RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 PHF6Q8IWS0 365 aaKnown RBP eCLIP2.97□□□□□ -1.93
LIG4-203ENST00000442234 KIAA2013Q8IYS2 634 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 CACTIN-AS1Q8N1I8 211 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 RIBC1Q8N443 379 aaPredicted RBP2.97□□□□□ -1.93
LIG4-203ENST00000442234 MIGA1Q8NAN2 632 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 BBOF1Q8ND07 529 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 PDZD8Q8NEN9 1154 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 CALML6Q8TD86 181 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 NELFBQ8WX92 580 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 RUFY2Q8WXA3 655 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 PTPRN2Q92932 1015 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 KCNN1Q92952 543 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 PGBD1Q96JS3 809 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 DNAJC1Q96KC8 554 aaKnown RBP2.97□□□□□ -1.93
LIG4-203ENST00000442234 PCMTD1Q96MG8 357 aaPredicted RBP2.97□□□□□ -1.93
LIG4-203ENST00000442234 TUBGCP5Q96RT8 1024 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 FNBP1Q96RU3 617 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 MMS19Q96T76 1030 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 PSMB7Q99436 277 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 HNRNPABQ99729 332 aaKnown RBP2.97□□□□□ -1.93
LIG4-203ENST00000442234 RAB17Q9H0T7 212 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 BHMT2Q9H2M3 363 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 MRPL46Q9H2W6 279 aaKnown RBP2.97□□□□□ -1.93
LIG4-203ENST00000442234 NDST4Q9H3R1 872 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 DCTPP1Q9H773 170 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 SH2D4AQ9H788 454 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 FAM86C1Q9NVL1 165 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 GID8Q9NWU2 228 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 DDX25Q9UHL0 483 aaKnown RBP2.97□□□□□ -1.93
LIG4-203ENST00000442234 DACH1Q9UI36 760 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 NOVA2Q9UNW9 492 aaKnown RBP2.97□□□□□ -1.93
LIG4-203ENST00000442234 COMMD10Q9Y6G5 202 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 SCINQ9Y6U3 715 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 POLQO75417 2590 aa2.97□□□□□ -1.93
LIG4-203ENST00000442234 HIP1O00291 1037 aa2.96□□□□□ -1.93
LIG4-203ENST00000442234 WNT10BO00744 389 aa2.96□□□□□ -1.93
LIG4-203ENST00000442234 MAGEB3O15480 346 aa2.96□□□□□ -1.93
LIG4-203ENST00000442234 CBFA2T3O75081 653 aa2.96□□□□□ -1.93
LIG4-203ENST00000442234 SEC24DO94855 1032 aaPredicted RBP2.96□□□□□ -1.93
LIG4-203ENST00000442234 UBOX5O94941 541 aa2.96□□□□□ -1.93
LIG4-203ENST00000442234 ABL1P00519 1130 aa2.96□□□□□ -1.93
LIG4-203ENST00000442234 CAPN1P07384 714 aa2.96□□□□□ -1.93
LIG4-203ENST00000442234 VAV1P15498 845 aa2.96□□□□□ -1.93
LIG4-203ENST00000442234 POLR2EP19388 210 aaKnown RBP2.96□□□□□ -1.93
LIG4-203ENST00000442234 CALB2P22676 271 aa2.96□□□□□ -1.93
LIG4-203ENST00000442234 ITGA6P23229 1130 aa2.96□□□□□ -1.93
LIG4-203ENST00000442234 PSMA5P28066 241 aa2.96□□□□□ -1.93
LIG4-203ENST00000442234 HOXD10P28358 340 aa2.96□□□□□ -1.93
LIG4-203ENST00000442234 VHLP40337 213 aa2.96□□□□□ -1.93
LIG4-203ENST00000442234 CCT8P50990 548 aa2.96□□□□□ -1.93
LIG4-203ENST00000442234 BLVRAP53004 296 aa2.96□□□□□ -1.93
LIG4-203ENST00000442234 PPP2R2AP63151 447 aa2.96□□□□□ -1.93
LIG4-203ENST00000442234 TFF2Q03403 129 aa2.96□□□□□ -1.93
LIG4-203ENST00000442234 MSLNQ13421 630 aaPredicted RBP2.96□□□□□ -1.93
LIG4-203ENST00000442234 ZNF268Q14587 947 aaPredicted RBP2.96□□□□□ -1.93
LIG4-203ENST00000442234 ANKRD1Q15327 319 aa2.96□□□□□ -1.93
LIG4-203ENST00000442234 CCDC157Q569K6 752 aa2.96□□□□□ -1.93
LIG4-203ENST00000442234 MAP3K21Q5TCX8 1036 aa2.96□□□□□ -1.93
LIG4-203ENST00000442234 ZNF697Q5TEC3 545 aa2.96□□□□□ -1.93
LIG4-203ENST00000442234 SYDE2Q5VT97 1194 aa2.96□□□□□ -1.93
LIG4-203ENST00000442234 DAB2IPQ5VWQ8 1189 aa2.96□□□□□ -1.93
LIG4-203ENST00000442234 NEK5Q6P3R8 708 aa2.96□□□□□ -1.93
LIG4-203ENST00000442234 TUBA3EQ6PEY2 450 aa2.96□□□□□ -1.93
LIG4-203ENST00000442234 C6orf89Q6UWU4 347 aa2.96□□□□□ -1.93
LIG4-203ENST00000442234 CNGA4Q8IV77 575 aa2.96□□□□□ -1.93
LIG4-203ENST00000442234 SAMD14Q8IZD0 417 aaPredicted RBP2.96□□□□□ -1.93
LIG4-203ENST00000442234 FAM9CQ8IZT9 166 aa2.96□□□□□ -1.93
LIG4-203ENST00000442234 CYP4X1Q8N118 509 aa2.96□□□□□ -1.93
LIG4-203ENST00000442234 MLKLQ8NB16 471 aa2.96□□□□□ -1.93
LIG4-203ENST00000442234 RBBP8NLQ8NC74 664 aaPredicted RBP2.96□□□□□ -1.93
LIG4-203ENST00000442234 NSUN7Q8NE18 718 aaKnown RBP2.96□□□□□ -1.93
LIG4-203ENST00000442234 LINS1Q8NG48 757 aa2.96□□□□□ -1.93
LIG4-203ENST00000442234 TTLL11Q8NHH1 800 aa2.96□□□□□ -1.93
LIG4-203ENST00000442234 TBC1D16Q8TBP0 767 aa2.96□□□□□ -1.93
LIG4-203ENST00000442234 U2AF1L4Q8WU68 220 aaKnown RBP2.96□□□□□ -1.93
LIG4-203ENST00000442234 UCMAQ8WVF2 138 aa2.96□□□□□ -1.93
LIG4-203ENST00000442234 DPF2Q92785 391 aa2.96□□□□□ -1.93
LIG4-203ENST00000442234 DACT3Q96B18 629 aaPredicted RBP2.96□□□□□ -1.93
LIG4-203ENST00000442234 ANKRD36BP1Q96IX9 119 aa2.96□□□□□ -1.93
LIG4-203ENST00000442234 NSMCE3Q96MG7 304 aa2.96□□□□□ -1.93
LIG4-203ENST00000442234 CEP63Q96MT8 703 aa2.96□□□□□ -1.93
LIG4-203ENST00000442234 FERD3LQ96RJ6 166 aa2.96□□□□□ -1.93
LIG4-203ENST00000442234 DDX50Q9BQ39 737 aaKnown RBP2.96□□□□□ -1.93
LIG4-203ENST00000442234 REPIN1Q9BWE0 567 aaKnown RBP2.96□□□□□ -1.93
LIG4-203ENST00000442234 SPATA16Q9BXB7 569 aa2.96□□□□□ -1.93
LIG4-203ENST00000442234 KRT23Q9C075 422 aa2.96□□□□□ -1.93
LIG4-203ENST00000442234 TPK1Q9H3S4 243 aa2.96□□□□□ -1.93
LIG4-203ENST00000442234 RNPEPL1Q9HAU8 725 aa2.96□□□□□ -1.93
LIG4-203ENST00000442234 GINM1Q9NU53 330 aa2.96□□□□□ -1.93
LIG4-203ENST00000442234 TCP11L1Q9NUJ3 509 aa2.96□□□□□ -1.93
LIG4-203ENST00000442234 FKBP14Q9NWM8 211 aa2.96□□□□□ -1.93
LIG4-203ENST00000442234 CLIC5Q9NZA1 410 aa2.96□□□□□ -1.93
LIG4-203ENST00000442234 ATPIF1Q9UII2 106 aa2.96□□□□□ -1.93
LIG4-203ENST00000442234 HBS1LQ9Y450 684 aaKnown RBP2.96□□□□□ -1.93
LIG4-203ENST00000442234 PABPN1LA6NDY0 278 aaKnown RBP2.96□□□□□ -1.94
LIG4-203ENST00000442234 TTC34A8MYJ7 566 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 CA12O43570 354 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 TMCC2O75069 709 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 ASLP04424 464 aa2.96□□□□□ -1.94
LIG4-203ENST00000442234 CCL5P13501 91 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms