RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 NDUFV1P49821 464 aa11.5□□□□□ -0.57
MCF2L-216ENST00000439475 YARSP54577 528 aaKnown RBP11.5□□□□□ -0.57
MCF2L-216ENST00000439475 HYAL1Q12794 435 aa11.5□□□□□ -0.57
MCF2L-216ENST00000439475 GRIK3Q13003 919 aa11.5□□□□□ -0.57
MCF2L-216ENST00000439475 MAPK7Q13164 816 aa11.5□□□□□ -0.57
MCF2L-216ENST00000439475 ADAM15Q13444 863 aa11.5□□□□□ -0.57
MCF2L-216ENST00000439475 MCM6Q14566 821 aa11.5□□□□□ -0.57
MCF2L-216ENST00000439475 SPECC1Q5M775 1068 aa11.5□□□□□ -0.57
MCF2L-216ENST00000439475 FOXD4L5Q5VV16 416 aaPredicted RBP11.5□□□□□ -0.57
MCF2L-216ENST00000439475 PLPP4Q5VZY2 271 aa11.5□□□□□ -0.57
MCF2L-216ENST00000439475 SV2BQ7L1I2 683 aa11.5□□□□□ -0.57
MCF2L-216ENST00000439475 DDX53Q86TM3 631 aaKnown RBP11.5□□□□□ -0.57
MCF2L-216ENST00000439475 RBM23Q86U06 439 aaKnown RBP11.5□□□□□ -0.57
MCF2L-216ENST00000439475 ZNF280BQ86YH2 543 aa11.5□□□□□ -0.57
MCF2L-216ENST00000439475 DAW1Q8N136 415 aa11.5□□□□□ -0.57
MCF2L-216ENST00000439475 MYCT1Q8N699 235 aa11.5□□□□□ -0.57
MCF2L-216ENST00000439475 LINC00301Q8NCQ3 95 aa11.5□□□□□ -0.57
MCF2L-216ENST00000439475 FOXD4L4Q8WXT5 416 aaPredicted RBP11.5□□□□□ -0.57
MCF2L-216ENST00000439475 EPSTI1Q96J88 318 aa11.5□□□□□ -0.57
MCF2L-216ENST00000439475 CLIC6Q96NY7 704 aa11.5□□□□□ -0.57
MCF2L-216ENST00000439475 ACO2Q99798 780 aaKnown RBP11.5□□□□□ -0.57
MCF2L-216ENST00000439475 CCDC94Q9BW85 323 aaPredicted RBP11.5□□□□□ -0.57
MCF2L-216ENST00000439475 COL25A1Q9BXS0 654 aaPredicted RBP11.5□□□□□ -0.57
MCF2L-216ENST00000439475 LRRC27Q9C0I9 530 aa11.5□□□□□ -0.57
MCF2L-216ENST00000439475 RNF39Q9H2S5 420 aa11.5□□□□□ -0.57
MCF2L-216ENST00000439475 NXF3Q9H4D5 531 aaKnown RBP11.5□□□□□ -0.57
MCF2L-216ENST00000439475 PDZD7Q9H5P4 517 aa11.5□□□□□ -0.57
MCF2L-216ENST00000439475 PARVGQ9HBI0 331 aa11.5□□□□□ -0.57
MCF2L-216ENST00000439475 BLOC1S4Q9NUP1 217 aa11.5□□□□□ -0.57
MCF2L-216ENST00000439475 SNTG2Q9NY99 539 aa11.5□□□□□ -0.57
MCF2L-216ENST00000439475 PLXNA4Q9HCM2 1894 aa11.5□□□□□ -0.57
MCF2L-216ENST00000439475 MYO7AQ13402 2215 aa11.5□□□□□ -0.57
MCF2L-216ENST00000439475 FSCN2O14926 492 aa11.49□□□□□ -0.57
MCF2L-216ENST00000439475 TRAK2O60296 914 aa11.49□□□□□ -0.57
MCF2L-216ENST00000439475 CUTAO60888 179 aa11.49□□□□□ -0.57
MCF2L-216ENST00000439475 THP07101 528 aa11.49□□□□□ -0.57
MCF2L-216ENST00000439475 STAT6P42226 847 aa11.49□□□□□ -0.57
MCF2L-216ENST00000439475 SLC11A1P49279 550 aa11.49□□□□□ -0.57
MCF2L-216ENST00000439475 SCNN1GP51170 649 aa11.49□□□□□ -0.57
MCF2L-216ENST00000439475 DUSP6Q16828 381 aa11.49□□□□□ -0.57
MCF2L-216ENST00000439475 CTC1Q2NKJ3 1217 aa11.49□□□□□ -0.57
MCF2L-216ENST00000439475 ARSHQ5FYA8 562 aa11.49□□□□□ -0.57
MCF2L-216ENST00000439475 NT5DC1Q5TFE4 455 aa11.49□□□□□ -0.57
MCF2L-216ENST00000439475 VPS52Q8N1B4 723 aa11.49□□□□□ -0.57
MCF2L-216ENST00000439475 EFHBQ8N7U6 833 aa11.49□□□□□ -0.57
MCF2L-216ENST00000439475 MRPL43Q8N983 215 aaKnown RBP11.49□□□□□ -0.57
MCF2L-216ENST00000439475 KCNG4Q8TDN1 519 aa11.49□□□□□ -0.57
MCF2L-216ENST00000439475 TOPORSQ9NS56 1045 aaPredicted RBP11.49□□□□□ -0.57
MCF2L-216ENST00000439475 MIOSQ9NXC5 875 aa11.49□□□□□ -0.57
MCF2L-216ENST00000439475 KLK14Q9P0G3 267 aa11.49□□□□□ -0.57
MCF2L-216ENST00000439475 DNAJB4Q9UDY4 337 aa11.49□□□□□ -0.57
MCF2L-216ENST00000439475 ATP6V1DQ9Y5K8 247 aa11.49□□□□□ -0.57
MCF2L-216ENST00000439475 TDRD15B5MCY1 1934 aaKnown RBP11.48□□□□□ -0.57
MCF2L-216ENST00000439475 NPHP3-ACAD11A0A0J9YXS1 232 aa11.48□□□□□ -0.57
MCF2L-216ENST00000439475 CLDN3O15551 220 aa11.48□□□□□ -0.57
MCF2L-216ENST00000439475 CTSAP10619 480 aa11.48□□□□□ -0.57
MCF2L-216ENST00000439475 MCF2P10911 925 aa11.48□□□□□ -0.57
MCF2L-216ENST00000439475 MATR3P43243 847 aaKnown RBP eCLIP11.48□□□□□ -0.57
MCF2L-216ENST00000439475 KCNQ1P51787 676 aa11.48□□□□□ -0.57
MCF2L-216ENST00000439475 AFF1P51825 1210 aaKnown RBP11.48□□□□□ -0.57
MCF2L-216ENST00000439475 AMPD3Q01432 767 aa11.48□□□□□ -0.57
MCF2L-216ENST00000439475 CACNB1Q02641 598 aaPredicted RBP11.48□□□□□ -0.57
MCF2L-216ENST00000439475 COL19A1Q14993 1142 aa11.48□□□□□ -0.57
MCF2L-216ENST00000439475 ZNF568Q3ZCX4 644 aa11.48□□□□□ -0.57
MCF2L-216ENST00000439475 EEF1DP3Q658K8 133 aa11.48□□□□□ -0.57
MCF2L-216ENST00000439475 PTCRAQ6ISU1 281 aaPredicted RBP11.48□□□□□ -0.57
MCF2L-216ENST00000439475 MPZL3Q6UWV2 235 aa11.48□□□□□ -0.57
MCF2L-216ENST00000439475 ZPBP2Q6X784 338 aa11.48□□□□□ -0.57
MCF2L-216ENST00000439475 USP49Q70CQ1 688 aa11.48□□□□□ -0.57
MCF2L-216ENST00000439475 HAUS6Q7Z4H7 955 aa11.48□□□□□ -0.57
MCF2L-216ENST00000439475 ADGRD2Q7Z7M1 963 aa11.48□□□□□ -0.57
MCF2L-216ENST00000439475 FAM178BQ8IXR5 827 aa11.48□□□□□ -0.57
MCF2L-216ENST00000439475 COLGALT2Q8IYK4 626 aa11.48□□□□□ -0.57
MCF2L-216ENST00000439475 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.48□□□□□ -0.57
MCF2L-216ENST00000439475 ADAMTS19Q8TE59 1207 aa11.48□□□□□ -0.57
MCF2L-216ENST00000439475 BICD1Q96G01 975 aa11.48□□□□□ -0.57
MCF2L-216ENST00000439475 ZFP42Q96MM3 310 aa11.48□□□□□ -0.57
MCF2L-216ENST00000439475 ACAP3Q96P50 834 aa11.48□□□□□ -0.57
MCF2L-216ENST00000439475 UHRF1Q96T88 793 aaPredicted RBP11.48□□□□□ -0.57
MCF2L-216ENST00000439475 REEP2Q9BRK0 252 aa11.48□□□□□ -0.57
MCF2L-216ENST00000439475 TARS2Q9BW92 718 aaKnown RBP11.48□□□□□ -0.57
MCF2L-216ENST00000439475 EMILIN2Q9BXX0 1053 aa11.48□□□□□ -0.57
MCF2L-216ENST00000439475 FAM13BQ9NYF5 915 aa11.48□□□□□ -0.57
MCF2L-216ENST00000439475 GDAQ9Y2T3 454 aa11.48□□□□□ -0.57
MCF2L-216ENST00000439475 PRG3Q9Y2Y8 225 aaPredicted RBP11.48□□□□□ -0.57
MCF2L-216ENST00000439475 TCF20Q9UGU0 1960 aaKnown RBP11.48□□□□□ -0.57
MCF2L-216ENST00000439475 GRXCR2A6NFK2 248 aa11.47□□□□□ -0.57
MCF2L-216ENST00000439475 TTLL13PA6NNM8 815 aa11.47□□□□□ -0.57
MCF2L-216ENST00000439475 H3BQ06 376 aaPredicted RBP11.47□□□□□ -0.57
MCF2L-216ENST00000439475 PER2O15055 1255 aa11.47□□□□□ -0.57
MCF2L-216ENST00000439475 TADA2AO75478 443 aa11.47□□□□□ -0.57
MCF2L-216ENST00000439475 TOM1L1O75674 476 aa11.47□□□□□ -0.57
MCF2L-216ENST00000439475 RECQL4O94761 1208 aa11.47□□□□□ -0.57
MCF2L-216ENST00000439475 MAPTP10636 758 aaKnown RBP11.47□□□□□ -0.57
MCF2L-216ENST00000439475 GRM5P41594 1212 aa11.47□□□□□ -0.57
MCF2L-216ENST00000439475 ZNF131P52739 623 aa11.47□□□□□ -0.57
MCF2L-216ENST00000439475 NCKAP1LP55160 1127 aa11.47□□□□□ -0.57
MCF2L-216ENST00000439475 DSC1Q08554 894 aa11.47□□□□□ -0.57
MCF2L-216ENST00000439475 TUSC3Q13454 348 aa11.47□□□□□ -0.57
MCF2L-216ENST00000439475 KYAT1Q16773 422 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms