RNA–Protein interactions for RNA: ENST00000439986.8

CCBE1-202, Transcript of collagen and calcium binding EGF domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCBE1, Length 6,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-202ENST00000439986 POLR2BP30876 1174 aaKnown RBP12.29□□□□□ -0.44
CCBE1-202ENST00000439986 IRAK1P51617 712 aa12.29□□□□□ -0.44
CCBE1-202ENST00000439986 SIK1P57059 783 aa12.29□□□□□ -0.44
CCBE1-202ENST00000439986 PPP2R2AP63151 447 aa12.29□□□□□ -0.44
CCBE1-202ENST00000439986 RASIP1Q5U651 963 aa12.29□□□□□ -0.44
CCBE1-202ENST00000439986 ZNF713Q8N859 430 aaPredicted RBP12.29□□□□□ -0.44
CCBE1-202ENST00000439986 ZNF483Q8TF39 744 aaPredicted RBP12.29□□□□□ -0.44
CCBE1-202ENST00000439986 SRPK1Q96SB4 655 aaKnown RBP12.29□□□□□ -0.44
CCBE1-202ENST00000439986 Q9H521 79 aa12.29□□□□□ -0.44
CCBE1-202ENST00000439986 PVALEFA0A1B0GWK0 134 aa12.29□□□□□ -0.44
CCBE1-202ENST00000439986 GOLGA8CPA6NN73 597 aa12.29□□□□□ -0.44
CCBE1-202ENST00000439986 H3BQF6 201 aa12.29□□□□□ -0.44
CCBE1-202ENST00000439986 EEF1B2P24534 225 aaKnown RBP12.29□□□□□ -0.44
CCBE1-202ENST00000439986 ACAT1P24752 427 aaKnown RBP12.29□□□□□ -0.44
CCBE1-202ENST00000439986 EPHB1P54762 984 aa12.29□□□□□ -0.44
CCBE1-202ENST00000439986 Q4G0T1 1027 aa12.29□□□□□ -0.44
CCBE1-202ENST00000439986 C6orf118Q5T5N4 469 aa12.29□□□□□ -0.44
CCBE1-202ENST00000439986 SAMD14Q8IZD0 417 aaPredicted RBP12.29□□□□□ -0.44
CCBE1-202ENST00000439986 MUSKO15146 869 aa12.29□□□□□ -0.44
CCBE1-202ENST00000439986 SSTR3P32745 418 aaPredicted RBP12.29□□□□□ -0.44
CCBE1-202ENST00000439986 MSH2P43246 934 aa12.29□□□□□ -0.44
CCBE1-202ENST00000439986 KCNB1Q14721 858 aa12.29□□□□□ -0.44
CCBE1-202ENST00000439986 GPATCH4Q5T3I0 446 aaKnown RBP12.29□□□□□ -0.44
CCBE1-202ENST00000439986 L1RE1Q9UN81 338 aa12.29□□□□□ -0.44
CCBE1-202ENST00000439986 PCP4L1A6NKN8 68 aa12.29□□□□□ -0.44
CCBE1-202ENST00000439986 MYO1FO00160 1098 aa12.29□□□□□ -0.44
CCBE1-202ENST00000439986 AP3D1O14617 1153 aa12.29□□□□□ -0.44
CCBE1-202ENST00000439986 HOXA7P31268 230 aaPredicted RBP12.29□□□□□ -0.44
CCBE1-202ENST00000439986 ADCY2Q08462 1091 aa12.29□□□□□ -0.44
CCBE1-202ENST00000439986 CTTNQ14247 550 aaKnown RBP12.29□□□□□ -0.44
CCBE1-202ENST00000439986 MAML1Q92585 1016 aa12.29□□□□□ -0.44
CCBE1-202ENST00000439986 CNDP1Q96KN2 507 aa12.29□□□□□ -0.44
CCBE1-202ENST00000439986 B3GALT6Q96L58 329 aa12.29□□□□□ -0.44
CCBE1-202ENST00000439986 SUCLA2Q9P2R7 463 aaPredicted RBP12.29□□□□□ -0.44
CCBE1-202ENST00000439986 HPSEQ9Y251 543 aa12.29□□□□□ -0.44
CCBE1-202ENST00000439986 ORC6Q9Y5N6 252 aa12.29□□□□□ -0.44
CCBE1-202ENST00000439986 HDLBPQ00341 1268 aaKnown RBP12.29□□□□□ -0.44
CCBE1-202ENST00000439986 SYCP2LQ5T4T6 812 aa12.29□□□□□ -0.44
CCBE1-202ENST00000439986 PROM2Q8N271 834 aa12.29□□□□□ -0.44
CCBE1-202ENST00000439986 PHF20Q9BVI0 1012 aa12.29□□□□□ -0.44
CCBE1-202ENST00000439986 GRID2IPA4D2P6 1211 aa12.28□□□□□ -0.44
CCBE1-202ENST00000439986 MCF2LO15068 1137 aa12.28□□□□□ -0.44
CCBE1-202ENST00000439986 SRGNP10124 158 aa12.28□□□□□ -0.44
CCBE1-202ENST00000439986 CORO7P57737 925 aa12.28□□□□□ -0.44
CCBE1-202ENST00000439986 C1orf94Q6P1W5 598 aa12.28□□□□□ -0.44
CCBE1-202ENST00000439986 TFR2Q9UP52 801 aa12.28□□□□□ -0.44
CCBE1-202ENST00000439986 PI4K2BG5E9Z4 385 aa12.28□□□□□ -0.44
CCBE1-202ENST00000439986 CDC37Q16543 378 aaPredicted RBP12.28□□□□□ -0.44
CCBE1-202ENST00000439986 MAP3K20Q9NYL2 800 aaKnown RBP12.28□□□□□ -0.44
CCBE1-202ENST00000439986 NPR1P16066 1061 aa12.28□□□□□ -0.44
CCBE1-202ENST00000439986 POLE2P56282 527 aa12.28□□□□□ -0.44
CCBE1-202ENST00000439986 ATAD3BQ5T9A4 648 aa12.28□□□□□ -0.44
CCBE1-202ENST00000439986 KLC4Q9NSK0 619 aa12.28□□□□□ -0.44
CCBE1-202ENST00000439986 CEMIPQ8WUJ3 1361 aa12.28□□□□□ -0.44
CCBE1-202ENST00000439986 PTPRUQ92729 1446 aa12.28□□□□□ -0.44
CCBE1-202ENST00000439986 H0Y626 953 aa12.28□□□□□ -0.44
CCBE1-202ENST00000439986 EVI5O60447 810 aa12.28□□□□□ -0.44
CCBE1-202ENST00000439986 TRIM16O95361 564 aa12.28□□□□□ -0.44
CCBE1-202ENST00000439986 ACSL3O95573 720 aa12.28□□□□□ -0.44
CCBE1-202ENST00000439986 ANXA13P27216 316 aa12.28□□□□□ -0.44
CCBE1-202ENST00000439986 NEK5Q6P3R8 708 aa12.28□□□□□ -0.44
CCBE1-202ENST00000439986 MARCH10Q8NA82 808 aaPredicted RBP12.28□□□□□ -0.44
CCBE1-202ENST00000439986 HIPK4Q8NE63 616 aa12.28□□□□□ -0.44
CCBE1-202ENST00000439986 ACCSQ96QU6 501 aa12.28□□□□□ -0.44
CCBE1-202ENST00000439986 SLITRK6Q9H5Y7 841 aa12.28□□□□□ -0.44
CCBE1-202ENST00000439986 SLAIN2Q9P270 581 aa12.28□□□□□ -0.44
CCBE1-202ENST00000439986 PRR12Q9ULL5 1215 aa12.28□□□□□ -0.44
CCBE1-202ENST00000439986 CBY1Q9Y3M2 126 aa12.28□□□□□ -0.44
CCBE1-202ENST00000439986 COPG1Q9Y678 874 aaKnown RBP12.28□□□□□ -0.44
CCBE1-202ENST00000439986 CDHR2Q9BYE9 1310 aa12.28□□□□□ -0.44
CCBE1-202ENST00000439986 SYCE1LA8MT33 242 aa12.27□□□□□ -0.44
CCBE1-202ENST00000439986 XPOTO43592 962 aaKnown RBP12.27□□□□□ -0.44
CCBE1-202ENST00000439986 UCMAQ8WVF2 138 aa12.27□□□□□ -0.44
CCBE1-202ENST00000439986 FAM49AQ9H0Q0 323 aaPredicted RBP12.27□□□□□ -0.44
CCBE1-202ENST00000439986 VRTNQ9H8Y1 702 aa12.27□□□□□ -0.44
CCBE1-202ENST00000439986 SMARCAL1Q9NZC9 954 aa12.27□□□□□ -0.44
CCBE1-202ENST00000439986 KITP10721 976 aa12.27□□□□□ -0.44
CCBE1-202ENST00000439986 PDIA6Q15084 440 aa12.27□□□□□ -0.44
CCBE1-202ENST00000439986 TRIM65Q6PJ69 517 aa12.27□□□□□ -0.44
CCBE1-202ENST00000439986 TRIM67Q6ZTA4 783 aa12.27□□□□□ -0.44
CCBE1-202ENST00000439986 TRIM74Q86UV6 250 aa12.27□□□□□ -0.44
CCBE1-202ENST00000439986 TRIM73Q86UV7 250 aa12.27□□□□□ -0.44
CCBE1-202ENST00000439986 MAP7D3Q8IWC1 876 aa12.27□□□□□ -0.44
CCBE1-202ENST00000439986 ELOA2Q8IYF1 753 aaPredicted RBP12.27□□□□□ -0.44
CCBE1-202ENST00000439986 GUF1Q8N442 669 aaKnown RBP12.27□□□□□ -0.44
CCBE1-202ENST00000439986 PDCD6IPQ8WUM4 868 aaKnown RBP12.27□□□□□ -0.44
CCBE1-202ENST00000439986 MS4A14Q96JA4 679 aa12.27□□□□□ -0.44
CCBE1-202ENST00000439986 ZNF668Q96K58 619 aaPredicted RBP12.27□□□□□ -0.44
CCBE1-202ENST00000439986 AMNQ9BXJ7 453 aa12.27□□□□□ -0.44
CCBE1-202ENST00000439986 NEUROD4Q9HD90 331 aa12.27□□□□□ -0.44
CCBE1-202ENST00000439986 NOP53Q9NZM5 478 aaKnown RBP12.27□□□□□ -0.44
CCBE1-202ENST00000439986 GAP43P17677 238 aa12.27□□□□□ -0.45
CCBE1-202ENST00000439986 STAT2P52630 851 aa12.27□□□□□ -0.45
CCBE1-202ENST00000439986 AP1M2Q9Y6Q5 423 aa12.27□□□□□ -0.45
CCBE1-202ENST00000439986 POTEFA5A3E0 1075 aa12.27□□□□□ -0.45
CCBE1-202ENST00000439986 UBE2Q2LH0YL09 131 aa12.27□□□□□ -0.45
CCBE1-202ENST00000439986 PRLP01236 227 aa12.27□□□□□ -0.45
CCBE1-202ENST00000439986 HADHAP40939 763 aa12.27□□□□□ -0.45
CCBE1-202ENST00000439986 KCNH2Q12809 1159 aa12.27□□□□□ -0.45
CCBE1-202ENST00000439986 KIF19Q2TAC6 998 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms