RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 DPY19L2P1Q6NXN4 242 aa9.21□□□□□ -0.93
HPS4-206ENST00000439453 TMEM179Q6ZVK1 233 aa9.21□□□□□ -0.93
HPS4-206ENST00000439453 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.21□□□□□ -0.93
HPS4-206ENST00000439453 STK38LQ9Y2H1 464 aa9.21□□□□□ -0.93
HPS4-206ENST00000439453 SNX24Q9Y343 169 aa9.21□□□□□ -0.93
HPS4-206ENST00000439453 RBBP6Q7Z6E9 1792 aaKnown RBP9.21□□□□□ -0.93
HPS4-206ENST00000439453 FAM187AA6NFU0 413 aa9.21□□□□□ -0.94
HPS4-206ENST00000439453 KLRF2D3W0D1 207 aa9.21□□□□□ -0.94
HPS4-206ENST00000439453 LUC7L3O95232 432 aaKnown RBP9.21□□□□□ -0.94
HPS4-206ENST00000439453 UCHL3P15374 230 aa9.21□□□□□ -0.94
HPS4-206ENST00000439453 COPB2P35606 906 aa9.21□□□□□ -0.94
HPS4-206ENST00000439453 HMGCS2P54868 508 aa9.21□□□□□ -0.94
HPS4-206ENST00000439453 NPEPPSP55786 919 aa9.21□□□□□ -0.94
HPS4-206ENST00000439453 MKRN4PQ13434 485 aaPredicted RBP9.21□□□□□ -0.94
HPS4-206ENST00000439453 PPP2R5EQ16537 467 aa9.21□□□□□ -0.94
HPS4-206ENST00000439453 ANKRD20A2Q5SQ80 823 aa9.21□□□□□ -0.94
HPS4-206ENST00000439453 ANKRD20A1Q5TYW2 823 aa9.21□□□□□ -0.94
HPS4-206ENST00000439453 ANKRD20A3Q5VUR7 823 aa9.21□□□□□ -0.94
HPS4-206ENST00000439453 ZDHHC24Q6UX98 284 aa9.21□□□□□ -0.94
HPS4-206ENST00000439453 CROCCP2Q86T23 111 aa9.21□□□□□ -0.94
HPS4-206ENST00000439453 SPDYE1Q8NFV5 336 aaPredicted RBP9.21□□□□□ -0.94
HPS4-206ENST00000439453 GLG1Q92896 1179 aa9.21□□□□□ -0.94
HPS4-206ENST00000439453 IFT74Q96LB3 600 aa9.21□□□□□ -0.94
HPS4-206ENST00000439453 LZTS2Q9BRK4 669 aa9.21□□□□□ -0.94
HPS4-206ENST00000439453 MOV10L1Q9BXT6 1211 aaKnown RBP9.21□□□□□ -0.94
HPS4-206ENST00000439453 RAB34Q9BZG1 259 aa9.21□□□□□ -0.94
HPS4-206ENST00000439453 ARHGEF3Q9NR81 526 aa9.21□□□□□ -0.94
HPS4-206ENST00000439453 ADAM22Q9P0K1 906 aa9.21□□□□□ -0.94
HPS4-206ENST00000439453 PLXNA1Q9UIW2 1896 aa9.21□□□□□ -0.94
HPS4-206ENST00000439453 ATP8B3O60423 1300 aa9.21□□□□□ -0.94
HPS4-206ENST00000439453 A6NHS1 94 aa9.21□□□□□ -0.94
HPS4-206ENST00000439453 SUN1O94901 812 aa9.21□□□□□ -0.94
HPS4-206ENST00000439453 ATP2A2P16615 1042 aaKnown RBP9.21□□□□□ -0.94
HPS4-206ENST00000439453 PRKCIP41743 596 aa9.21□□□□□ -0.94
HPS4-206ENST00000439453 MSH2P43246 934 aa9.21□□□□□ -0.94
HPS4-206ENST00000439453 LBX1P52954 281 aa9.21□□□□□ -0.94
HPS4-206ENST00000439453 LACTBP83111 547 aaPredicted RBP9.21□□□□□ -0.94
HPS4-206ENST00000439453 ADAM9Q13443 819 aa9.21□□□□□ -0.94
HPS4-206ENST00000439453 PRPF4BQ13523 1007 aaKnown RBP9.21□□□□□ -0.94
HPS4-206ENST00000439453 ADAT2Q7Z6V5 191 aaKnown RBP9.21□□□□□ -0.94
HPS4-206ENST00000439453 GBP7Q8N8V2 638 aaPredicted RBP9.21□□□□□ -0.94
HPS4-206ENST00000439453 UHMK1Q8TAS1 419 aaKnown RBP9.21□□□□□ -0.94
HPS4-206ENST00000439453 FBXO25Q8TCJ0 367 aa9.21□□□□□ -0.94
HPS4-206ENST00000439453 EPS8L3Q8TE67 593 aaKnown RBP9.21□□□□□ -0.94
HPS4-206ENST00000439453 PARD3BQ8TEW8 1205 aa9.21□□□□□ -0.94
HPS4-206ENST00000439453 ZBTB10Q96DT7 871 aa9.21□□□□□ -0.94
HPS4-206ENST00000439453 YIPF3Q9GZM5 350 aa9.21□□□□□ -0.94
HPS4-206ENST00000439453 KIAA1683Q9H0B3 1180 aa9.21□□□□□ -0.94
HPS4-206ENST00000439453 CCDC113Q9H0I3 377 aa9.21□□□□□ -0.94
HPS4-206ENST00000439453 STMN4Q9H169 189 aaPredicted RBP9.21□□□□□ -0.94
HPS4-206ENST00000439453 TMEM260Q9NX78 707 aa9.21□□□□□ -0.94
HPS4-206ENST00000439453 AGTPBP1Q9UPW5 1226 aa9.21□□□□□ -0.94
HPS4-206ENST00000439453 SLC45A1Q9Y2W3 748 aa9.21□□□□□ -0.94
HPS4-206ENST00000439453 SLC37A4O43826 429 aa9.2□□□□□ -0.94
HPS4-206ENST00000439453 LINGO3P0C6S8 592 aa9.2□□□□□ -0.94
HPS4-206ENST00000439453 ANXA13P27216 316 aa9.2□□□□□ -0.94
HPS4-206ENST00000439453 ABL2P42684 1182 aa9.2□□□□□ -0.94
HPS4-206ENST00000439453 CCNG1P51959 295 aa9.2□□□□□ -0.94
HPS4-206ENST00000439453 ATP11AP98196 1134 aa9.2□□□□□ -0.94
HPS4-206ENST00000439453 PDIA5Q14554 519 aa9.2□□□□□ -0.94
HPS4-206ENST00000439453 UBAP2Q5T6F2 1119 aaKnown RBP9.2□□□□□ -0.94
HPS4-206ENST00000439453 U2AF1L4Q8WU68 220 aaKnown RBP9.2□□□□□ -0.94
HPS4-206ENST00000439453 FAM167BQ9BTA0 163 aa9.2□□□□□ -0.94
HPS4-206ENST00000439453 SEMA4AQ9H3S1 761 aa9.2□□□□□ -0.94
HPS4-206ENST00000439453 ERVK-5Q9HDB9 667 aa9.2□□□□□ -0.94
HPS4-206ENST00000439453 INTUQ9ULD6 942 aa9.2□□□□□ -0.94
HPS4-206ENST00000439453 RPTORQ8N122 1335 aa9.2□□□□□ -0.94
HPS4-206ENST00000439453 ANKRD33BA6NCL7 494 aa9.2□□□□□ -0.94
HPS4-206ENST00000439453 PDHXO00330 501 aa9.2□□□□□ -0.94
HPS4-206ENST00000439453 KIAA0391O15091 583 aaKnown RBP9.2□□□□□ -0.94
HPS4-206ENST00000439453 DDX3YO15523 660 aaKnown RBP9.2□□□□□ -0.94
HPS4-206ENST00000439453 CA12O43570 354 aa9.2□□□□□ -0.94
HPS4-206ENST00000439453 EVI5O60447 810 aa9.2□□□□□ -0.94
HPS4-206ENST00000439453 SLCO1A2P46721 670 aa9.2□□□□□ -0.94
HPS4-206ENST00000439453 ECM1Q16610 540 aa9.2□□□□□ -0.94
HPS4-206ENST00000439453 DCAF12L1Q5VU92 463 aa9.2□□□□□ -0.94
HPS4-206ENST00000439453 VPS36Q86VN1 386 aa9.2□□□□□ -0.94
HPS4-206ENST00000439453 JAMLQ86YT9 394 aa9.2□□□□□ -0.94
HPS4-206ENST00000439453 REXO1Q8N1G1 1221 aaKnown RBP9.2□□□□□ -0.94
HPS4-206ENST00000439453 TMEM109Q9BVC6 243 aa9.2□□□□□ -0.94
HPS4-206ENST00000439453 SPZ1Q9BXG8 430 aa9.2□□□□□ -0.94
HPS4-206ENST00000439453 KCTD10Q9H3F6 313 aa9.2□□□□□ -0.94
HPS4-206ENST00000439453 FGFR1OP2Q9NVK5 253 aa9.2□□□□□ -0.94
HPS4-206ENST00000439453 PNMA3Q9UL41 463 aa9.2□□□□□ -0.94
HPS4-206ENST00000439453 DIS3Q9Y2L1 958 aaKnown RBP9.2□□□□□ -0.94
HPS4-206ENST00000439453 DDX3XO00571 662 aaKnown RBP eCLIP9.2□□□□□ -0.949e-7■■■□□ 14.6
HPS4-206ENST00000439453 DRG2P55039 364 aaKnown RBP9.2□□□□□ -0.94
HPS4-206ENST00000439453 TAF11Q15544 211 aa9.2□□□□□ -0.94
HPS4-206ENST00000439453 BTNL9Q6UXG8 535 aa9.2□□□□□ -0.94
HPS4-206ENST00000439453 TAOK1Q7L7X3 1001 aa9.2□□□□□ -0.94
HPS4-206ENST00000439453 ZC3H3Q8IXZ2 948 aaKnown RBP9.2□□□□□ -0.94
HPS4-206ENST00000439453 NEDD1Q8NHV4 660 aa9.2□□□□□ -0.94
HPS4-206ENST00000439453 DYDC1Q8WWB3 177 aa9.2□□□□□ -0.94
HPS4-206ENST00000439453 CEP95Q96GE4 821 aa9.2□□□□□ -0.94
HPS4-206ENST00000439453 CCDC17Q96LX7 622 aa9.2□□□□□ -0.94
HPS4-206ENST00000439453 TMEM47Q9BQJ4 181 aa9.2□□□□□ -0.94
HPS4-206ENST00000439453 BMP2KQ9NSY1 1161 aaPredicted RBP9.2□□□□□ -0.94
HPS4-206ENST00000439453 ZFATQ9P243 1243 aa9.2□□□□□ -0.94
HPS4-206ENST00000439453 DBR1Q9UK59 544 aaKnown RBP9.2□□□□□ -0.94
HPS4-206ENST00000439453 TMX2Q9Y320 296 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms