RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 FHOD1Q9Y613 1164 aa20.76■□□□□ 0.91
SNX17-203ENST00000440760 ABLIM1O14639 778 aa20.75■□□□□ 0.91
SNX17-203ENST00000440760 FKTNO75072 461 aa20.75■□□□□ 0.91
SNX17-203ENST00000440760 LRRN2O75325 713 aa20.75■□□□□ 0.91
SNX17-203ENST00000440760 PRPF4BQ13523 1007 aaKnown RBP20.75■□□□□ 0.91
SNX17-203ENST00000440760 TMEM132AQ24JP5 1023 aa20.75■□□□□ 0.91
SNX17-203ENST00000440760 EEF1DP3Q658K8 133 aa20.75■□□□□ 0.91
SNX17-203ENST00000440760 LMBRD2Q68DH5 695 aaPredicted RBP20.75■□□□□ 0.91
SNX17-203ENST00000440760 TRIM65Q6PJ69 517 aa20.75■□□□□ 0.91
SNX17-203ENST00000440760 CCAR2Q8N163 923 aaKnown RBP20.75■□□□□ 0.91
SNX17-203ENST00000440760 ZNF397Q8NF99 534 aaPredicted RBP20.75■□□□□ 0.91
SNX17-203ENST00000440760 MFSD14AQ96MC6 490 aa20.75■□□□□ 0.91
SNX17-203ENST00000440760 TCHPQ9BT92 498 aa20.75■□□□□ 0.91
SNX17-203ENST00000440760 NAA15Q9BXJ9 866 aaKnown RBP20.75■□□□□ 0.91
SNX17-203ENST00000440760 GTPBP10A4D1E9 387 aaKnown RBP20.74■□□□□ 0.91
SNX17-203ENST00000440760 MBLAC1A4D2B0 266 aaPredicted RBP20.74■□□□□ 0.91
SNX17-203ENST00000440760 ACKR2O00590 384 aa20.74■□□□□ 0.91
SNX17-203ENST00000440760 CLDN3O15551 220 aa20.74■□□□□ 0.91
SNX17-203ENST00000440760 TOM1L1O75674 476 aa20.74■□□□□ 0.91
SNX17-203ENST00000440760 ADAM17P78536 824 aa20.74■□□□□ 0.91
SNX17-203ENST00000440760 SLFN12LQ6IEE8 588 aa20.74■□□□□ 0.91
SNX17-203ENST00000440760 PDXDC1Q6P996 788 aa20.74■□□□□ 0.91
SNX17-203ENST00000440760 IQCDQ96DY2 449 aa20.74■□□□□ 0.91
SNX17-203ENST00000440760 ERO1AQ96HE7 468 aa20.74■□□□□ 0.91
SNX17-203ENST00000440760 NFKBIZQ9BYH8 718 aa20.74■□□□□ 0.91
SNX17-203ENST00000440760 TMEM117Q9H0C3 514 aa20.74■□□□□ 0.91
SNX17-203ENST00000440760 SPC25Q9HBM1 224 aa20.74■□□□□ 0.91
SNX17-203ENST00000440760 ZNF233A6NK53 670 aa20.74■□□□□ 0.91
SNX17-203ENST00000440760 FGFR4P22455 802 aa20.74■□□□□ 0.91
SNX17-203ENST00000440760 TNFSF9P41273 254 aa20.74■□□□□ 0.91
SNX17-203ENST00000440760 MXI1P50539 228 aa20.74■□□□□ 0.91
SNX17-203ENST00000440760 AMHR2Q16671 573 aa20.74■□□□□ 0.91
SNX17-203ENST00000440760 MAP3K21Q5TCX8 1036 aa20.74■□□□□ 0.91
SNX17-203ENST00000440760 ATF7IP2Q5U623 682 aa20.74■□□□□ 0.91
SNX17-203ENST00000440760 KLHDC7AQ5VTJ3 777 aa20.74■□□□□ 0.91
SNX17-203ENST00000440760 CYP26C1Q6V0L0 522 aa20.74■□□□□ 0.91
SNX17-203ENST00000440760 C7orf31Q8N865 590 aa20.74■□□□□ 0.91
SNX17-203ENST00000440760 MTG1Q9BT17 334 aaPredicted RBP20.74■□□□□ 0.91
SNX17-203ENST00000440760 INTS2Q9H0H0 1204 aaKnown RBP20.74■□□□□ 0.91
SNX17-203ENST00000440760 PLCB1Q9NQ66 1216 aa20.74■□□□□ 0.91
SNX17-203ENST00000440760 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.74■□□□□ 0.913e-7■■■■■ 153.3
SNX17-203ENST00000440760 C17orf102A2RUQ5 167 aa20.73■□□□□ 0.91
SNX17-203ENST00000440760 UCHL3P15374 230 aa20.73■□□□□ 0.91
SNX17-203ENST00000440760 CLCN1P35523 988 aa20.73■□□□□ 0.91
SNX17-203ENST00000440760 KCNJ6P48051 423 aa20.73■□□□□ 0.91
SNX17-203ENST00000440760 MAP2K1Q02750 393 aaPredicted RBP20.73■□□□□ 0.91
SNX17-203ENST00000440760 MEA1Q16626 185 aa20.73■□□□□ 0.91
SNX17-203ENST00000440760 ZNF568Q3ZCX4 644 aa20.73■□□□□ 0.91
SNX17-203ENST00000440760 DNAJB3Q8WWF6 145 aa20.73■□□□□ 0.91
SNX17-203ENST00000440760 CPB2Q96IY4 423 aa20.73■□□□□ 0.91
SNX17-203ENST00000440760 PDE11AQ9HCR9 933 aa20.73■□□□□ 0.91
SNX17-203ENST00000440760 RBAKQ9NYW8 714 aaPredicted RBP20.73■□□□□ 0.91
SNX17-203ENST00000440760 PTPRJQ12913 1337 aa20.72■□□□□ 0.91
SNX17-203ENST00000440760 ZEB2O60315 1214 aa20.72■□□□□ 0.91
SNX17-203ENST00000440760 FAM189A1O60320 539 aa20.72■□□□□ 0.91
SNX17-203ENST00000440760 PLEKP08567 350 aaPredicted RBP20.72■□□□□ 0.91
SNX17-203ENST00000440760 TSR1Q2NL82 804 aaKnown RBP20.72■□□□□ 0.91
SNX17-203ENST00000440760 TSHZ1Q6ZSZ6 1077 aa20.72■□□□□ 0.91
SNX17-203ENST00000440760 IFNLR1Q8IU57 520 aaPredicted RBP20.72■□□□□ 0.91
SNX17-203ENST00000440760 TMTC1Q8IUR5 882 aa20.72■□□□□ 0.91
SNX17-203ENST00000440760 PPP1R13BQ96KQ4 1090 aa20.72■□□□□ 0.91
SNX17-203ENST00000440760 CDHR5Q9HBB8 845 aa20.72■□□□□ 0.91
SNX17-203ENST00000440760 PRMT7Q9NVM4 692 aaPredicted RBP20.72■□□□□ 0.91
SNX17-203ENST00000440760 SMIM35A0A1B0GVV1 85 aa20.72■□□□□ 0.91
SNX17-203ENST00000440760 PROZP22891 400 aa20.72■□□□□ 0.91
SNX17-203ENST00000440760 POU5F1BQ06416 359 aa20.72■□□□□ 0.91
SNX17-203ENST00000440760 MCL1Q07820 350 aa20.72■□□□□ 0.91
SNX17-203ENST00000440760 RAPGEF1Q13905 1077 aa20.72■□□□□ 0.91
SNX17-203ENST00000440760 NBPF20Q3BBV1 942 aa20.72■□□□□ 0.91
SNX17-203ENST00000440760 MPZL3Q6UWV2 235 aa20.72■□□□□ 0.91
SNX17-203ENST00000440760 CEP120Q8N960 986 aa20.72■□□□□ 0.91
SNX17-203ENST00000440760 ACRBPQ8NEB7 543 aa20.72■□□□□ 0.91
SNX17-203ENST00000440760 TMC2Q8TDI7 906 aa20.72■□□□□ 0.91
SNX17-203ENST00000440760 ADAMTS10Q9H324 1103 aa20.72■□□□□ 0.91
SNX17-203ENST00000440760 KIAA1586Q9HCI6 787 aa20.72■□□□□ 0.91
SNX17-203ENST00000440760 SAGE1Q9NXZ1 904 aa20.72■□□□□ 0.91
SNX17-203ENST00000440760 FRMPD3Q5JV73 1810 aa20.72■□□□□ 0.91
SNX17-203ENST00000440760 CNTNAP2Q9UHC6 1331 aa20.71■□□□□ 0.91
SNX17-203ENST00000440760 KIAA0391O15091 583 aaKnown RBP20.71■□□□□ 0.91
SNX17-203ENST00000440760 INHAP05111 366 aa20.71■□□□□ 0.91
SNX17-203ENST00000440760 ASGR1P07306 291 aa20.71■□□□□ 0.91
SNX17-203ENST00000440760 EPC2Q52LR7 807 aa20.71■□□□□ 0.91
SNX17-203ENST00000440760 IQCEQ6IPM2 695 aa20.71■□□□□ 0.91
SNX17-203ENST00000440760 LMO3Q8TAP4 145 aa20.71■□□□□ 0.91
SNX17-203ENST00000440760 ELMO3Q96BJ8 720 aa20.71■□□□□ 0.91
SNX17-203ENST00000440760 C16orf45Q96MC5 204 aaPredicted RBP20.71■□□□□ 0.91
SNX17-203ENST00000440760 OSMRQ99650 979 aa20.71■□□□□ 0.91
SNX17-203ENST00000440760 CDT1Q9H211 546 aa20.71■□□□□ 0.91
SNX17-203ENST00000440760 PTPRHQ9HD43 1115 aa20.71■□□□□ 0.91
SNX17-203ENST00000440760 ZNHIT6Q9NWK9 470 aaKnown RBP20.71■□□□□ 0.91
SNX17-203ENST00000440760 PLAGL2Q9UPG8 496 aa20.71■□□□□ 0.91
SNX17-203ENST00000440760 A0A0U1RQJ8 604 aa20.7■□□□□ 0.9
SNX17-203ENST00000440760 N4BP1O75113 896 aaKnown RBP20.7■□□□□ 0.9
SNX17-203ENST00000440760 GPR32O75388 356 aa20.7■□□□□ 0.9
SNX17-203ENST00000440760 PNMA6AP0CW24 399 aaPredicted RBP20.7■□□□□ 0.9
SNX17-203ENST00000440760 HOXC8P31273 242 aa20.7■□□□□ 0.9
SNX17-203ENST00000440760 OSTNP61366 133 aa20.7■□□□□ 0.9
SNX17-203ENST00000440760 PSMD6Q15008 389 aa20.7■□□□□ 0.9
SNX17-203ENST00000440760 KCNA10Q16322 511 aa20.7■□□□□ 0.9
SNX17-203ENST00000440760 ZNF410Q86VK4 478 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms