66
LIN54-202ENST00000442461 PPP1R3GB7ZBB8 358 aa10.91□□□□□ -0.66
LIN54-202ENST00000442461 CBX6O95503 412 aa10.91□□□□□ -0.66
LIN54-202ENST00000442461 SERPINB2P05120 415 aa10.91□□□□□ -0.66
LIN54-202ENST00000442461 SRGAP2CP0DJJ0 459 aa10.91□□□□□ -0.66
LIN54-202ENST00000442461 SRGAP2BP0DMP2 458 aa10.91□□□□□ -0.66
LIN54-202ENST00000442461 CIITAP33076 1130 aa10.91□□□□□ -0.66
LIN54-202ENST00000442461 DYNLT1P63172 113 aa10.91□□□□□ -0.66
LIN54-202ENST00000442461 SPOPLQ6IQ16 392 aa10.91□□□□□ -0.66
LIN54-202ENST00000442461 PPP1R2P3Q6NXS1 205 aa10.91□□□□□ -0.66
LIN54-202ENST00000442461 ZNF790Q6PG37 636 aa10.91□□□□□ -0.66
LIN54-202ENST00000442461 MIGA2Q7L4E1 593 aa10.91□□□□□ -0.66
LIN54-202ENST00000442461 PODNQ7Z5L7 613 aa10.91□□□□□ -0.66
LIN54-202ENST00000442461 IQCKQ8N0W5 287 aa10.91□□□□□ -0.66
LIN54-202ENST00000442461 IL17REQ8NFR9 667 aa10.91□□□□□ -0.66
LIN54-202ENST00000442461 ZNF507Q8TCN5 953 aa10.91□□□□□ -0.66
LIN54-202ENST00000442461 OXER1Q8TDS5 423 aa10.91□□□□□ -0.66
LIN54-202ENST00000442461 KCNB2Q92953 911 aa10.91□□□□□ -0.66
LIN54-202ENST00000442461 PAWRQ96IZ0 340 aaKnown RBP10.91□□□□□ -0.66
LIN54-202ENST00000442461 VPS50Q96JG6 964 aa10.91□□□□□ -0.66
LIN54-202ENST00000442461 GRIP2Q9C0E4 1043 aa10.91□□□□□ -0.66
LIN54-202ENST00000442461 TIMMDC1Q9NPL8 285 aa10.91□□□□□ -0.66
LIN54-202ENST00000442461 LOC100653049A0A140TA62 436 aa10.9□□□□□ -0.66
LIN54-202ENST00000442461 GOLGA8SH3BPF8 625 aa10.9□□□□□ -0.66
LIN54-202ENST00000442461 GOLGA8MH3BSY2 632 aa10.9□□□□□ -0.66
LIN54-202ENST00000442461 AKAP10O43572 662 aa10.9□□□□□ -0.66
LIN54-202ENST00000442461 KRT34O76011 436 aa10.9□□□□□ -0.66
LIN54-202ENST00000442461 PGM3O95394 542 aa10.9□□□□□ -0.66
LIN54-202ENST00000442461 BCL10O95999 233 aa10.9□□□□□ -0.66
LIN54-202ENST00000442461 ENO3P13929 434 aaPredicted RBP10.9□□□□□ -0.66
LIN54-202ENST00000442461 ZNF268Q14587 947 aaPredicted RBP10.9□□□□□ -0.66
LIN54-202ENST00000442461 EFTUD2Q15029 972 aaKnown RBP eCLIP10.9□□□□□ -0.66
LIN54-202ENST00000442461 USPL1Q5W0Q7 1092 aa10.9□□□□□ -0.66
LIN54-202ENST00000442461 NSMFQ6X4W1 530 aa10.9□□□□□ -0.66
LIN54-202ENST00000442461 USP49Q70CQ1 688 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms