RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 GRM7Q14831 915 aa6.39□□□□□ -1.39
PFDN4-202ENST00000441080 FAM102BQ5T8I3 360 aa6.39□□□□□ -1.39
PFDN4-202ENST00000441080 TCTN3Q6NUS6 607 aa6.39□□□□□ -1.39
PFDN4-202ENST00000441080 PDZD4Q76G19 769 aaPredicted RBP6.39□□□□□ -1.39
PFDN4-202ENST00000441080 CATIPQ7Z7H3 387 aa6.39□□□□□ -1.39
PFDN4-202ENST00000441080 MDM1Q8TC05 714 aa6.39□□□□□ -1.39
PFDN4-202ENST00000441080 TSR2Q969E8 191 aaKnown RBP6.39□□□□□ -1.39
PFDN4-202ENST00000441080 IL17RAQ96F46 866 aa6.39□□□□□ -1.39
PFDN4-202ENST00000441080 PDCD2LQ9BRP1 358 aa6.39□□□□□ -1.39
PFDN4-202ENST00000441080 ENKD1Q9H0I2 346 aa6.39□□□□□ -1.39
PFDN4-202ENST00000441080 EPC1Q9H2F5 836 aa6.39□□□□□ -1.39
PFDN4-202ENST00000441080 MANSC1Q9H8J5 431 aa6.39□□□□□ -1.39
PFDN4-202ENST00000441080 LANCL2Q9NS86 450 aa6.39□□□□□ -1.39
PFDN4-202ENST00000441080 ZFR2Q9UPR6 939 aaKnown RBP6.39□□□□□ -1.39
PFDN4-202ENST00000441080 RAD17O75943 681 aa6.38□□□□□ -1.39
PFDN4-202ENST00000441080 PTPN7P35236 360 aa6.38□□□□□ -1.39
PFDN4-202ENST00000441080 SLC6A9P48067 706 aa6.38□□□□□ -1.39
PFDN4-202ENST00000441080 IL10RAQ13651 578 aa6.38□□□□□ -1.39
PFDN4-202ENST00000441080 PRAMEF14Q5SWL7 426 aa6.38□□□□□ -1.39
PFDN4-202ENST00000441080 IFIT1BQ5T764 474 aaKnown RBP6.38□□□□□ -1.39
PFDN4-202ENST00000441080 PPP4R3AQ6IN85 833 aa6.38□□□□□ -1.39
PFDN4-202ENST00000441080 CXorf57Q6NSI4 855 aaKnown RBP6.38□□□□□ -1.39
PFDN4-202ENST00000441080 FAM111BQ6SJ93 734 aa6.38□□□□□ -1.39
PFDN4-202ENST00000441080 WDR75Q8IWA0 830 aaKnown RBP6.38□□□□□ -1.39
PFDN4-202ENST00000441080 TRMT2AQ8IZ69 625 aaKnown RBP6.38□□□□□ -1.39
PFDN4-202ENST00000441080 FUKQ8N0W3 1084 aa6.38□□□□□ -1.39
PFDN4-202ENST00000441080 REPS2Q8NFH8 660 aa6.38□□□□□ -1.39
PFDN4-202ENST00000441080 FBXO18Q8NFZ0 1043 aa6.38□□□□□ -1.39
PFDN4-202ENST00000441080 LRGUKQ96M69 825 aa6.38□□□□□ -1.39
PFDN4-202ENST00000441080 AIFM3Q96NN9 605 aa6.38□□□□□ -1.39
PFDN4-202ENST00000441080 BDH2Q9BUT1 245 aa6.38□□□□□ -1.39
PFDN4-202ENST00000441080 SENP6Q9GZR1 1112 aaPredicted RBP6.38□□□□□ -1.39
PFDN4-202ENST00000441080 LDAHQ9H6V9 325 aa6.38□□□□□ -1.39
PFDN4-202ENST00000441080 PLA2G3Q9NZ20 509 aa6.38□□□□□ -1.39
PFDN4-202ENST00000441080 CHPF2Q9P2E5 772 aa6.38□□□□□ -1.39
PFDN4-202ENST00000441080 SIK3Q9Y2K2 1263 aa6.38□□□□□ -1.39
PFDN4-202ENST00000441080 PCDHA13Q9Y5I0 950 aa6.38□□□□□ -1.39
PFDN4-202ENST00000441080 SLC30A1Q9Y6M5 507 aa6.38□□□□□ -1.39
PFDN4-202ENST00000441080 FOXS1O43638 330 aa6.37□□□□□ -1.39
PFDN4-202ENST00000441080 OFD1O75665 1012 aa6.37□□□□□ -1.39
PFDN4-202ENST00000441080 ITGB3P05106 788 aa6.37□□□□□ -1.39
PFDN4-202ENST00000441080 POU2F2P09086 479 aa6.37□□□□□ -1.39
PFDN4-202ENST00000441080 U2AF1L5P0DN76 240 aaPredicted RBP6.37□□□□□ -1.39
PFDN4-202ENST00000441080 PDCP20941 246 aa6.37□□□□□ -1.39
PFDN4-202ENST00000441080 MSX2P35548 267 aaPredicted RBP6.37□□□□□ -1.39
PFDN4-202ENST00000441080 U2AF1Q01081 240 aaKnown RBP eCLIP6.37□□□□□ -1.39
PFDN4-202ENST00000441080 APBA1Q02410 837 aa6.37□□□□□ -1.39
PFDN4-202ENST00000441080 FBLN7Q53RD9 439 aa6.37□□□□□ -1.39
PFDN4-202ENST00000441080 NXNQ6DKJ4 435 aa6.37□□□□□ -1.39
PFDN4-202ENST00000441080 LILRA6Q6PI73 481 aa6.37□□□□□ -1.39
PFDN4-202ENST00000441080 USP45Q70EL2 814 aa6.37□□□□□ -1.39
PFDN4-202ENST00000441080 TCEAL8Q8IYN2 117 aa6.37□□□□□ -1.39
PFDN4-202ENST00000441080 MYO1HQ8N1T3 1032 aa6.37□□□□□ -1.39
PFDN4-202ENST00000441080 CCHCR1Q8TD31 782 aa6.37□□□□□ -1.39
PFDN4-202ENST00000441080 KAT5Q92993 513 aa6.37□□□□□ -1.39
PFDN4-202ENST00000441080 CYFIP2Q96F07 1278 aa6.37□□□□□ -1.39
PFDN4-202ENST00000441080 C20orf173Q96LM9 149 aa6.37□□□□□ -1.39
PFDN4-202ENST00000441080 SSBP3Q9BWW4 388 aaPredicted RBP6.37□□□□□ -1.39
PFDN4-202ENST00000441080 GTPBP4Q9BZE4 634 aaKnown RBP6.37□□□□□ -1.39
PFDN4-202ENST00000441080 NMRK2Q9NPI5 230 aa6.37□□□□□ -1.39
PFDN4-202ENST00000441080 TDP1Q9NUW8 608 aa6.37□□□□□ -1.39
PFDN4-202ENST00000441080 RAPGEFL1Q9UHV5 662 aa6.37□□□□□ -1.39
PFDN4-202ENST00000441080 ZMYM3Q14202 1370 aa6.36□□□□□ -1.39
PFDN4-202ENST00000441080 HOXA3O43365 443 aaPredicted RBP6.36□□□□□ -1.39
PFDN4-202ENST00000441080 PRPF3O43395 683 aaKnown RBP6.36□□□□□ -1.39
PFDN4-202ENST00000441080 MARCH6O60337 910 aa6.36□□□□□ -1.39
PFDN4-202ENST00000441080 STC2O76061 302 aa6.36□□□□□ -1.39
PFDN4-202ENST00000441080 RPLP2P05387 115 aaKnown RBP6.36□□□□□ -1.39
PFDN4-202ENST00000441080 HSPA6P17066 643 aa6.36□□□□□ -1.39
PFDN4-202ENST00000441080 CTSWP56202 376 aa6.36□□□□□ -1.39
PFDN4-202ENST00000441080 MRPL49Q13405 166 aaKnown RBP6.36□□□□□ -1.39
PFDN4-202ENST00000441080 GTF2H3Q13889 308 aa6.36□□□□□ -1.39
PFDN4-202ENST00000441080 MLC1Q15049 377 aa6.36□□□□□ -1.39
PFDN4-202ENST00000441080 FAM214AQ32MH5 1076 aa6.36□□□□□ -1.39
PFDN4-202ENST00000441080 FKBP15Q5T1M5 1219 aa6.36□□□□□ -1.39
PFDN4-202ENST00000441080 ERICH6BQ5W0A0 696 aa6.36□□□□□ -1.39
PFDN4-202ENST00000441080 POLNQ7Z5Q5 900 aa6.36□□□□□ -1.39
PFDN4-202ENST00000441080 RSPH3Q86UC2 560 aa6.36□□□□□ -1.39
PFDN4-202ENST00000441080 MAGEB6Q8N7X4 407 aa6.36□□□□□ -1.39
PFDN4-202ENST00000441080 RAB24Q969Q5 203 aa6.36□□□□□ -1.39
PFDN4-202ENST00000441080 CLIP3Q96DZ5 547 aa6.36□□□□□ -1.39
PFDN4-202ENST00000441080 ZNF512Q96ME7 567 aaPredicted RBP6.36□□□□□ -1.39
PFDN4-202ENST00000441080 RBM15Q96T37 977 aaKnown RBP eCLIP6.36□□□□□ -1.393e-10■□□□□ 10.7
PFDN4-202ENST00000441080 KRTAP9-9Q9BYP9 154 aa6.36□□□□□ -1.39
PFDN4-202ENST00000441080 KRTAP9-4Q9BYQ2 154 aa6.36□□□□□ -1.39
PFDN4-202ENST00000441080 TMEM140Q9NV12 185 aa6.36□□□□□ -1.39
PFDN4-202ENST00000441080 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.36□□□□□ -1.39
PFDN4-202ENST00000441080 AJAP1Q9UKB5 411 aaPredicted RBP6.36□□□□□ -1.39
PFDN4-202ENST00000441080 CFAP20Q9Y6A4 193 aaKnown RBP6.36□□□□□ -1.39
PFDN4-202ENST00000441080 MYBBP1AQ9BQG0 1328 aaKnown RBP6.35□□□□□ -1.39
PFDN4-202ENST00000441080 PATE3B3GLJ2 98 aa6.35□□□□□ -1.39
PFDN4-202ENST00000441080 AP1G1O43747 822 aa6.35□□□□□ -1.39
PFDN4-202ENST00000441080 SGTAO43765 313 aa6.35□□□□□ -1.39
PFDN4-202ENST00000441080 GPR32O75388 356 aa6.35□□□□□ -1.39
PFDN4-202ENST00000441080 IL2RBP14784 551 aa6.35□□□□□ -1.39
PFDN4-202ENST00000441080 LPOP22079 712 aaPredicted RBP6.35□□□□□ -1.39
PFDN4-202ENST00000441080 GUCY1A2P33402 732 aa6.35□□□□□ -1.39
PFDN4-202ENST00000441080 FLT3LGP49771 235 aa6.35□□□□□ -1.39
PFDN4-202ENST00000441080 CDC42EP1Q00587 391 aa6.35□□□□□ -1.39
PFDN4-202ENST00000441080 FOXL1Q12952 345 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms